EY728785

Overview
NameEY728785
Unique NameEY728785
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728785 vs. ExPASy Swiss-Prot
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.634e-28
Identity = 71/151 (47.02%), Postives = 101/151 (66.89%), Query Frame = 3
Query:   24 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALELSS-QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRVRLLQQ 473
            MGRG++ ++RI++  +RQVTF+KRR GL+KKA EL++LCDAEV LIIFS+ GKLY+F +SSSM   ++RY K      E       A E+   Q+E   L+    ALQ + R ++GE+L  L+  EL SLE Q+++SL+ IR  + +LL Q
Sbjct:    1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDF-ASSSMKSVIDRYNKSKI---EQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEISLRGIRMRKEQLLTQ 147          
BLAST of EY728785 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.804e-27
Identity = 68/152 (44.74%), Postives = 102/152 (67.11%), Query Frame = 3
Query:   24 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALELSS--QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRVRLLQQ 473
            MGRG++ +KRI+N +NRQVTF+KRR GL+KKA EL++LCDA+V LI+FS  G+LY+F SSSSM   +ERYQ+    A E +      +  +   Q+E   L+ + + L  + R LLGEE+     ++L+ L+ Q++MSL  IR+ + +LL +
Sbjct:    1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDF-SSSSMKSIIERYQE----AGEEHCRLLNPMSEAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAE 147          
BLAST of EY728785 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.804e-27
Identity = 71/151 (47.02%), Postives = 100/151 (66.23%), Query Frame = 3
Query:   24 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS-SSMVKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRVRLLQQ 473
            MGRG++E+KRIENK +RQVTF+KRR GLLKK +ELSVLCDA++ LIIFS++GKL+E+CS   SM + + RY +   GA  P    R  L      E  K++     LQ S +   G++L     +EL  LE+QL+ +L +IR+ ++ L+QQ
Sbjct:    4 MGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQTT-GASLPVEDNRVQL----YDEVAKMRRDTLNLQLSLQRYKGDDLSLAQYEELNELEKQLEHALNKIRARKLELMQQ 149          
BLAST of EY728785 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.356e-27
Identity = 73/148 (49.32%), Postives = 98/148 (66.22%), Query Frame = 3
Query:   24 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRVRLL 467
            MGRG++E+KRIEN  +RQVTF+KRR+GLLKKA ELSVLCDAEVA+I+FS  GKL+E+ SS+ M +TL RY   N+ +   + +  +  E+        LK +   LQ     L G+ L PL  KEL+SLE+QL  +L  +R  + RLL
Sbjct:    1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEY-SSTGMKQTLSRYG--NHQSSSASKAEEDCAEVDI------LKDQLSKLQEKHLQLQGKGLNPLTFKELQSLEQQLYHALITVRERKERLL 139          
BLAST of EY728785 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.248e-27
Identity = 66/151 (43.71%), Postives = 101/151 (66.89%), Query Frame = 3
Query:   24 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYQ-KCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRVRLLQQ 473
            M RG+V+++RIEN ++RQVTF KRR GLLKKA ELSVLCDA+V +IIFS++GKL+E  ++ +M   +ERYQ     G  EP    R+ +   ++Q    L+   + LQR  R+  G   G +   +L +LE+ L++ + QIR+T+++++QQ
Sbjct:    1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATNGNMHNLVERYQSNVAGGQMEPGALQRQQV---AEQGIFLLREEIDLLQRGLRSTYGGGAGEMTLDKLHALEKGLELWIYQIRTTKMQMMQQ 148          
BLAST of EY728785 vs. ExPASy Swiss-Prot
Match: AGL12_ARATH (Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana GN=AGL12 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 6.854e-27
Identity = 67/156 (42.95%), Postives = 98/156 (62.82%), Query Frame = 3
Query:   24 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYQKC---NYGAPEPNVSAREALE---LSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRVRLLQQ 473
            M RG+++LKRIEN ++RQVTF KRR GLLKKA ELSVLCDAE+ ++IFS +GKL+E  +  +M   +++Y KC     G+     +A+E L+   L  + E   LK   E LQ+    + G   G +N +EL  LE+ L+  + QIRS ++ ++ Q
Sbjct:    1 MARGKIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATKGTMEGMIDKYMKCTGGGRGSSSATFTAQEQLQPPNLDPKDEINVLKQEIEMLQKGISYMFGGGDGAMNLEELLLLEKHLEYWISQIRSAKMDVMLQ 156          
BLAST of EY728785 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.169e-26
Identity = 70/149 (46.98%), Postives = 100/149 (67.11%), Query Frame = 3
Query:   24 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALELSS-QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRVRLL 467
            MGRG++ +++I++  +RQVTF+KRR GL+KKA EL++LCDAEV LIIFSN  KLY+F +SSS+  T+ER+   N    E       A E+   Q+E   L+    +LQ + R L G EL  L+ KEL+++E QL+MSL+ IR  R ++L
