EY728782

Overview
NameEY728782
Unique NameEY728782
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length803
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728782 vs. ExPASy Swiss-Prot
Match: H90B2_HUMAN (Putative heat shock protein HSP 90-beta 2 OS=Homo sapiens GN=HSP90AB2P PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.284e-13
Identity = 41/74 (55.41%), Postives = 55/74 (74.32%), Query Frame = 2
Query:   11 LISNSSDALDXIRFESLTEQKQLDAQXELFIHIIP**XPHSLSIIDSGIGMT*ADLVEXLGTXAK-SGEPEFME 229
            LISN+SDALD IR+ESLT+  +LD+  EL I IIP    H+L+++D+GIGMT ADL+  LGT AK   + E++E
Sbjct:   43 LISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNTQEHTLTLVDTGIGMTKADLINNLGTIAKFQDQTEYLE 116          
BLAST of EY728782 vs. ExPASy Swiss-Prot
Match: H90B3_HUMAN (Putative heat shock protein HSP 90-beta-3 OS=Homo sapiens GN=HSP90AB3P PE=5 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.983e-13
Identity = 42/77 (54.55%), Postives = 53/77 (68.83%), Query Frame = 2
Query:   11 LISNSSDALDXIRFESLTEQKQLDAQXELFIHIIP**XPHSLSIIDSGIGMT*ADLVEXLGTXAKSGEPEFMEGFAA 241
            LISN+SDALD IR+ESLT+  +LD+  EL I IIP     +L+++D+GIGMT ADL+  L T AKSG    ME   A
Sbjct:   43 LISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLALVDTGIGMTKADLINNLRTIAKSGTKACMEALQA 119          
BLAST of EY728782 vs. ExPASy Swiss-Prot
Match: HTPG_RHOPA (Chaperone protein htpG OS=Rhodopseudomonas palustris GN=htpG PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.088e-13
Identity = 43/103 (41.75%), Postives = 63/103 (61.17%), Query Frame = 2
Query:    5 RPLISNSSDALDXIRFESLTEQKQLDAQXELFIHIIP**XPHSLSIIDSGIGMT*ADLVEXLGTXAKSGEPEFMEGFAAGADFT*M-GPFGFGSYPP*LLCEK 310
            R LISN+SDALD +R+ES+ + + ++   E  I IIP   P +L+I+D+GIGM   +L++ LGT AKSG   F+   A   D   + G FG G Y   ++ +K
Sbjct:   37 RELISNASDALDKLRYESIAKPELMEKGGEPKIRIIPKKAPDTLTIVDNGIGMDRQELIDNLGTIAKSGTKSFISKLAETKDSAGLIGQFGVGFYAAFMVADK 139          
BLAST of EY728782 vs. ExPASy Swiss-Prot
Match: HTPG_RHOP5 (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain BisA53) GN=htpG PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.625e-12
Identity = 40/103 (38.83%), Postives = 62/103 (60.19%), Query Frame = 2
Query:    5 RPLISNSSDALDXIRFESLTEQKQLDAQXELFIHIIP**XPHSLSIIDSGIGMT*ADLVEXLGTXAKSGEPEFMEGFAAGADFT*M-GPFGFGSYPP*LLCEK 310
            R LISN SDALD +R+E++++   ++A     I I+P   P +LS+ID+GIGM   +L++ LGT AKSG   F+       D + + G FG G Y   ++ ++
Sbjct:   37 RELISNGSDALDKLRYEAISKPDLMEAGGTPKIQIVPKKAPDTLSVIDNGIGMDRQELIDNLGTIAKSGTKSFLTKLTEAKDGSNLIGQFGVGFYAAFMVADR 139          
BLAST of EY728782 vs. ExPASy Swiss-Prot
Match: HTPG_MYXXD (Chaperone protein htpG OS=Myxococcus xanthus (strain DK 1622) GN=htpG PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.625e-12
