EY728818

Overview
NameEY728818
Unique NameEY728818
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728818 vs. ExPASy Swiss-Prot
Match: ADH_CLOBE (NADP-dependent alcohol dehydrogenase OS=Clostridium beijerinckii GN=adh PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 7.734e-12
Identity = 62/215 (28.84%), Postives = 100/215 (46.51%), Query Frame = 1
Query:   40 KEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGG----RYNLCPEMKFF-ATPPVHGSLANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLXQTMFTALGATCAGG 663
            ++ M++GHE  G + +VGSEVK   PGDRV +      WR    + G       +    KF      V G   +  V+ AD+    LP ++ LE   M  + ++ G H    A+I   ++V+++G G +GL+ +  A+  GA RI+ V      +  AK  GA +I+        I ++V K+    G G+D      G  +T+  A+     GG
Sbjct:   52 RKNMILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKGVDRVIMAGGGSETLSQAVSMVKPGG 260          
BLAST of EY728818 vs. ExPASy Swiss-Prot
Match: ADH1_ENTHI (NADP-dependent alcohol dehydrogenase OS=Entamoeba histolytica GN=ADH1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.939e-11
Identity = 64/233 (27.47%), Postives = 101/233 (43.35%), Query Frame = 1
Query:   40 KEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGG------------RYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLXQTMFTALGATCAG---GKVCLVGDGSS 693
            +  M++GHE  G I KVGS VK L  GD+V +      W  +  + G            +++   +  F     V+ + AN  + P D+  K  D V L +      ++ G H    ANI     V ++G GP+GL+++  A   GA RI  V    +   +A E GA +I+       DI E++  ++   G G+D      G   T   A+     G   G V  +G+G +
Sbjct:   52 RHDMILGHEAVGQIVKVGSLVKRLKVGDKVIVPAITPDWGEEESQRGYPMHSGGMLGGWKFSNFKDGVFSEVFHVNEADANLALLPRDI--KPEDAVMLSD-----MVTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNG--DIVEQI--LKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDN 273          
BLAST of EY728818 vs. ExPASy Swiss-Prot
Match: MTDH_APIGR (Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.551e-11
Identity = 62/253 (24.51%), Postives = 110/253 (43.48%), Query Frame = 1
Query:   46 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPE------MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLXQTMFTALGATCAGGKVCLVGDGSS*NDCSTHSXC--CKVIGFGLNXGKRES 768
            P+V GHE  GV+ +VGS+V+ +  GD V +   + SC  C+ C   R + C          +F     HG  ++ +V       + P N+ L+ GA  +C  ++            P T + ++G G +G V +  A+AFGA ++ ++D+ + +   A E +GAD+ +  S   Q          K   + +D   D   +   +          GK+ +VG      +    S     K++G  +N G +E+
Sbjct:   67 PIVPGHEIVGVVTEVGSKVEKVKVGDNVGIGCLVGSCRSCESCCDNRESHCENTIDTYGSIYFDGTMTHGGYSDTMVADEHFILRWPKNLPLDSGAPLLCAGITTYSPLKYYGLDKPGTKIGVVGLGGLGHVAVKMAKAFGA-QVTVIDISESKRKEALEKLGADSFLLNSDQEQ---------MKGARSSLDGIIDTVPVNHPLAPLFDLLKPNGKLVMVGAPEKPFELPVFSLLKGRKLLGGTINGGIKET 309          
The following BLAST results are available for this feature:
BLAST of EY728818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
ADH_CLOBE7.734e-1228.84NADP-dependent alcohol dehydrogenase OS=Clostridiu... [more]
ADH1_ENTHI2.939e-1127.47NADP-dependent alcohol dehydrogenase OS=Entamoeba ... [more]
MTDH_APIGR8.551e-1124.51Mannitol dehydrogenase OS=Apium graveolens GN=MTD ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-A07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728818 ID=EY728818; Name=EY728818; organism=Citrus sinensis; type=EST; length=827bp
CACGCGTCCGAGACCTTGAGGCTTGCCGATTTTGTAGTGAAAGAGCCTAT
GGTGATCGGGCATGAGTGTGCTGGGGTCATAGAGAAGGTGGGAAGCGAGG
TGAAGACTTTGGTGCCCGGTGACCGTGTGGCCCTGGAACCAGGGATCAGC
TGCTGGCGATGTGATCACTGCAAAGGAGGTCGATACAATTTGTGTCCAGA
GATGAAATTTTTTGCAACTCCGCCAGTTCATGGTTCTCTGGCTAATCAGG
TGGTGCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCCTG
GAGGAAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTGTTCATGCTTGCCG
CCGTGCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGTGCAGGGC
CCATAGGACTTGTCACAATGCTAGCAGCTCGTGCTTTTGGAGCTCCTAGA
ATTGTCATTGTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGAAAT
TGGTGCAGATAATATTGTTAAAGTTTCAACAAATTTGCAGGATATAGCTG
AAGAAGTGGAAAAGATACAGAAAGCCATGGGGACAGGAATAGATGTGAGC
TTTGATTGTGCAGGCCTTNAACAAACCATGTTCACAGCACTGGGCGCCAC
TTGTGCAGGTGGTAAAGTTTGCCTCGTGGGGGATGGGTCATCATGAAATG
ACTGTTCCACTCACTCCANCTGCTGTAAGGTGATTGGATTTGGCTTAAAT
AANGGCAAAAGGGAATCTTGAACANGGTGGCTGCCANGCGTGATGGACTG
ATGGTGATGCTATGACAAGTATCCTAT
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