EY728818

Overview
NameEY728818
Unique NameEY728818
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY728818 vs. ExPASy Swiss-Prot
Match: TDH_ECOSM (L-threonine 3-dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=tdh PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.188e-28
Identity = 77/214 (35.98%), Postives = 116/214 (54.21%), Query Frame = 1 
Query:   46 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLXQTMFTALGATCAGGKVCLVG 681
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    VH     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL D+  E+      M  G DV  + +G      T L     GG++ ++G
Sbjct:   58 PMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMTEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLG 263
[Close]
BLAST of EY728818 vs. ExPASy Swiss-Prot
Match: TDH_ECOSE (L-threonine 3-dehydrogenase OS=Escherichia coli (strain SE11) GN=tdh PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.188e-28
Identity = 77/214 (35.98%), Postives = 116/214 (54.21%), Query Frame = 1 
Query:   46 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLXQTMFTALGATCAGGKVCLVG 681
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    VH     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL D+  E+      M  G DV  + +G      T L     GG++ ++G
Sbjct:   58 PMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLG 263
[Close]
BLAST of EY728818 vs. ExPASy Swiss-Prot
Match: TDH_ECOLC (L-threonine 3-dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=tdh PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.188e-28
Identity = 77/214 (35.98%), Postives = 116/214 (54.21%), Query Frame = 1 
Query:   46 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLXQTMFTALGATCAGGKVCLVG 681
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    VH     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL D+  E+      M  G DV  + +G      T L     GG++ ++G
Sbjct:   58 PMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLG 263
[Close]
BLAST of EY728818 vs. ExPASy Swiss-Prot
Match: TDH_ECOL6 (L-threonine 3-dehydrogenase OS=Escherichia coli O6 GN=tdh PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.188e-28
Identity = 77/214 (35.98%), Postives = 116/214 (54.21%), Query Frame = 1 
Query:   46 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLXQTMFTALGATCAGGKVCLVG 681
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    VH     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL D+  E+      M  G DV  + +G      T L     GG++ ++G
Sbjct:   58 PMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMTEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLG 263
[Close]
BLAST of EY728818 vs. ExPASy Swiss-Prot
Match: TDH_ECOL5 (L-threonine 3-dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=tdh PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.188e-28
Identity = 77/214 (35.98%), Postives = 116/214 (54.21%), Query Frame = 1 
Query:   46 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLXQTMFTALGATCAGGKVCLVG 681
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    VH     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL D+  E+      M  G DV  + +G      T L     GG++ ++G
Sbjct:   58 PMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLG 263
[Close]
BLAST of EY728818 vs. ExPASy Swiss-Prot
Match: TDH_ECOK1 (L-threonine 3-dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=tdh PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.188e-28
Identity = 77/214 (35.98%), Postives = 116/214 (54.21%), Query Frame = 1 
Query:   46 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLXQTMFTALGATCAGGKVCLVG 681
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    VH     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL D+  E+      M  G DV  + +G      T L     GG++ ++G
Sbjct:   58 PMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMTEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLG 263
[Close]
BLAST of EY728818 vs. ExPASy Swiss-Prot
Match: TDH_ECOHS (L-threonine 3-dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=tdh PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.188e-28
Identity = 77/214 (35.98%), Postives = 116/214 (54.21%), Query Frame = 1 
Query:   46 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLXQTMFTALGATCAGGKVCLVG 681
