EY728782

Overview
NameEY728782
Unique NameEY728782
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length803
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728782 vs. ExPASy Swiss-Prot
Match: HTPG_RHOP2 (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain HaA2) GN=htpG PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.646e-11
Identity = 40/95 (42.11%), Postives = 55/95 (57.89%), Query Frame = 2
Query:    5 RPLISNSSDALDXIRFESLTEQKQLDAQXELFIHIIP**XPHSLSIIDSGIGMT*ADLVEXLGTXAKSGEPEFMEGFAAGADFT*M-GPFGFGSY 286
            R LISN+SDALD +R+ES+     +    E  I I+P   P +L++ID+GIGM   +L++ LGT AKSG   F+       D   + G FG G Y
Sbjct:   37 RELISNASDALDKLRYESIANPALMADGGEPKIRIVPKKAPDTLTVIDNGIGMDRQELIDNLGTIAKSGTKSFLTKLTEAKDGAGLIGQFGVGFY 131          
BLAST of EY728782 vs. ExPASy Swiss-Prot
Match: HTPG_AERS4 (Chaperone protein htpG OS=Aeromonas salmonicida (strain A449) GN=htpG PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.646e-11
Identity = 39/104 (37.50%), Postives = 61/104 (58.65%), Query Frame = 2
Query:    5 RPLISNSSDALDXIRFESLTEQKQLDAQXELFIHIIP**XPHSLSIIDSGIGMT*ADLVEXLGTXAKSGEPEFMEGFAA--GADFT*MGPFGFGSYPP*LLCEK 310
            R LISN+SDA D +RF++L++    +   +L + ++      +L+I D+GIGMT   ++E LGT AKSG  EF +  +   G D   +G FG G Y   ++ +K
Sbjct:   36 RELISNASDAADKLRFKALSDASLFENDGQLRVRLVVDKENRTLTISDNGIGMTRDQVIEHLGTIAKSGTAEFFKNLSGDQGRDSQLIGQFGVGFYSAFIVADK 139          
BLAST of EY728782 vs. ExPASy Swiss-Prot
Match: HTPG_AERHH (Chaperone protein htpG OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=htpG PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.646e-11
Identity = 39/104 (37.50%), Postives = 61/104 (58.65%), Query Frame = 2
Query:    5 RPLISNSSDALDXIRFESLTEQKQLDAQXELFIHIIP**XPHSLSIIDSGIGMT*ADLVEXLGTXAKSGEPEFMEGFAA--GADFT*MGPFGFGSYPP*LLCEK 310
            R LISN+SDA D +RF++L++    +   +L + ++      +L+I D+GIGMT   ++E LGT AKSG  EF +  +   G D   +G FG G Y   ++ +K
Sbjct:   36 RELISNASDAADKLRFKALSDASLFENDGQLRVRLVVDKENRTLTISDNGIGMTRDQVIEHLGTIAKSGTAEFFKNLSGDQGRDSQLIGQFGVGFYSAFIVADK 139          
BLAST of EY728782 vs. ExPASy Swiss-Prot
Match: ENPL_ARATH (Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.762e-11
Identity = 46/105 (43.81%), Postives = 60/105 (57.14%), Query Frame = 2
Query:    5 RPLISNSSDALDXIRFESLTEQKQLD----AQXELFIHIIP**XPHSLSIIDSGIGMT*ADLVEXLGTXAKSGEPEFMEGFAAGADFT*MGPFGFGSYPP*LLCE 307
            R LISN+SDALD IRF +LT++  L     A+ E+ I +        LSI D GIGMT  DL++ LGT AKSG   F+E   +  D   +G FG G Y   L+ +
Sbjct:  105 RELISNASDALDKIRFLALTDKDVLGEGDTAKLEIQIKLDK--AKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQSSGDLNLIGQFGVGFYSAYLVAD 207          
BLAST of EY728782 vs. ExPASy Swiss-Prot
Match: ENPL_CATRO (Endoplasmin homolog OS=Catharanthus roseus GN=HSP90 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.220e-11
Identity = 45/98 (45.92%), Postives = 57/98 (58.16%), Query Frame = 2
Query:    5 RPLISNSSDALDXIRFESLTEQKQLD----AQXELFIHIIP**XPHSLSIIDSGIGMT*ADLVEXLGTXAKSGEPEFMEGFAAGADFT*MGPFGFGSY 286
