EY728906
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXPB3_ORYSJ (Expansin-B3 OS=Oryza sativa subsp. japonica GN=EXPB3 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.846e-12 Identity = 64/223 (28.70%), Postives = 96/223 (43.05%), Query Frame = 2 Query: 89 WINAHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG--SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNG-GIRFTINGHS---YFNLVLITNVGGAGDVRAVSI-KGSRTKWQPMSRNWGP--KLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWS 703 W A AT+Y G N + + T+ + +F +G CG+C+QI C N P C ++I+T N+ P +HFDLS F +A+ AGI+ + ++RV C G + F + S YF VL+ G GDV V + + + W PM +WG +L SN L S +T G +V+ V P W+ Sbjct: 42 WEVARATWYGAPTGAGPDDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCVNHPA-CSGNPETVIITDMNYYPVS------KYHFDLSGTAFGAMAKPGQNDQLRHAGIIDIQFKRVPCNFPGLKVTFHVEEGSNPVYF-AVLVEYEDGDGDVVQVDLMEANSQSWTPMRESWGSIWRLDSNHRLTA-PFSLRITNESGKQLVASQVIPANWA 255
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXLB1_ARATH (Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.846e-12 Identity = 61/219 (27.85%), Postives = 99/219 (45.21%), Query Frame = 2 Query: 89 WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGG--WCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNG-GIRFTINGHSY---FNLVLITNVGGAGDVRAVSIKGSRTK-WQPMSRNWGPKLASNSYLNGQ-SLSFVVTTSYG-HSVVSYNVAPPKWSFGQTY 718 ++N+ AT+Y YG + +S L+NNG CGAC+Q+ C P C + V AT+ G + P + +++P ++ Y G+V V Y+R+ C+ G + + I+ SY + +L+ VGG D+ AV + K W+ M R +G + G +L F+V S G + + S N P W+ G TY Sbjct: 27 FVNSRATYYGSPDCKANPRGHCGYGEFGRDINNGEVSGVSWRLWNNGTGCGACYQVRCKIPPH-CSEEGVYVVATDSGEGDGTDFILSPKAYGRMARPGTEN-QLYSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYLAILVLYVGGVNDILAVEVWQEDCKEWRRMRRVFGAVHDLQNPPRGTLTLRFLVYGSAGINWIQSPNAIPADWTAGATY 243
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXPB9_ORYSJ (Expansin-B9 OS=Oryza sativa subsp. japonica GN=EXPB9 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11 Identity = 58/222 (26.13%), Postives = 98/222 (44.14%), Query Frame = 2 Query: 89 WINAHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG--SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA-------QYRAGIVPVIYRRVRCKRNGGIRFTIN----GHSYFNLVLITNVGGAGDVRAVSI-KGSRTKWQPMSRNWGP--KLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKW 700 W+ A AT+Y G N+ Y + + +F +G CG+C+++ C P C + ++ +T N+ P + HFD S F +A +AGI+ + +RRVRCK GG + T + + + VL+ V GDV + + + W+PM +WG ++ + + L S VTT G S+++ +V P W Sbjct: 43 WLPARATWYGQPYGSGSTDNGGACGIKNVNLPPYNGMISCGNVPIFKDGRGCGSCYEVKC-EQPAACSKQPVTVFITDMNYEPISAY------HFDFSGKAFGAMACPGKETELRKAGIIDMQFRRVRCKYPGGQKVTFHVEKGSNPNYLAVLVKFVADDGDVIQMDLQEAGLPAWRPMKLSWGAIWRMDTATPLKA-PFSIRVTTESGKSLIAKDVIPVNW 256
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: MPAC1_CYNDA (Major pollen allergen Cyn d 1 OS=Cynodon dactylon GN=CYND1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.256e-11 Identity = 61/234 (26.07%), Postives = 102/234 (43.59%), Query Frame = 2 Query: 80 YGG-WINAHATFYXXXXXXXXXXXXXX---YGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNGGIRFTIN----GHSYFNLVLITNVGGAGDVRAVSIK-GSRTKWQPMSRNWGP--KLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGR 727 YG W+ A ATFY Y ++ + TA + +F +GL C AC++I C +P C ++V T+ + +HFDLS F +A+ +AG + + +RRV+CK G + T + + ++ +L+ G G++ AV IK ++ PM +WG ++ L G S +T+ G +V +V P W YT + Sbjct: 14 YGSKWLEARATFYGSNPRGAAPDDHGGACGYKDVDKPPFDGMTACGNEPIFKDGLGCRACYEIKC-KEPVECSGEPVLVKITD----KNYEHIAAYHFDLSGKAFGAMAKKGQEDKLRKAGELTLQFRRVKCKYPSGTKITFHIEKGSNDHYLALLVKYAAGDGNIVAVDIKPRDSDEFIPMKSSWGAIWRIDPKKPLKG-PFSIRLTSEGGAHLVQDDVIPANWKPDTVYTSK 241
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXPB8_ORYSJ (Expansin-B8 OS=Oryza sativa subsp. japonica GN=EXPB8 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.252e-11 Identity = 59/230 (25.65%), Postives = 96/230 (41.74%), Query Frame = 2 Query: 68 SVQGYGGWINAHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG-SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNG---GIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRT---KWQPMSRNWGP--KLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWS 703 ++ G W NA AT+Y G + + T+ + L+ G CG+C+++ C +P ++ +T N+ P +HFDLS F +A+ RAGI+ V + RV C+ G G + VL+ G GDV V +K + +W PM +WG +L SN L S + + G ++V+ +V P W+ Sbjct: 41 AIGGAAAWGNAKATWYGQPNGAGAADNGGACGFKKVNQYPFMGMTSCGNQPLYKGGKGCGSCYRVRCNRNPACSGNAQTVAITDMNYFPLS------QYHFDLSGIAFGRLAKPGRADDLRRAGIIDVQFARVPCEFPGLKVGFHVEEGSSPVYLAVLVEYENGDGDVAQVDLKEAGAGGGRWTPMRESWGSVWRLDSNHRLRA-PFSIRIRSDSGKTLVAPDVIPLNWT 263 The following BLAST results are available for this feature:
BLAST of EY728906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728906 ID=EY728906; Name=EY728906; organism=Citrus sinensis; type=EST; length=883bpback to top |