EY728893

Overview
NameEY728893
Unique NameEY728893
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: NEPI_SHIF8 (Purine ribonucleoside efflux pump nepI OS=Shigella flexneri serotype 5b (strain 8401) GN=nepI PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.893e-15
Identity = 49/197 (24.87%), Postives = 88/197 (44.67%), Query Frame = -2
Query:    7 NWMSALMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGG 597
            +++  L+GWR  F   A++G+  +   +  LP L  E + +  +       P    G+IA+ +     FA +TY+ P + N +GF    +  +LL +G+A  +G   + F   RSV+  L   PL++  S  +   + +       +  +WG  F   P   S W+        E+   + VA+ Q+    G+  GG
Sbjct:  165 SFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFILKRSVKLALAGAPLILAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGG 361          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: NEPI_SHIBS (Purine ribonucleoside efflux pump nepI OS=Shigella boydii serotype 4 (strain Sb227) GN=nepI PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.893e-15
Identity = 49/197 (24.87%), Postives = 88/197 (44.67%), Query Frame = -2
Query:    7 NWMSALMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGG 597
            +++  L+GWR  F   A++G+  +   +  LP L  E + +  +       P    G+IA+ +     FA +TY+ P + N +GF    +  +LL +G+A  +G   + F   RSV+  L   PL++  S  +   + +       +  +WG  F   P   S W+        E+   + VA+ Q+    G+  GG
Sbjct:  165 SFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFILKRSVKLALAGAPLILAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGG 361          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: NEPI_ECOLI (Purine ribonucleoside efflux pump nepI OS=Escherichia coli (strain K12) GN=nepI PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.893e-15
Identity = 49/197 (24.87%), Postives = 88/197 (44.67%), Query Frame = -2
Query:    7 NWMSALMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGG 597
            +++  L+GWR  F   A++G+  +   +  LP L  E + +  +       P    G+IA+ +     FA +TY+ P + N +GF    +  +LL +G+A  +G   + F   RSV+  L   PL++  S  +   + +       +  +WG  F   P   S W+        E+   + VA+ Q+    G+  GG
Sbjct:  165 SFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFILKRSVKLALAGAPLILAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGG 361          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: NEPI_ECOBW (Purine ribonucleoside efflux pump nepI OS=Escherichia coli (strain K12 / BW2952) GN=nepI PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.893e-15
Identity = 49/197 (24.87%), Postives = 88/197 (44.67%), Query Frame = -2
Query:    7 NWMSALMGWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGG 597
            +++  L+GWR  F   A++G+  +   +  LP L  E + +  +       P    G+IA+ +     FA +TY+ P + N +GF    +  +LL +G+A  +G   + F   RSV+  L   PL++  S  +   + +       +  +WG  F   P   S W+        E+   + VA+ Q+    G+  GG
Sbjct:  165 SFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFILKRSVKLALAGAPLILAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGG 361          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_SALAR (Probable sugar efflux transporter OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=sotB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.779e-15
Identity = 54/195 (27.69%), Postives = 85/195 (43.59%), Query Frame = -2
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIG---TSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWRTTF    +  +  L+  + LLP+L  E +  +  LP  F  P      +   ++  AH+ AY+Y+ PF +N +G        LLL+ G AG++G+   G   N   +H  LLV + I        L    A   +   +L   WG           + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  165 GWRTTFFAIGMGALITLICLIKLLPKLPSEHSGSLKSLPLLFRRPALMSLYLLTAVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGN---QHASLLVSIAISLLVVCLLLLLPAADSEAHLALLSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALAGNQV 356          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_KLEP7 (Probable sugar efflux transporter OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=sotB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.779e-15
Identity = 55/194 (28.35%), Postives = 88/194 (45.36%), Query Frame = -2
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTL-LLVPLMIGTSTALFPYFATGMSGPVMLIAL-WGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWR TFL   L  +  L   + LLP L  E +  +  LP  F  P      I  +++  AH+ AY+Y+ PF +  +G  G     LLL+ G AG++G+   G   N+     + L + L++     L P  A+     +ML+++ WG           + +   AP   +  M LF  +F + I  G+  G Q+
Sbjct:  165 GWRMTFLAIGLGALATLACLVKLLPTLPSEHSGSLKSLPVLFRRPALVSVYILTVVVVTAHYTAYSYIEPFVQTVAGLSGNFATVLLLILGGAGIIGSILFGKLGNQHASGLISLAIALLLACLLLLLP--ASHNPQHLMLLSIFWGVAIMIIGLGMQVKVLASAPDATDVAMSLFSGIFNIGIGAGALVGSQV 356          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_KLEP3 (Probable sugar efflux transporter OS=Klebsiella pneumoniae (strain 342) GN=sotB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.779e-15
