EY728824

Overview
NameEY728824
Unique NameEY728824
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728824 vs. ExPASy Swiss-Prot
Match: FADH_YEAST (S-(hydroxymethyl)glutathione dehydrogenase OS=Saccharomyces cerevisiae GN=SFA1 PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.699e-50
Identity = 98/202 (48.51%), Postives = 134/202 (66.34%), Query Frame = 1
Query:   70 SGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVXSVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRF-SIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLXQVCVLSCGISTGFGATVNVAKPKKGXTVANF 672
            + T G+ I+C AAVA++A KPL +EE+ V  P+ +EVR+KI +T++CHTD Y         LFP + GHE  GIV SVG+ V  ++PGDHV+ ++T EC +C  C S ++N+C  +R    +GVM  DG +RF + KG+ IYHF+G STFSEYTV     V  I+P APL   C+L CG++TGFGA +  A  +KG TVA F
Sbjct:    3 AATVGKPIKCIAAVAYDAKKPLSVEEITVDAPKAHEVRIKIEYTAVCHTDAYTLSGSDPEGLFPCVLGHEGAGIVESVGDDVITVKPGDHVIALYTAECGKCKFCTSGKTNLCGAVRATQGKGVM-PDGTTRFHNAKGEDIYHFMGCSTFSEYTVVADVSVVAIDPKAPLDAACLLGCGVTTGFGAALKTANVQKGDTVAVF 203          
BLAST of EY728824 vs. ExPASy Swiss-Prot
Match: FADH1_SCHPO (Probable S-(hydroxymethyl)glutathione dehydrogenase 1 OS=Schizosaccharomyces pombe GN=SPBC1539.07c PE=2 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 4.699e-50
Identity = 93/195 (47.69%), Postives = 134/195 (68.72%), Query Frame = 1
Query:   82 GQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVXSVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLXQVCVLSCGISTGFGATVNVAKPKKGXTVA 666
            G+ I CKAAVAW A +PL IE+++VAPP+ +EVR+K+ ++++CHTD Y          FP + GHE  GIV S+GEGV +++PGDHV+ ++T ECKEC  C S ++N+C  +R    RG+M  DG SRFS + K + H++G S+FS+YTV     +  I+ +APL  +C+L CG++TGFGA  + AK + G TVA
Sbjct:    5 GKTITCKAAVAWGAKEPLSIEDIQVAPPKAHEVRVKVDWSAVCHTDAYTLSGVDPEGAFPIVLGHEGAGIVESIGEGVINVRPGDHVILLYTPECKECKFCRSGKTNLCSKIRETQGRGLM-PDGTSRFSCRDKTLLHYMGCSSFSQYTVVADISLVAISHSAPLRSICLLGCGVTTGFGAVTHSAKVESGSTVA 198          
BLAST of EY728824 vs. ExPASy Swiss-Prot
Match: FRMA_ECOSM (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.786e-49
Identity = 93/194 (47.94%), Postives = 129/194 (66.49%), Query Frame = 1
Query:   91 IRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVXSVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLXQVCVLSCGISTGFGATVNVAKPKKGXTVANF 672
            ++ +AAVA+  GKPL I E++VAPP+K EV +K+  T +CHTD +         +FP + GHE  G+V  VGEGVT ++PGDHV+P++T EC EC  C S ++N+C  +R    +G+M  DG +RFS  G+P+YH++G STFSEYTV     +AKINP A    VC+L CG++TG GA  N AK +   +VA F
Sbjct:    1 MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPDDSVAVF 193          
BLAST of EY728824 vs. ExPASy Swiss-Prot
Match: FADH2_SCHPO (Putative S-(hydroxymethyl)glutathione dehydrogenase 2 OS=Schizosaccharomyces pombe GN=SPCC13B11.04c PE=2 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 1.786e-49
Identity = 101/204 (49.51%), Postives = 129/204 (63.24%), Query Frame = 1
Query:   61 INMSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVXSVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLXQVCVLSCGISTGFGATVNVAKPKKGXTVANF 672
            +  S TAG++I CKAAVAW+   PL IE V+V PP+ +EVR+KI+ + +CHTD Y    K    LFP I GHE  GIV SVG  VT +Q GD V+ ++T ECK C  C S ++N+C  +R    +G+M  DG SRFS  G  + HF+G STFSEYTV     V  I   APL  VC+L CGI+TG+GA    A  K+G +VA F
Sbjct:    1 MQQSPTAGKIINCKAAVAWQPAAPLSIENVQVFPPRVHEVRIKIVNSGVCHTDAYTLSGKDPEGLFPVILGHEGAGIVESVGPQVTTVQVGDPVIALYTPECKTCKFCKSGKTNLCGRIRTTQGKGLM-PDGTSRFSCNGNTLLHFMGCSTFSEYTVVADISVVAIERLAPLDSVCLLGCGITTGYGAATITADIKEGDSVAVF 203          
BLAST of EY728824 vs. ExPASy Swiss-Prot
Match: FRMA_ECOL6 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O6 GN=frmA PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.332e-49
