EY728818

Overview
NameEY728818
Unique NameEY728818
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728818 vs. ExPASy Swiss-Prot
Match: TDH_ECO5E (L-threonine 3-dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=tdh PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.188e-28
Identity = 77/214 (35.98%), Postives = 116/214 (54.21%), Query Frame = 1
Query:   46 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLXQTMFTALGATCAGGKVCLVG 681
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    VH     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL D+  E+      M  G DV  + +G      T L     GG++ ++G
Sbjct:   58 PMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLG 263          
BLAST of EY728818 vs. ExPASy Swiss-Prot
Match: TDH_ECO57 (L-threonine 3-dehydrogenase OS=Escherichia coli O157:H7 GN=tdh PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.188e-28
Identity = 77/214 (35.98%), Postives = 116/214 (54.21%), Query Frame = 1
Query:   46 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLXQTMFTALGATCAGGKVCLVG 681
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    VH     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL D+  E+      M  G DV  + +G      T L     GG++ ++G
Sbjct:   58 PMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLG 263          
BLAST of EY728818 vs. ExPASy Swiss-Prot
Match: TDH_ECO55 (L-threonine 3-dehydrogenase OS=Escherichia coli (strain 55989 / EAEC) GN=tdh PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.188e-28
Identity = 77/214 (35.98%), Postives = 116/214 (54.21%), Query Frame = 1
Query:   46 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLXQTMFTALGATCAGGKVCLVG 681
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    VH     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL D+  E+      M  G DV  + +G      T L     GG++ ++G
Sbjct:   58 PMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLG 263          
BLAST of EY728818 vs. ExPASy Swiss-Prot
Match: TDH_ECO45 (L-threonine 3-dehydrogenase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=tdh PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.188e-28
Identity = 77/214 (35.98%), Postives = 116/214 (54.21%), Query Frame = 1
Query:   46 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLXQTMFTALGATCAGGKVCLVG 681
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    VH     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL D+  E+      M  G DV  + +G      T L     GG++ ++G
Sbjct:   58 PMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMTEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLG 263          
BLAST of EY728818 vs. ExPASy Swiss-Prot
Match: TDH_ECO27 (L-threonine 3-dehydrogenase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=tdh PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.188e-28
Identity = 77/214 (35.98%), Postives = 116/214 (54.21%), Query Frame = 1
Query:   46 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLXQTMFTALGATCAGGKVCLVG 681
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ +P    VH     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  NL D+  E+      M  G DV  + +G      T L     GG++ ++G
Sbjct:   58 PMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMTEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLG 263          
BLAST of EY728818 vs. ExPASy Swiss-Prot
Match: TDH_SHEWM (L-threonine 3-dehydrogenase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=tdh PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.026e-28
Identity = 75/213 (35.21%), Postives = 116/213 (54.46%), Query Frame = 1
Query:   46 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLXQTMFTALGATCAGGKVCLVG 681
            PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+ GR +LC            G+ A  +V PA   FK+PD++S +  ++ +P    VH     ++  E +VLI GAGPIG++     R  GA  +VI DV++YRL +A+++GA   V V+  +L+D+  E+      M  G DV  + +G+     + L     GGKV ++G
Sbjct:   58 PMVVGHEYVGEVVDIGQEVRGFSIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVGVNR-DGAFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELAQKMGATRAVNVAKEDLKDVMSEL-----GMTEGFDVGLEMSGVPSAFHSMLDTMNHGGKVAMLG 263          
BLAST of EY728818 vs. ExPASy Swiss-Prot
Match: TDH_ANADE (L-threonine 3-dehydrogenase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=tdh PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.026e-28
Identity = 75/216 (34.72%), Postives = 118/216 (54.63%), Query Frame = 1
Query:   37 VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLXQTMFTALGATCAGGKVCLVG 681
            V  PMV+GHE  G +E+VG+EV+   PG+RV+ E  ++C  C +C+ GR +LC            GS A  VV PAD  +++PD++  +  A+ +P     H     ++  E +VL+ GAGPIG++    AR  GA  +V+ DV+DYRL +A+ +GA   V V+  +L+ +  E+      M  G DV  + +G  +     L     GG++ L+G