Identity = 43/105 (40.95%), Postives = 63/105 (60.00%), Query Frame = 2
Query:    5 RPLISNSSDALDXIRFESLTEQKQLDAQXELFIHIIP**XPHSLSIIDSGIGMT*ADLVEXLGTXAKSGEPEFMEGFAAGA---DFT*MGPFGFGSYPP*LLCEK 310
            R L+SN+SDALD +RF ++TE + L  +  L + +IP     +L+I D+GIGM+  +LV+ LGT A SG  EF+E  A      D   +G FG G Y   L+ ++
Sbjct:   38 RELVSNASDALDKLRFRAITEPELLADEPALELRLIPDEAKGTLTIEDTGIGMSHDELVKNLGTIAHSGSREFIEALAQKGQQKDMQLIGQFGVGFYSAYLVADR 142          
BLAST of EY728782 vs. ExPASy Swiss-Prot
Match: HTPG_RHOPS (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain BisB5) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.253e-11
Identity = 40/95 (42.11%), Postives = 56/95 (58.95%), Query Frame = 2
Query:    5 RPLISNSSDALDXIRFESLTEQKQLDAQXELFIHIIP**XPHSLSIIDSGIGMT*ADLVEXLGTXAKSGEPEFMEGFAAGADFT*M-GPFGFGSY 286
            R LISN+SDALD +R+ES+     ++A     I I+P   P +L++ID+GIGM   +L++ LGT AKSG   F+       D   + G FG G Y
Sbjct:   37 RELISNASDALDKLRYESIATPALMEAGGAPKIQIVPRKAPDTLTVIDNGIGMNRQELIDNLGTIAKSGTKSFLTKLTEAKDGAGLIGQFGVGFY 131          
BLAST of EY728782 vs. ExPASy Swiss-Prot
Match: HTPG_RHOPB (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain BisB18) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.253e-11
Identity = 40/103 (38.83%), Postives = 61/103 (59.22%), Query Frame = 2
Query:    5 RPLISNSSDALDXIRFESLTEQKQLDAQXELFIHIIP**XPHSLSIIDSGIGMT*ADLVEXLGTXAKSGEPEFMEGFAAGADFT*M-GPFGFGSYPP*LLCEK 310
            R LISN+SDALD +R+ES+ + + +    E  I I+P   P +LS+ID+G+GM   +L++ LGT AKSG   F+       D   + G FG G Y   ++ ++
Sbjct:   37 RELISNASDALDKLRYESIAKPELMADGGEPKIRILPKKEPDTLSVIDNGLGMDRQELIDNLGTIAKSGTKSFLTKLTEAKDGAGLIGQFGVGFYAAFMVADR 139          
BLAST of EY728782 vs. ExPASy Swiss-Prot
Match: HTPG_MAGSA (Chaperone protein htpG OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=htpG PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.253e-11
Identity = 41/104 (39.42%), Postives = 61/104 (58.65%), Query Frame = 2
Query:    5 RPLISNSSDALDXIRFESLTEQKQLDAQXELFIHIIP**XPHSLSIIDSGIGMT*ADLVEXLGTXAKSGEPEFMEGFAAGA--DFT*MGPFGFGSYPP*LLCEK 310
            R LISN+SD+ D +R+ ++TE   LD   E  I ++P     +L+IID+G GM+  +L+  LGT AKSG  EF+      A  D + +G FG G Y   ++ E+
Sbjct:   32 RELISNASDSCDRLRYGAITEPDLLDGDSEFRIRLVPDKDAGTLTIIDNGQGMSHDELIANLGTIAKSGTSEFLARLTGDAKKDVSLIGQFGVGFYSAFMVAEE 135          
BLAST of EY728782 vs. ExPASy Swiss-Prot
Match: HTPG_PELPD (Chaperone protein htpG OS=Pelobacter propionicus (strain DSM 2379) GN=htpG PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.138e-11
Identity = 41/105 (39.05%), Postives = 65/105 (61.90%), Query Frame = 2
Query:    5 RPLISNSSDALDXIRFESLTEQKQLDAQXELFIHIIP**XPHSLSIIDSGIGMT*ADLVEXLGTXAKSGEPEFMEGF---AAGADFT*MGPFGFGSYPP*LLCEK 310
