EY728898
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728898 vs. ExPASy Swiss-Prot
Match: RL18_ACAM1 (50S ribosomal protein L18 OS=Acaryochloris marina (strain MBIC 11017) GN=rplR PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 6.499e-27 Identity = 38/69 (55.07%), Postives = 50/69 (72.46%), Query Frame = 3
Query: 222 TKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEELDYSSGPT 428
T+R+ +RH R+R+K+ GT ERPRL VFRSN+H+Y QVIDD + HTLA+AST + +L SSG T
Sbjct: 4 TRRDATRSRHQRVRRKVVGTAERPRLAVFRSNQHIYAQVIDDAQQHTLAAAST----VESDLKSSSGAT 68 HSP 2 Score: 63.5438 bits (153), Expect = 6.499e-27 Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 2
Query: 428 DFAKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREHGLQF 574
D + VG+++A+ +EKGI V FDRGG YHGR++ALADAARE GL+F
Sbjct: 70 DASTAVGKLVAERAIEKGIKAVVFDRGGNLYHGRVKALADAAREAGLEF 118
BLAST of EY728898 vs. ExPASy Swiss-Prot
Match: RL18_STACT (50S ribosomal protein L18 OS=Staphylococcus carnosus (strain TM300) GN=rplR PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.499e-27 Identity = 33/49 (67.35%), Postives = 41/49 (83.67%), Query Frame = 2
Query: 428 DFAKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREHGLQF 574
+ + KVGE IAK +KGIT++ FDRGGY YHGR++ALADAARE+GLQF
Sbjct: 72 ELSSKVGEAIAKKAADKGITEIVFDRGGYLYHGRVKALADAARENGLQF 120 HSP 2 Score: 68.1662 bits (165), Expect = 6.499e-27 Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 3
Query: 225 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEE 404
K + R RH+R+R + GT ++PRL V+RSNKH+Y Q+IDDTK TL AST K E
Sbjct: 7 KNKVRLKRHARVRSNLSGTAQKPRLNVYRSNKHIYAQIIDDTKGVTLVQASTQDKDFENE 66
BLAST of EY728898 vs. ExPASy Swiss-Prot
Match: RL18_THETN (50S ribosomal protein L18 OS=Thermoanaerobacter tengcongensis GN=rplR PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.431e-26 Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 3
Query: 222 TKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISE 401
++ E R RH R+RKK+ GTPERPRL V++S KH+Y Q+IDDTK HTL SAST+ + +
Sbjct: 6 SRNELRKKRHLRVRKKVFGTPERPRLNVYKSLKHIYAQIIDDTKGHTLVSASTLDPELRD 65 HSP 2 Score: 65.855 bits (159), Expect = 2.431e-26 Identity = 32/47 (68.09%), Postives = 36/47 (76.60%), Query Frame = 2
Query: 434 AKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREHGLQF 574
AK VGE+IAK LEKGI V FDRGGY YHG ++ LADAAR+ GL F
Sbjct: 75 AKLVGELIAKRALEKGIKDVVFDRGGYLYHGVVKELADAARQAGLNF 121
BLAST of EY728898 vs. ExPASy Swiss-Prot
Match: RL18_MACCJ (50S ribosomal protein L18 OS=Macrococcus caseolyticus (strain JCSC5402) GN=rplR PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.165e-26 Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = 3
Query: 225 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEE 404
K + R RH+R+R K+ GT ERPRL V+RSNKH+Y QVIDD K TLA AST K + E
Sbjct: 7 KNKVRMKRHARVRSKLAGTTERPRLNVYRSNKHIYAQVIDDVKGVTLAQASTQDKNLGLE 66 HSP 2 Score: 69.3218 bits (168), Expect = 3.165e-26 Identity = 31/47 (65.96%), Postives = 39/47 (82.98%), Query Frame = 2
Query: 434 AKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREHGLQF 574
A KVGE +AK +EKG+ V FDRGGY +HGR++ALADAARE+GL+F
Sbjct: 74 AAKVGEAVAKLAVEKGVKAVVFDRGGYLFHGRVKALADAARENGLEF 120
BLAST of EY728898 vs. ExPASy Swiss-Prot
Match: RL18_BACP2 (50S ribosomal protein L18 OS=Bacillus pumilus (strain SAFR-032) GN=rplR PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.165e-26 Identity = 32/47 (68.09%), Postives = 40/47 (85.11%), Query Frame = 2
Query: 434 AKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREHGLQF 574
A KVGE++AK +EKGI+ V FDRGGY YHGR++ALA+AARE GL+F
Sbjct: 74 ATKVGELVAKRAVEKGISNVVFDRGGYLYHGRVKALAEAAREAGLKF 120 HSP 2 Score: 69.3218 bits (168), Expect = 3.165e-26 Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 3
Query: 222 TKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEE 404
+K R RH+R+R K+ GT ERPRL VFRSNK++Y QVIDD TL SAST+ K + E
Sbjct: 6 SKNATRLKRHARVRAKLSGTAERPRLNVFRSNKNIYAQVIDDVNGVTLVSASTLDKDLKIE 66
BLAST of EY728898 vs. ExPASy Swiss-Prot
