EY728824

Overview
NameEY728824
Unique NameEY728824
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728824 vs. ExPASy Swiss-Prot
Match: ADH1B_PANTR (Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH1B PE=2 SV=3)

HSP 1 Score: 212.616 bits (540), Expect = 2.408e-54
Identity = 107/199 (53.77%), Postives = 137/199 (68.84%), Query Frame = 1
Query:   76 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVXSVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLXQVCVLSCGISTGFGATVNVAKPKKGXTVANF 672
            TAG+VI+CKAAV WE  KP  IE+VEVAPP+  EVR+K++   +C TD +       TPL P I GHEA GIV SVGEGVT ++PGD V+P+FT +C +C  C + ESN C    +   RG +  DG  RF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL +VC++ CG STG+G+ VNVAK   G T A F
Sbjct:    3 TAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPL-PAILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTL-QDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVF 199          
BLAST of EY728824 vs. ExPASy Swiss-Prot
Match: ADH1_GADCA (Alcohol dehydrogenase 1 OS=Gadus callarias PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.107e-54
Identity = 105/199 (52.76%), Postives = 135/199 (67.84%), Query Frame = 1
Query:   76 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVXSVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLXQVCVLSCGISTGFGATVNVAKPKKGXTVANF 672
            T G+VI+CKAAVAWEA KPLVIEE+EV  P  NE+R+KI+ T +CHTD+Y          FP + GHE  GIV SVG GVT+ QPG+ V+P+F  +C EC  C S ++N C     N    VM +  ++RF+ KG+ +  F+GTSTFS+YTV +   VAKI+P+APL  VC+L CG+STGFGA VN AK + G T A F
Sbjct:    2 TVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM-SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVF 199          
BLAST of EY728824 vs. ExPASy Swiss-Prot
Match: ADH1B_HUMAN (Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B PE=1 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 4.107e-54
Identity = 107/199 (53.77%), Postives = 137/199 (68.84%), Query Frame = 1
Query:   76 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVXSVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLXQVCVLSCGISTGFGATVNVAKPKKGXTVANF 672
            TAG+VI+CKAAV WE  KP  IE+VEVAPP+  EVR+K++   +C TD +       TPL P I GHEA GIV SVGEGVT ++PGD V+P+FT +C +C  C + ESN C    +   RG +  DG  RF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL +VC++ CG STG+G+ VNVAK   G T A F
Sbjct:    3 TAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTL-QDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVF 199          
BLAST of EY728824 vs. ExPASy Swiss-Prot
Match: ADH1_ALLMI (Alcohol dehydrogenase 1 OS=Alligator mississippiensis PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 9.150e-54
Identity = 105/199 (52.76%), Postives = 135/199 (67.84%), Query Frame = 1
Query:   76 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVXSVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLXQVCVLSCGISTGFGATVNVAKPKKGXTVANF 672
            TAG+VI+CKAA+ WE  KP  IEE+EVAPP+ +EVR+KIL T +C +D +        PL P I GHEA G+V S GEGVT L+PGD V+P+F  +C EC  C     N+C    + +  G+M  DG SRF+ KGK I+HF+GTSTF+EYTV H   VA+I+ AAPL +VC++ CG STG+GA V  AK + G T A F
Sbjct:    2 TAGKVIKCKAAITWEIKKPFSIEEIEVAPPKAHEVRIKILATGICRSDDHVTAGLLTMPL-PMILGHEAAGVVESTGEGVTSLKPGDKVIPLFVPQCGECMPCLKSNGNLCIRNDLGSPSGLMA-DGTSRFTCKGKDIHHFIGTSTFTEYTVVHETAVARIDAAAPLEKVCLIGCGFSTGYGAAVKDAKVEPGSTCAVF 198          
BLAST of EY728824 vs. ExPASy Swiss-Prot