Identity = 93/194 (47.94%), Postives = 129/194 (66.49%), Query Frame = 1
Query:   91 IRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVXSVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLXQVCVLSCGISTGFGATVNVAKPKKGXTVANF 672
            ++ +AAVA+  GKPL I E++VAPP+K EV +K+  T +CHTD +         +FP + GHE  G+V  VGEGVT ++PGDHV+P++T  C EC  C S ++N+C  +R    +G+M  DG +RFS  G+P+YH++G STFSEYTV     +AKINP A    VC+L CG++TG GA  N AK + G +VA F
Sbjct:    1 MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTEXCGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVF 193          
BLAST of EY728824 vs. ExPASy Swiss-Prot
Match: ADH7_RAT (Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus GN=Adh7 PE=1 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 5.196e-49
Identity = 101/199 (50.75%), Postives = 131/199 (65.83%), Query Frame = 1
Query:   76 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVXSVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLXQVCVLSCGISTGFGATVNVAKPKKGXTVANF 672
            TAG+VI+CKAAV W   +P  IE++EVAPP+  EVR+KIL T +C TD +  +       FP I GHEA GIV SVGE VT ++PGD V+P+F  +C+EC  C + E N+C    + T RGV+  DG +RF+ KGKP+ HF+ TSTF+EYTV     VAKI+  AP  + C++ CG STG+GA V  AK   G T A F
Sbjct:    3 TAGKVIKCKAAVLWGTNQPFSIEDIEVAPPKAKEVRVKILATGICGTDDHVIKGT-MVSKFPVIVGHEAVGIVESVGEEVTTVRPGDKVIPLFLPQCRECNPCRNPEGNLCIRSDL-TGRGVLA-DGTTRFTCKGKPVQHFMNTSTFTEYTVLDESSVAKIDAEAPPEKACLIGCGFSTGYGAAVKTAKVSPGSTCAVF 198          
BLAST of EY728824 vs. ExPASy Swiss-Prot
Match: ADHP_RABIT (Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctolagus cuniculus GN=ADH2-1 PE=2 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 6.786e-49
Identity = 99/203 (48.77%), Postives = 131/203 (64.53%), Query Frame = 1
Query:   73 GTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVXSVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGV---MINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLXQVCVLSCGISTGFGATVNVAKPKKGXTVANF 672
            GT G+VI+CKAA+AWEAGKPL IEEVEVAPP+ +EVR++I    LC +D +    K +    P I GHE  GIV SVG GVT+++PGD V+P++   CK+C  C S  +N C+      +  +   ++ D  SRF+ KGK IYHF G S FS+YTV     +AKI+  A L +VC++ CG STG+GA +N AK   G T A F
Sbjct:    2 GTKGKVIKCKAAIAWEAGKPLSIEEVEVAPPKAHEVRVQINAAGLCRSDTHVINPKFEGAFLPVILGHEGAGIVESVGPGVTNVKPGDKVIPLYIPHCKKCKFCLSPLTNFCEKFCKGKNPLIEQELMEDKTSRFTCKGKSIYHFFGISAFSQYTVVKDVNLAKIDDDANLERVCLIGCGFSTGYGAAINTAKVTPGSTCAVF 204          
BLAST of EY728824 vs. ExPASy Swiss-Prot
Match: ADH4_MOUSE (Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE=1 SV=3)

HSP 1 Score: 193.356 bits (490), Expect = 1.512e-48
Identity = 95/203 (46.80%), Postives = 134/203 (66.01%), Query Frame = 1
Query:   73 GTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVXSVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLR---INTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLXQVCVLSCGISTGFGATVNVAKPKKGXTVANF 672
            GT G+VI+CKAA+AW+ G PL IEE+EV+PP+  EVR++++ T +C TD+   + K +  LFP + GHE  GIV SVG GVT+ +PGD V+P F  +CK C  C S  +N+C  LR     T    ++ D  SRF+ KG+ IYHF+G S+FS+YTV     +A+++  A L +VC++ CG S+G+GA +N AK   G T A F
Sbjct:    2 GTQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKA-LFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVF 203          
BLAST of EY728824 vs. ExPASy Swiss-Prot
Match: ADHQ_RABIT (Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctolagus cuniculus GN=ADH2-2 PE=2 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.974e-48
Identity = 97/202 (48.02%), Postives = 132/202 (65.35%), Query Frame = 1