Sbjct:    1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDF-ASSSVKSTIERF---NTAKMEEQELMNPASEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSVKELQNIESQLEMSLRGIRMKREQIL 145          
BLAST of EY728785 vs. ExPASy Swiss-Prot
Match: M17_MAIZE (MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.994e-26
Identity = 66/152 (43.42%), Postives = 100/152 (65.79%), Query Frame = 3
Query:   24 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-SSSMVKTLERYQKC-NYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRVRLLQQ 473
            MGRG++E+KRIEN  NRQVTF+KRR GLLKKA EL+VLCDA V ++IFS+ GK++E+CS + S+ + +E+YQ   N    E N   +  LE++      ++K   E L+   R   G++L  L   ++  LE+QL+ S+ ++R+ + +LL Q
Sbjct:    1 MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPACSLRELIEQYQHATNSHFEEINHDQQILLEMT------RMKNEMEKLETGIRRYTGDDLSSLTLDDVSDLEQQLEYSVSKVRARKHQLLNQ 146          
BLAST of EY728785 vs. ExPASy Swiss-Prot
Match: DEF21_ANTMA (MADS-box protein defh21 OS=Antirrhinum majus GN=DEFH21 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.605e-26
Identity = 65/152 (42.76%), Postives = 99/152 (65.13%), Query Frame = 3
Query:   24 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS-SMVKTLERYQKCNYGAPE-PNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRVRLLQQ 473
            MGRG++E+KRIEN  +RQVTF+KRR+GL+KK +ELSVLCDA++ LI+FS +GKL E+C+   SM + ++RY K     PE  N +   A      +E  ++K     LQ + +   G++L  +  +EL  LE+ LD SL ++R+ ++ LL +
Sbjct:    1 MGRGKIEVKRIENNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTPPFSMKQIIDRYVKAKGILPEMENRAGPHADNDQVIKELTRMKEETLNLQLNLQRYKGDDLSTVRFEELTELEKLLDQSLNKVRARKLELLHE 152          
BLAST of EY728785 vs. ExPASy Swiss-Prot
Match: GLOB_TOBAC (Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.898e-26
Identity = 68/151 (45.03%), Postives = 98/151 (64.90%), Query Frame = 3
Query:   24 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRVRLLQQL 476
            MGRG++E+KRIEN  NRQVT++KRRNG+LKKA E+SVLCDA V++IIF++ GK++EF SS+S+V  L++Y K             +A   +   E  K+K   + +Q   R+L GE++  LN +EL  LE  LD  L  IR+ +  LL+ +
Sbjct:    1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEF-SSTSLVDILDQYHKLT------GRRLWDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMMLEDALDNGLTSIRNKQNDLLRMM 144          
The following BLAST results are available for this feature:
BLAST of EY728785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
AGL21_ARATH3.634e-2847.02Agamous-like MADS-box protein AGL21 OS=Arabidopsis... [more]
MAD25_ORYSJ1.804e-2744.74MADS-box transcription factor 25 OS=Oryza sativa s... [more]
FBP24_PETHY1.804e-2747.02MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24... [more]
AGL15_ARATH2.356e-2749.32Agamous-like MADS-box protein AGL15 OS=Arabidopsis... [more]
MAD33_ORYSJ5.248e-2743.71MADS-box transcription factor 33 OS=Oryza sativa s... [more]
AGL12_ARATH6.854e-2742.95Agamous-like MADS-box protein AGL12 OS=Arabidopsis... [more]
AGL17_ARATH1.169e-2646.98Agamous-like MADS-box protein AGL17 OS=Arabidopsis... [more]
M17_MAIZE1.994e-2643.42MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=... [more]
DEF21_ANTMA2.605e-2642.76MADS-box protein defh21 OS=Antirrhinum majus GN=DE... [more]
GLOB_TOBAC9.898e-2645.03Floral homeotic protein GLOBOSA OS=Nicotiana tabac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-E09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728785 ID=EY728785; Name=EY728785; organism=Citrus sinensis; type=EST; length=858bp
CCACGCGTCCGAAGGAGAAGAAAATGGGAAGGGGTAGGGTTGAGTTGAAG
AGGATAGAGAACAAGATCAACAGGCAAGTGACCTTTGCAAAGAGAAGAAA
TGGCCTTTTGAAGAAAGCTTATGAGCTTTCCGTTCTTTGTGATGCTGAGG
TTGCTCTCATCATTTTCTCCAATAGAGGAAAGCTGTACGAGTTTTGCAGT
AGTTCAAGCATGGTCAAAACGCTTGAGAGGTACCAGAAGTGCAACTATGG
AGCACCAGAACCGAATGTGTCCGCAAGGGAGGCCCTGGAGCTAAGTAGCC
AGCAAGAATATCTGAAGCTTAAAGCACGATATGAAGCCCTACAGAGATCC
CAAAGGAATCTCCTTGGAGAAGAACTTGGCCCTCTAAACAGCAAAGAGCT
TGAGTCACTTGAAAGGCAGCTTGATATGTCATTGAAGCAGATCAGATCAA
CAAGAGTACGTTTGCTTCAACAGTTACCACATTATCCTTATTCATATTTA
AACTTTCACTACTTTGGATCATAATGAGAAGTTTGCTAGCTTCATCTGCA
TATATAGTGGATATGCTACTCTAGATGCATGTNTTCATTTTGAAAGTTTA
AAGTACATTACTCTTTTAACACACATGTTGTAAAGAATGTGTTAACTAAG
TGGTTATTCAATCACATCAGATTAGAACTTTGTNTAATATTTCTGCCTTG
CTTATATATTCTGAATTCAAGAAGAAAGGAGGGTGTGTTTGTGAACTANT
GGGAGACAAATCACATGTTATCAGTTATTTTAAAATCTATGACANAGTGA
TATACATTTGCTGTTGAATCACAATNATAGCTGGAGCCCGATCTGGAGTA
ATCCTAGT
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