Identity = 57/195 (29.23%), Postives = 89/195 (45.64%), Query Frame = -2
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTA--LFPYFATGMSGPVMLIAL-WGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWR TFL   L  +  L   + LLP L  E +  +  LP  F  P      I  +++  AH+ AY+Y+ PF +  +G  G     LLL+ G AG++G+   G   N   +H   L+ + IG   A  L    A+  +  +ML+++ WG           + +   AP   +  M LF  +F + I  G+  G Q+
Sbjct:  165 GWRMTFLAIGLGALATLACLVKLLPTLPSEHSGSLKSLPVLFRRPALVSVYILTVVVVTAHYTAYSYIEPFVQTVAGLSGNFATVLLLILGGAGIIGSILFGKLGN---QHASGLISIAIGLLLACLLLLLPASDNAHHLMLLSIFWGVAIMIIGLGMQVKVLASAPDATDVAMSLFSGIFNIGIGAGALVGSQV 356          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_SHIFL (Probable sugar efflux transporter OS=Shigella flexneri GN=sotB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.935e-15
Identity = 52/192 (27.08%), Postives = 83/192 (43.23%), Query Frame = -2
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWR TF    +  +  LL  + LLP L  E +  +  LP  F  P      +  +++  AH+ AY+Y+ PF +N +GF      +LLLL G AG++G+   G   N+     +     ++    AL    A       +L   WG           + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  165 GWRMTFFAIGIGALVTLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_SHIF8 (Probable sugar efflux transporter OS=Shigella flexneri serotype 5b (strain 8401) GN=sotB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.935e-15
Identity = 52/192 (27.08%), Postives = 83/192 (43.23%), Query Frame = -2
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTALFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWR TF    +  +  LL  + LLP L  E +  +  LP  F  P      +  +++  AH+ AY+Y+ PF +N +GF      +LLLL G AG++G+   G   N+     +     ++    AL    A       +L   WG           + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  165 GWRMTFFAIGIGALVTLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356          
BLAST of EY728893 vs. ExPASy Swiss-Prot
Match: SOTB_ESCF3 (Probable sugar efflux transporter OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=sotB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.935e-15
Identity = 55/195 (28.21%), Postives = 85/195 (43.59%), Query Frame = -2
Query:    1 GWRTTFLVTALVGIPVLLAQMFLLPRLEPEKAIRISDLPAXFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGLMGNFFAGFAANRSVRHTLLLVPLMIGTSTA---LFPYFATGMSGPVMLIALWGFPFGPFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 576
            GWRTTFL   +     LL  + LLP L  E +  +  LP  F  P      +  +++  AH+ AY+Y+ PF +N +G        LLL+ G AG++G+   G   N    H  +LV + I    A   L    +   +   +L   WG           + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  165 GWRTTFLAIGVGAFLTLLCLIKLLPLLPSEHSGSLKSLPVLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGLSANFATVLLLILGGAGIIGSVIFGKLGN---NHASVLVSVAIALLMACLLLLMPASVSETHLAILSIFWGIAIMMIGLGMQVKVLALAPDATDVAMSLFSGIFNIGIGAGALVGNQV 356          
The following BLAST results are available for this feature:
BLAST of EY728893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
NEPI_SHIF82.893e-1524.87Purine ribonucleoside efflux pump nepI OS=Shigella... [more]
NEPI_SHIBS2.893e-1524.87Purine ribonucleoside efflux pump nepI OS=Shigella... [more]
NEPI_ECOLI2.893e-1524.87Purine ribonucleoside efflux pump nepI OS=Escheric... [more]
NEPI_ECOBW2.893e-1524.87Purine ribonucleoside efflux pump nepI OS=Escheric... [more]
SOTB_SALAR3.779e-1527.69Probable sugar efflux transporter OS=Salmonella ar... [more]
SOTB_KLEP73.779e-1528.35Probable sugar efflux transporter OS=Klebsiella pn... [more]
SOTB_KLEP33.779e-1529.23Probable sugar efflux transporter OS=Klebsiella pn... [more]
SOTB_SHIFL4.935e-1527.08Probable sugar efflux transporter OS=Shigella flex... [more]
SOTB_SHIF84.935e-1527.08Probable sugar efflux transporter OS=Shigella flex... [more]
SOTB_ESCF34.935e-1528.21Probable sugar efflux transporter OS=Escherichia f... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-A01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728893 ID=EY728893; Name=EY728893; organism=Citrus sinensis; type=EST; length=892bp
AATCTGCCCGCCAAAGAACGAGCCCACGGCAATGATCACCTGGAACAACG
CGACGAACAGCGGCATGCCACGTTCCACATCCTTGGGCGCCACCACAAAC
ATCCAGATACTCGCGCAGGCCGGGAAGGGGCCGAAGGGGAAGCCCCACAG
TGCGATCAGCATCACGGGGCCGCTCATGCCGGTGGCGAAATAAGGGAACA
GGGCAGTGCTGGTGCCGATCATCAGGGGCACCAACAACAAGGTGTGGCGC
ACGCTGCGGTTGGCGGCGAAACCGGCGAAAAAGTTGCCCATTAAGCCGGC
CACGCCGTATAACAGCAGCAGCGAGCCAATGGTCGGGCCGTCGAAACCGG
AGCTGTTTTTGAAGAACGGGGCGACATATGTGTATGCGGCAAAATGCGCG
AGGCCGATCAGCAGCACGGCGATCAAGCCGACCCGGGCTTGTGGGTTGAT
GAACANGGCCGGCAGGTCGCTGATGCGGATGGCTTTTTCCGGTTCGAGGC
GCGGCAGCAGGAACATCTGCGCCAGCAGTACCGGGATGCCCACCAGCGCG
GTGACGAGGAAGGTCGTGCGCCACCCCATCAGGGCGCTCATCCAGTTGCC
GAGGGGTACGCCGAGGAGGGGTGGCAGGGTCCCGCCCACCATGAAGATCA
AGGTGCGCTTGCTGAGGCCACTCGCTTGGGGGCCAGACGGGGGCCCTAGA
AGGTCCCAGTGTACGTACTCCGGGTTGCACGGCCTGAGGTTTGTGTGGCG
TGCCCTCAGTTCGATTTGCGGGCGCTGGTGTGACGTCTGCTGGAGCGGGG
AAAGCGCGGAGGGGCGCCGCGGTGGAGCGTGCGCGCAGGCCCGGCTGCGC
GGGGAGGGGAAGTGAAGGCGGCTCCCAAGGGGGCTGGGATCG
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