            R LISN+SDALD IRF +LT+++ L     A+ E+ I +        LSI D GIGMT  DL++ LGT AKSG   F+E      D   +G FG G Y
Sbjct:  106 RELISNASDALDKIRFLALTDKEILGEGDTAKLEIQIKLDK--EKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFY 201          
BLAST of EY728782 vs. ExPASy Swiss-Prot
Match: HS904_HUMAN (Putative heat shock protein HSP 90-alpha A4 OS=Homo sapiens GN=HSP90AA4P PE=5 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.123e-11
Identity = 39/86 (45.35%), Postives = 51/86 (59.30%), Query Frame = 2
Query:   53 ESLTEQKQLDAQXELFIHIIP**XPHSLSIIDSGIGMT*ADLVEXLGTXAKSGEPEFMEGFAAGADFT*MGPFGFGSYPP*LLCEK 310
            ESLT+  +LD+  E  I +IP     +L+I+D+GIGMT ADL+  LGT  KS    FME   AGAD + +G F  G Y    + EK
Sbjct:    2 ESLTDPSKLDSGKEPHISLIPNKQDRTLTIVDTGIGMTKADLINNLGTITKSETKVFMEVLQAGADISMIGQFSVGFYSAYSVAEK 87          
BLAST of EY728782 vs. ExPASy Swiss-Prot
Match: ENPL_PIG (Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 8.123e-11
Identity = 44/107 (41.12%), Postives = 59/107 (55.14%), Query Frame = 2
Query:    5 RPLISNSSDALDXIRFESLTEQKQLDAQXELFIHIIP**XPHSLSIIDSGIGMT*ADLVEXLGTXAKSGEPEFMEGFAAGAD-----FT*MGPFGFGSYPP*LLCEK 310
            R LISN+SDALD IR  SLT++  L    EL + I      + L + D+G+GMT  +LV+ LGT AKSG  EF+   A   +        +G FG G Y   L+ +K
Sbjct:  102 RELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMAEAQEDGQSTSELIGQFGVGFYSAFLVADK 208          
The following BLAST results are available for this feature:
BLAST of EY728782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
HTPG_RHOP23.646e-1142.11Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_AERS43.646e-1137.50Chaperone protein htpG OS=Aeromonas salmonicida (s... [more]
HTPG_AERHH3.646e-1137.50Chaperone protein htpG OS=Aeromonas hydrophila sub... [more]
ENPL_ARATH4.762e-1143.81Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD... [more]
ENPL_CATRO6.220e-1145.92Endoplasmin homolog OS=Catharanthus roseus GN=HSP9... [more]
HS904_HUMAN8.123e-1145.35Putative heat shock protein HSP 90-alpha A4 OS=Hom... [more]
ENPL_PIG8.123e-1141.12Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-E06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728782 ID=EY728782; Name=EY728782; organism=Citrus sinensis; type=EST; length=803bp
CACGCGTCCGCTCATCAGCAACTCCTCCGATGCATTGGATANGATCAGAT
TTGAAAGCTTGACAGAACAGAAGCAGCTAGATGCCCAANCAGAGCTTTTC
ATTCACATTATCCCCTGATAGANNCCACACTCATTGTCTATTATTGACAG
TGGTATTGGCATGACTTAGGCTGATTTGGTGGAACANCTGGGTACANNTG
CTAAGTCTGGGGAACCNGAGTTCATGGAGGGCTTTGCTGCTGGGGCCGAT
TTTACCTAAATGGGCCCCTTTGGGTTTGGGTCTTACCCCCCTTAATTGTT
GTGTGAAAAGGGTTTTGTTTCCCCCCCCCCCCCCCATTTATAGCCCTCTC
CTGGGGGGTTCTCGGGCGGTGGGTATTTCTGGTTGTCACGGGAATTTTGG
TGGGGTTCTTTGGGCGGGGGGAAAAAAATTCTTCCCCCTTCGGGGAACAC
CCTTTTTTCCTCCTTGGGCCCCCTTTAGGGTTTTTTTTTTAAACCCCCCC
CTTTTTTTTTTTCCCCCACTCCTTCCGGTTGGAGGAACCCCCTCAAGGGA
TTTTTTTTTTTTGGGGGGGGGAAAAAAAAAGGGGGGGGGGGGGTTTTGGG
TTTTTTTTNNAAAAAAAGGGGGGGGGAAAAAAAAAAACCCGGCGGGGGGC
TCCTCTTGGTGTGGTTGGGAAACAAAACACCCTTTTTTGGAACCCCCCCC
GAATATTAAAAAAAAAGGGTGCTTCTCTAAAATTTTTTTATTTGGGGGGG
ACCACCTTGTGAAAACCCCTTTCTGGGGGGGGCCCTTTTAGAGGGGCCTC
CTT
back to top