Match: ADH1B_PAPHA (Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH1B PE=2 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 9.150e-54
Identity = 106/199 (53.27%), Postives = 136/199 (68.34%), Query Frame = 1
Query:   76 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVXSVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLXQVCVLSCGISTGFGATVNVAKPKKGXTVANF 672
            TAG+VI+CKAAV WE  KP  IE+VEVAPP+  EVR+K++   +C TD +       +PL P I GHEA GIV SVGEGVT ++PGD V+P+FT +C +C  C S E N C    ++  RG +  DG  RF+ +GKPI+HFVGTSTFS+YTV     VAKI+ A+PL +VC++ CG STG+G+ VNVAK   G   A F
Sbjct:    3 TAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVSPL-PAILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKSPEGNYCVKNDLSNPRGTL-QDGTRRFTCRGKPIHHFVGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSVCAVF 199          
BLAST of EY728824 vs. ExPASy Swiss-Prot
Match: ADH1E_HORSE (Alcohol dehydrogenase E chain OS=Equus caballus PE=1 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 1.195e-53
Identity = 107/199 (53.77%), Postives = 139/199 (69.85%), Query Frame = 1
Query:   76 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVXSVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLXQVCVLSCGISTGFGATVNVAKPKKGXTVANF 672
            TAG+VI+CKAAV WE  KP  IEEVEVAPP+ +EVR+K++ T +C +D +       TPL P I GHEA GIV S+GEGVT ++PGD V+P+FT +C +C  C   E N C    ++  RG M  DG SRF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL +VC++ CG STG+G+ V VAK  +G T A F
Sbjct:    3 TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVF 199          
BLAST of EY728824 vs. ExPASy Swiss-Prot
Match: ADH1G_HUMAN (Alcohol dehydrogenase 1C OS=Homo sapiens GN=ADH1C PE=1 SV=2)

HSP 1 Score: 208.764 bits (530), Expect = 3.477e-53
Identity = 106/199 (53.27%), Postives = 135/199 (67.84%), Query Frame = 1
Query:   76 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVXSVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLXQVCVLSCGISTGFGATVNVAKPKKGXTVANF 672
            TAG+VI+CKAAV WE  KP  IEEVEVAPP+ +EVR+K++   +C +D +       TPL P I GHEA GIV SVGEGVT ++PGD V+P+FT +C +C  C + ESN C    +   RG +  DG  RF+  GKPI+HFVG STFS+YTV     VAKI+ A+PL +VC++ CG STG+G+ V VAK   G T A F
Sbjct:    3 TAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVSGNLVTPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPRGTL-QDGTRRFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVF 199          
BLAST of EY728824 vs. ExPASy Swiss-Prot
Match: ADH1_STRCA (Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH1 PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.541e-53
Identity = 107/199 (53.77%), Postives = 135/199 (67.84%), Query Frame = 1
Query:   76 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVXSVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLXQVCVLSCGISTGFGATVNVAKPKKGXTVANF 672
            TAG+VI+CKAAV WE  KP  IEEVEVAPP+ +EVR+KI+ T +C +D +        P FP I GHEA G+V SVGEGVT ++PGD V+P+F  +C EC  C S + N+C    I     +M  DG SRF+ KGK I+HF GTSTF+EYTV H   VAKI+ AAPL +VC++ CG STG+GA +  AK + G T A F
Sbjct:    2 TAGKVIKCKAAVLWEPKKPFSIEEVEVAPPKAHEVRVKIIATGICRSDDHVISGVLVMP-FPIILGHEAAGVVESVGEGVTSVKPGDKVIPLFVPQCGECSVCLSTKGNLCRKNDIGPASALM-PDGTSRFTCKGKAIHHFAGTSTFTEYTVLHETAVAKIDAAAPLEKVCLIGCGFSTGYGAALQTAKVEPGSTCAVF 198          
BLAST of EY728824 vs. ExPASy Swiss-Prot
Match: ADH1_COTJA (Alcohol dehydrogenase 1 OS=Coturnix coturnix japonica GN=ADH1 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.931e-53
Identity = 103/199 (51.76%), Postives = 137/199 (68.84%), Query Frame = 1