            R LISNSSDA+D IRFE+ + ++ L+   +  I +IP     +L+I+D+GIGMT A++ E +GT A+SG   FM+     +A  +   +G FG G Y   ++ ++
Sbjct:   32 RELISNSSDAIDKIRFEAHSNEELLEGNSDWKIKLIPDKDAGTLTILDNGIGMTMAEVEENIGTIARSGTKAFMQALKDKSATDNPELIGQFGVGFYASFMVADR 136          
BLAST of EY728782 vs. ExPASy Swiss-Prot
Match: ENPL_HORVU (Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.792e-11
Identity = 44/98 (44.90%), Postives = 58/98 (59.18%), Query Frame = 2
Query:    5 RPLISNSSDALDXIRFESLTEQKQLD----AQXELFIHIIP**XPHSLSIIDSGIGMT*ADLVEXLGTXAKSGEPEFMEGFAAGADFT*MGPFGFGSY 286
            R LISN+SDALD IRF +LT+++ +     A+ E+ I +        LSI D G+GMT  DL++ LGT AKSG   F+E    G D   +G FG G Y
Sbjct:  106 RELISNASDALDKIRFLALTDKEVMGEGDTAKLEIQIKLDK--ENKILSIRDRGVGMTKEDLIKNLGTIAKSGTSAFVEKMQTGGDLNLIGQFGVGFY 201          
The following BLAST results are available for this feature:
BLAST of EY728782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
H90B2_HUMAN2.284e-1355.41Putative heat shock protein HSP 90-beta 2 OS=Homo ... [more]
H90B3_HUMAN2.983e-1354.55Putative heat shock protein HSP 90-beta-3 OS=Homo ... [more]
HTPG_RHOPA5.088e-1341.75Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_RHOP55.625e-1238.83Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_MYXXD5.625e-1240.95Chaperone protein htpG OS=Myxococcus xanthus (stra... [more]
HTPG_RHOPS1.253e-1142.11Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_RHOPB1.253e-1138.83Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_MAGSA1.253e-1139.42Chaperone protein htpG OS=Magnetospirillum magneti... [more]
HTPG_PELPD2.138e-1139.05Chaperone protein htpG OS=Pelobacter propionicus (... [more]
ENPL_HORVU2.792e-1144.90Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-E06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728782 ID=EY728782; Name=EY728782; organism=Citrus sinensis; type=EST; length=803bp
CACGCGTCCGCTCATCAGCAACTCCTCCGATGCATTGGATANGATCAGAT
TTGAAAGCTTGACAGAACAGAAGCAGCTAGATGCCCAANCAGAGCTTTTC
ATTCACATTATCCCCTGATAGANNCCACACTCATTGTCTATTATTGACAG
TGGTATTGGCATGACTTAGGCTGATTTGGTGGAACANCTGGGTACANNTG
CTAAGTCTGGGGAACCNGAGTTCATGGAGGGCTTTGCTGCTGGGGCCGAT
TTTACCTAAATGGGCCCCTTTGGGTTTGGGTCTTACCCCCCTTAATTGTT
GTGTGAAAAGGGTTTTGTTTCCCCCCCCCCCCCCCATTTATAGCCCTCTC
CTGGGGGGTTCTCGGGCGGTGGGTATTTCTGGTTGTCACGGGAATTTTGG
TGGGGTTCTTTGGGCGGGGGGAAAAAAATTCTTCCCCCTTCGGGGAACAC
CCTTTTTTCCTCCTTGGGCCCCCTTTAGGGTTTTTTTTTTAAACCCCCCC
CTTTTTTTTTTTCCCCCACTCCTTCCGGTTGGAGGAACCCCCTCAAGGGA
TTTTTTTTTTTTGGGGGGGGGAAAAAAAAAGGGGGGGGGGGGGTTTTGGG
TTTTTTTTNNAAAAAAAGGGGGGGGGAAAAAAAAAAACCCGGCGGGGGGC
TCCTCTTGGTGTGGTTGGGAAACAAAACACCCTTTTTTGGAACCCCCCCC
GAATATTAAAAAAAAAGGGTGCTTCTCTAAAATTTTTTTATTTGGGGGGG
ACCACCTTGTGAAAACCCCTTTCTGGGGGGGGCCCTTTTAGAGGGGCCTC
CTT
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