Query:   76 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVXSVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGV---MINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLXQVCVLSCGISTGFGATVNVAKPKKGXTVANF 672
            T G+VI+CKAA+AWEAGKPL IEEVEVAPP+ +EVR++I+  S+C +D Y      +  L P I GHE  GIV SVG GV + +PGD V+P++   C++C  C S  +N C     + +  +   +++D  SRF+ KGK IYHF+G S FS+YTV     +AKI+  A L +VC++ CG STG+GA +N AK   G T A F
Sbjct:    3 TKGKVIKCKAAIAWEAGKPLSIEEVEVAPPKAHEVRVQIIAASVCRSDTYVINPAFKEGLLPVILGHECAGIVESVGPGVNNFKPGDKVIPLYVPHCRKCKFCQSPLTNFCTKFSEHKNPIIEQELMDDKTSRFTCKGKSIYHFLGISAFSQYTVVKDINLAKIDDDANLKRVCLIGCGFSTGYGAAINDAKVTPGSTCAVF 204          
BLAST of EY728824 vs. ExPASy Swiss-Prot
Match: ADHL7_ARATH (Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.671e-47
Identity = 95/195 (48.72%), Postives = 128/195 (65.64%), Query Frame = 1
Query:   91 IRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVXSVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFS-IKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLXQVCVLSCGISTGFGATVNVAKPKKGXTVANF 672
            IRCKAAV+ +AG+PLV+EE+ VAPPQ  EVR++I+ T+LCH+DV FW+ +     FPRI GHEA G+V SVGE V ++  GD VLP F  +C +C  C S +SN+C          +   D  SRF+ + G+ ++HF+  S+FSEYTV  V  V KI+ + P  + C+LSCG+STG GA    AK +KG TV  F
Sbjct:   17 IRCKAAVSRKAGEPLVMEEIMVAPPQPFEVRIRIICTALCHSDVTFWKLQVPPACFPRILGHEAIGVVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLCSKFPFKVSPWMPRYDNSSRFTDLNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIPPSRACLLSCGVSTGVGAAWETAKVEKGSTVVIF 211          
The following BLAST results are available for this feature:
BLAST of EY728824 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
FADH_YEAST4.699e-5048.51S-(hydroxymethyl)glutathione dehydrogenase OS=Sacc... [more]
FADH1_SCHPO4.699e-5047.69Probable S-(hydroxymethyl)glutathione dehydrogenas... [more]
FRMA_ECOSM1.786e-4947.94S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FADH2_SCHPO1.786e-4949.51Putative S-(hydroxymethyl)glutathione dehydrogenas... [more]
FRMA_ECOL62.332e-4947.94S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
ADH7_RAT5.196e-4950.75Alcohol dehydrogenase class 4 mu/sigma chain OS=Ra... [more]
ADHP_RABIT6.786e-4948.77Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctol... [more]
ADH4_MOUSE1.512e-4846.80Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE... [more]
ADHQ_RABIT1.974e-4848.02Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctol... [more]
ADHL7_ARATH1.671e-4748.72Alcohol dehydrogenase-like 7 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-B02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728824 ID=EY728824; Name=EY728824; organism=Citrus sinensis; type=EST; length=888bp
CACGCGTCCGCGGACGCGTGGGTGCTAATTTTACAGGTGTTGAGAGTATC
ATCATTCATCATCAATATGTCTGGCACAGCTGGTCAAGTTATTCGCTGCA
AAGCGGCGGTGGCATGGGAGGCGGGGAAGCCACTAGTGATTGAAGAAGTG
GAGGTGGCTCCACCACAGAAAAATGAAGTTCGATTGAAGATCCTCTTCAC
CTCTTTATGCCATACTGATGTTTACTTCTGGGAAGCCAAGGGACAAACAC
CTCTCTTTCCTCGCATTTTTGGTCATGAAGCTGGAGGGATTGTANAAAGT
GTAGGGGAGGGGGTAACTGATCTCCAACCAGGAGACCATGTTCTTCCTGT
ATTCACAGGAGAGTGCAAGGAATGTCCTCACTGTCATTCAGAGGAAAGCA
ATATGTGTGACCTCCTCCGGATCAATACTGACAGGGGTGTTATGATTAAT
GATGGTCAGTCAAGGTTCTCGATTAAGGGGAAGCCAATTTACCATTTTGT
GGGCACTTCTACCTTCAGTGAATACACTGTTACCCACGTCGGTTGTGTTG
CTAAGATCAATCCTGCTGCCCCTCTTNGACAAGTTTGTGTACTCAGCTGC
GGAATCTCCACAGGTTTTGGGGCTACTGTTAATGTTGCCAAACCGAAAAA
GGGCCANACTGTTGCCAATTTTGGATTGGGTGCAGTTGGCCTTGCTGCTG
CCCAAGGGCCAGATTTCCAGGGCTTCCAGATCCTTGGGGTGATTTGAACC
AGACGGATCATTGAACCAAAGTTTGGGGTTCCGAGTTTGTGAACCAGGCA
TATAACAACCTGTCCACGGTGATGTCTGAAGACAAGGGGGGATGGATCAA
ATTGAGATTTCGGAACCGTCCGGCCCGGATCGCCATTG
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