Sbjct:   56 VPVPMVVGHEYVGRVERVGAEVEAFRPGERVSGEGHVTCGFCRNCRAGRRHLCRHTVGVGVNR-PGSFAEYVVIPADNVYRIPDDIPDDIAAIFDPFGNATHTALSFDLVGE-DVLVTGAGPIGVMAAAIARHVGARHVVVTDVNDYRLDLARRMGASRAVNVAREDLRAVMSEL-----GMREGFDVGLEMSGNGRAFRQLLEVMNHGGRIALLG 264          
BLAST of EY728818 vs. ExPASy Swiss-Prot
Match: TDH_SHESH (L-threonine 3-dehydrogenase OS=Shewanella sediminis (strain HAW-EB3) GN=tdh PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.455e-28
Identity = 75/213 (35.21%), Postives = 116/213 (54.46%), Query Frame = 1
Query:   46 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLXQTMFTALGATCAGGKVCLVG 681
            PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+GGR +LC            G+ A  +V PA   FK+PD++S +  ++ +P    VH     ++  E +VLI GAGPIG++     R  GA  +VI DV++YRL +A ++GA   V V+  +L+ + EE+      M  G DV  + +G+     + L     GGK+ ++G
Sbjct:   58 PMVVGHEYVGEVIDMGIEVRGFDVGDRVSGEGHITCGHCRNCRGGRTHLCRNTSGVGVNR-DGAFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELANKMGATRAVNVAKESLEGVMEEL-----GMTEGFDVGLEMSGVPSAFHSMLDTMNHGGKIAMLG 263          
BLAST of EY728818 vs. ExPASy Swiss-Prot
Match: TDH_SALTY (L-threonine 3-dehydrogenase OS=Salmonella typhimurium GN=tdh PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.455e-28
Identity = 75/213 (35.21%), Postives = 114/213 (53.52%), Query Frame = 1
Query:   46 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLXQTMFTALGATCAGGKVCLVG 681
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC            G  A  +V PA   FK+PDN+S +  ++ +P    VH     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  +L D+  E+      M  G DV  + +G      T L     GG++ ++G
Sbjct:   58 PMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTTGVGVNR-PGCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGVMAAAVAKHVGARHVVITDVNEYRLELARKMGVTRAVNVAKESLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLG 263          
BLAST of EY728818 vs. ExPASy Swiss-Prot
Match: TDH_SALTI (L-threonine 3-dehydrogenase OS=Salmonella typhi GN=tdh PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.455e-28
Identity = 75/213 (35.21%), Postives = 114/213 (53.52%), Query Frame = 1
Query:   46 PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLXQTMFTALGATCAGGKVCLVG 681
            PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC            G  A  +V PA   FK+PDN+S +  ++ +P    VH     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V V+  +L D+  E+      M  G DV  + +G      T L     GG++ ++G
Sbjct:   58 PMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTTGVGVNR-PGCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGVMAAAVAKHVGARHVVITDVNEYRLELARKMGVTRAVNVAKESLNDVMAEL-----GMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLG 263          
The following BLAST results are available for this feature:
BLAST of EY728818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
TDH_ECO5E1.188e-2835.98L-threonine 3-dehydrogenase OS=Escherichia coli O1... [more]
TDH_ECO571.188e-2835.98L-threonine 3-dehydrogenase OS=Escherichia coli O1... [more]
TDH_ECO551.188e-2835.98L-threonine 3-dehydrogenase OS=Escherichia coli (s... [more]
TDH_ECO451.188e-2835.98L-threonine 3-dehydrogenase OS=Escherichia coli O4... [more]
TDH_ECO271.188e-2835.98L-threonine 3-dehydrogenase OS=Escherichia coli O1... [more]
TDH_SHEWM2.026e-2835.21L-threonine 3-dehydrogenase OS=Shewanella woodyi (... [more]
TDH_ANADE2.026e-2834.72L-threonine 3-dehydrogenase OS=Anaeromyxobacter de... [more]
TDH_SHESH3.455e-2835.21L-threonine 3-dehydrogenase OS=Shewanella sedimini... [more]
TDH_SALTY3.455e-2835.21L-threonine 3-dehydrogenase OS=Salmonella typhimur... [more]
TDH_SALTI3.455e-2835.21L-threonine 3-dehydrogenase OS=Salmonella typhi GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-A07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728818 ID=EY728818; Name=EY728818; organism=Citrus sinensis; type=EST; length=827bp
CACGCGTCCGAGACCTTGAGGCTTGCCGATTTTGTAGTGAAAGAGCCTAT
GGTGATCGGGCATGAGTGTGCTGGGGTCATAGAGAAGGTGGGAAGCGAGG
TGAAGACTTTGGTGCCCGGTGACCGTGTGGCCCTGGAACCAGGGATCAGC
TGCTGGCGATGTGATCACTGCAAAGGAGGTCGATACAATTTGTGTCCAGA
GATGAAATTTTTTGCAACTCCGCCAGTTCATGGTTCTCTGGCTAATCAGG
TGGTGCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCCTG
GAGGAAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTGTTCATGCTTGCCG
CCGTGCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGTGCAGGGC
CCATAGGACTTGTCACAATGCTAGCAGCTCGTGCTTTTGGAGCTCCTAGA
ATTGTCATTGTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGAAAT
TGGTGCAGATAATATTGTTAAAGTTTCAACAAATTTGCAGGATATAGCTG
AAGAAGTGGAAAAGATACAGAAAGCCATGGGGACAGGAATAGATGTGAGC
TTTGATTGTGCAGGCCTTNAACAAACCATGTTCACAGCACTGGGCGCCAC
TTGTGCAGGTGGTAAAGTTTGCCTCGTGGGGGATGGGTCATCATGAAATG
ACTGTTCCACTCACTCCANCTGCTGTAAGGTGATTGGATTTGGCTTAAAT
AANGGCAAAAGGGAATCTTGAACANGGTGGCTGCCANGCGTGATGGACTG
ATGGTGATGCTATGACAAGTATCCTAT
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