Query:   76 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVXSVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLXQVCVLSCGISTGFGATVNVAKPKKGXTVANF 672
            TAG+VI+CKAAV WEA KP  +EEVEVAPP+ +EVR+KI+ T +C +D +        P FP I GHEA G+V SVGE VT L+PGD V+P+F  +C EC  C S + N+C    +++    ++ DG +RF+ KGK I+HF+GTSTF+EYTV H    AKI+ AAPL +VC++ CG STG+GA +  AK + G T A F
Sbjct:    2 TAGKVIKCKAAVLWEANKPFSLEEVEVAPPKAHEVRIKIVATGICRSDDHVVTGALAMP-FPVILGHEAAGVVESVGEKVTLLKPGDAVIPLFVPQCGECRSCLSTKGNLCIKNDLSSSPTGLMADGTTRFTCKGKAIHHFIGTSTFTEYTVVHETAAAKIDSAAPLEKVCLIGCGFSTGYGAVLQTAKVEPGSTCAVF 199          
BLAST of EY728824 vs. ExPASy Swiss-Prot
Match: ADH1_CHICK (Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 5.931e-53
Identity = 102/199 (51.26%), Postives = 136/199 (68.34%), Query Frame = 1
Query:   76 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVXSVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLXQVCVLSCGISTGFGATVNVAKPKKGXTVANF 672
            T G+VI+CKAAV WEA KP  +EEVEVAPP+ +EVR+KI+ T +C +D +        P FP I GHEA G++ SVGE VT L+PGD V+P+F  +C EC  C S + N+C    +++    ++ DG +RF+ KGK I+HFVGTSTF+EYTV H    AKI+ AAPL +VC++ CG STG+GA +  AK + G T A F
Sbjct:    3 TVGKVIKCKAAVLWEANKPFSLEEVEVAPPKAHEVRIKIVATGICRSDDHVVTGALAMP-FPIILGHEAAGVIESVGEKVTSLKPGDAVIPLFVPQCGECRSCLSTKGNLCIKNDLSSSPTGLMADGTTRFTCKGKAIHHFVGTSTFTEYTVVHETAAAKIDSAAPLEKVCLIGCGFSTGYGAVLQTAKVEAGSTCAVF 200          
The following BLAST results are available for this feature:
BLAST of EY728824 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
ADH1B_PANTR2.408e-5453.77Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH... [more]
ADH1_GADCA4.107e-5452.76Alcohol dehydrogenase 1 OS=Gadus callarias PE=1 SV... [more]
ADH1B_HUMAN4.107e-5453.77Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B ... [more]
ADH1_ALLMI9.150e-5452.76Alcohol dehydrogenase 1 OS=Alligator mississippien... [more]
ADH1B_PAPHA9.150e-5453.27Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH... [more]
ADH1E_HORSE1.195e-5353.77Alcohol dehydrogenase E chain OS=Equus caballus PE... [more]
ADH1G_HUMAN3.477e-5353.27Alcohol dehydrogenase 1C OS=Homo sapiens GN=ADH1C ... [more]
ADH1_STRCA4.541e-5353.77Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH... [more]
ADH1_COTJA5.931e-5351.76Alcohol dehydrogenase 1 OS=Coturnix coturnix japon... [more]
ADH1_CHICK5.931e-5351.26Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-B02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728824 ID=EY728824; Name=EY728824; organism=Citrus sinensis; type=EST; length=888bp
CACGCGTCCGCGGACGCGTGGGTGCTAATTTTACAGGTGTTGAGAGTATC
ATCATTCATCATCAATATGTCTGGCACAGCTGGTCAAGTTATTCGCTGCA
AAGCGGCGGTGGCATGGGAGGCGGGGAAGCCACTAGTGATTGAAGAAGTG
GAGGTGGCTCCACCACAGAAAAATGAAGTTCGATTGAAGATCCTCTTCAC
CTCTTTATGCCATACTGATGTTTACTTCTGGGAAGCCAAGGGACAAACAC
CTCTCTTTCCTCGCATTTTTGGTCATGAAGCTGGAGGGATTGTANAAAGT
GTAGGGGAGGGGGTAACTGATCTCCAACCAGGAGACCATGTTCTTCCTGT
ATTCACAGGAGAGTGCAAGGAATGTCCTCACTGTCATTCAGAGGAAAGCA
ATATGTGTGACCTCCTCCGGATCAATACTGACAGGGGTGTTATGATTAAT
GATGGTCAGTCAAGGTTCTCGATTAAGGGGAAGCCAATTTACCATTTTGT
GGGCACTTCTACCTTCAGTGAATACACTGTTACCCACGTCGGTTGTGTTG
CTAAGATCAATCCTGCTGCCCCTCTTNGACAAGTTTGTGTACTCAGCTGC
GGAATCTCCACAGGTTTTGGGGCTACTGTTAATGTTGCCAAACCGAAAAA
GGGCCANACTGTTGCCAATTTTGGATTGGGTGCAGTTGGCCTTGCTGCTG
CCCAAGGGCCAGATTTCCAGGGCTTCCAGATCCTTGGGGTGATTTGAACC
AGACGGATCATTGAACCAAAGTTTGGGGTTCCGAGTTTGTGAACCAGGCA
TATAACAACCTGTCCACGGTGATGTCTGAAGACAAGGGGGGATGGATCAA
ATTGAGATTTCGGAACCGTCCGGCCCGGATCGCCATTG
back to top