Match: RL18_CLOBB (50S ribosomal protein L18 OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=rplR PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.120e-26 Identity = 32/58 (55.17%), Postives = 43/58 (74.14%), Query Frame = 3
Query: 225 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPIS 398
K+ RT RH R+RKK+ GTP+RPRL VFRS K++YVQ+IDD T+ +AS++ K S
Sbjct: 7 KKASRTKRHLRVRKKVFGTPDRPRLSVFRSEKNIYVQIIDDVNAVTIVAASSLDKEFS 64 HSP 2 Score: 68.1662 bits (165), Expect = 4.120e-26 Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 2
Query: 434 AKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREHGLQF 574
AK VG +AK +EKGIT+V FDRGGY YHGR+Q LA+ ARE GL+F
Sbjct: 74 AKLVGAAVAKKAIEKGITEVVFDRGGYVYHGRVQELAEGAREAGLKF 120
BLAST of EY728898 vs. ExPASy Swiss-Prot
Match: RL18_BACHK (50S ribosomal protein L18 OS=Bacillus thuringiensis subsp. konkukian GN=rplR PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.120e-26 Identity = 32/47 (68.09%), Postives = 39/47 (82.98%), Query Frame = 2
Query: 434 AKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREHGLQF 574
A KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF
Sbjct: 74 ATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120 HSP 2 Score: 69.3218 bits (168), Expect = 4.120e-26 Identity = 33/58 (56.90%), Postives = 41/58 (70.69%), Query Frame = 3
Query: 225 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPIS 398
K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K ++
Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDKDLA 64
BLAST of EY728898 vs. ExPASy Swiss-Prot
Match: RL18_BACCZ (50S ribosomal protein L18 OS=Bacillus cereus (strain ZK / E33L) GN=rplR PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.120e-26 Identity = 32/47 (68.09%), Postives = 39/47 (82.98%), Query Frame = 2
Query: 434 AKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREHGLQF 574
A KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF
Sbjct: 74 ATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120 HSP 2 Score: 69.3218 bits (168), Expect = 4.120e-26 Identity = 33/58 (56.90%), Postives = 41/58 (70.69%), Query Frame = 3
Query: 225 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPIS 398
K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K ++
Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDKDLA 64
BLAST of EY728898 vs. ExPASy Swiss-Prot
Match: RL18_BACCR (50S ribosomal protein L18 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rplR PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.120e-26 Identity = 32/47 (68.09%), Postives = 39/47 (82.98%), Query Frame = 2
Query: 434 AKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREHGLQF 574
A KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF
Sbjct: 74 ATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120 HSP 2 Score: 69.3218 bits (168), Expect = 4.120e-26 Identity = 33/58 (56.90%), Postives = 41/58 (70.69%), Query Frame = 3
Query: 225 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPIS 398
K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K ++
Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDKDLA 64
BLAST of EY728898 vs. ExPASy Swiss-Prot
Match: RL18_BACCQ (50S ribosomal protein L18 OS=Bacillus cereus (strain Q1) GN=rplR PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.120e-26 Identity = 32/47 (68.09%), Postives = 39/47 (82.98%), Query Frame = 2
Query: 434 AKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREHGLQF 574
A KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF
Sbjct: 74 ATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120 HSP 2 Score: 69.3218 bits (168), Expect = 4.120e-26 Identity = 33/58 (56.90%), Postives = 41/58 (70.69%), Query Frame = 3
Query: 225 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPIS 398
K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K ++
Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDKDLA 64 The following BLAST results are available for this feature:
BLAST of EY728898 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728898 ID=EY728898; Name=EY728898; organism=Citrus sinensis; type=EST; length=917bpback to top |