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    VH     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL D+  E+      M  G DV  + +G      T L     GG++ ++G
Sbjct:   58 PMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLG 263
[Close]
BLAST of EY728818 vs. ExPASy Swiss-Prot
Match: TDH_ECO8A (L-threonine 3-dehydrogenase OS=Escherichia coli O8 (strain IAI1) GN=tdh PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.188e-28
Identity = 77/214 (35.98%), Postives = 116/214 (54.21%), Query Frame = 1 
Query:   46 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLXQTMFTALGATCAGGKVCLVG 681
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    VH     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL D+  E+      M  G DV  + +G      T L     GG++ ++G
Sbjct:   58 PMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLG 263
[Close]
BLAST of EY728818 vs. ExPASy Swiss-Prot
Match: TDH_ECO81 (L-threonine 3-dehydrogenase OS=Escherichia coli O81 (strain ED1a) GN=tdh PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.188e-28
Identity = 77/214 (35.98%), Postives = 116/214 (54.21%), Query Frame = 1 
Query:   46 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLXQTMFTALGATCAGGKVCLVG 681
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    VH     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL D+  E+      M  G DV  + +G      T L     GG++ ++G
Sbjct:   58 PMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMTEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLG 263
[Close]
BLAST of EY728818 vs. ExPASy Swiss-Prot
Match: TDH_ECO7I (L-threonine 3-dehydrogenase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=tdh PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.188e-28
Identity = 77/214 (35.98%), Postives = 116/214 (54.21%), Query Frame = 1 
Query:   46 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLXQTMFTALGATCAGGKVCLVG 681
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    VH     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL D+  E+      M  G DV  + +G      T L     GG++ ++G
Sbjct:   58 PMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMTEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLG 263
The following BLAST results are available for this feature:
BLAST of EY728818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
TDH_ECOSM1.188e-2835.98L-threonine 3-dehydrogenase OS=Escherichia coli (s... [more]
TDH_ECOSE1.188e-2835.98L-threonine 3-dehydrogenase OS=Escherichia coli (s... [more]
TDH_ECOLC1.188e-2835.98L-threonine 3-dehydrogenase OS=Escherichia coli (s... [more]
TDH_ECOL61.188e-2835.98L-threonine 3-dehydrogenase OS=Escherichia coli O6... [more]
TDH_ECOL51.188e-2835.98L-threonine 3-dehydrogenase OS=Escherichia coli O6... [more]
TDH_ECOK11.188e-2835.98L-threonine 3-dehydrogenase OS=Escherichia coli O1... [more]
TDH_ECOHS1.188e-2835.98L-threonine 3-dehydrogenase OS=Escherichia coli O9... [more]
TDH_ECO8A1.188e-2835.98L-threonine 3-dehydrogenase OS=Escherichia coli O8... [more]
TDH_ECO811.188e-2835.98L-threonine 3-dehydrogenase OS=Escherichia coli O8... [more]
TDH_ECO7I1.188e-2835.98L-threonine 3-dehydrogenase OS=Escherichia coli O7... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-A07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728818 ID=EY728818; Name=EY728818; organism=Citrus sinensis; type=EST; length=827bp
CACGCGTCCGAGACCTTGAGGCTTGCCGATTTTGTAGTGAAAGAGCCTAT
GGTGATCGGGCATGAGTGTGCTGGGGTCATAGAGAAGGTGGGAAGCGAGG
TGAAGACTTTGGTGCCCGGTGACCGTGTGGCCCTGGAACCAGGGATCAGC
TGCTGGCGATGTGATCACTGCAAAGGAGGTCGATACAATTTGTGTCCAGA
GATGAAATTTTTTGCAACTCCGCCAGTTCATGGTTCTCTGGCTAATCAGG
TGGTGCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCCTG
GAGGAAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTGTTCATGCTTGCCG
CCGTGCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGTGCAGGGC
CCATAGGACTTGTCACAATGCTAGCAGCTCGTGCTTTTGGAGCTCCTAGA
ATTGTCATTGTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGAAAT
TGGTGCAGATAATATTGTTAAAGTTTCAACAAATTTGCAGGATATAGCTG
AAGAAGTGGAAAAGATACAGAAAGCCATGGGGACAGGAATAGATGTGAGC
TTTGATTGTGCAGGCCTTNAACAAACCATGTTCACAGCACTGGGCGCCAC
TTGTGCAGGTGGTAAAGTTTGCCTCGTGGGGGATGGGTCATCATGAAATG
ACTGTTCCACTCACTCCANCTGCTGTAAGGTGATTGGATTTGGCTTAAAT
AANGGCAAAAGGGAATCTTGAACANGGTGGCTGCCANGCGTGATGGACTG
ATGGTGATGCTATGACAAGTATCCTAT
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