EY728779

Overview
NameEY728779
Unique NameEY728779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PSMR_SULIL (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=pan PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.718e-38
Identity = 96/217 (44.24%), Postives = 133/217 (61.29%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR-GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIR--HVQPSEIHSXQELSAK 677
            P   KT++A+AVA+E+   F+ V   E   K+VGE  + VR LF  A+  APSIIF DEID + A R    + G     R + QLL ELDG +   NV +IAATNR D +DPALLRPGRFDR++ V  P+   R EIF I+L+K+    ++N+  L+ LSEG +GADI  +C EAA  AI +    +++TM+ L  AI   +V+ + + S +E   K
Sbjct:  177 PGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDG--RNKVTMKDLVDAITKINVKRNNMESMKERREK 391          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PSMR_SULIK (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=pan PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.718e-38
Identity = 96/217 (44.24%), Postives = 133/217 (61.29%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR-GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIR--HVQPSEIHSXQELSAK 677
            P   KT++A+AVA+E+   F+ V   E   K+VGE  + VR LF  A+  APSIIF DEID + A R    + G     R + QLL ELDG +   NV +IAATNR D +DPALLRPGRFDR++ V  P+   R EIF I+L+K+    ++N+  L+ LSEG +GADI  +C EAA  AI +    +++TM+ L  AI   +V+ + + S +E   K
Sbjct:  177 PGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDG--RNKVTMKDLVDAITKINVKRNNMESMKERREK 391          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PSMR_SULIA (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.27) GN=pan PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.718e-38
Identity = 96/217 (44.24%), Postives = 133/217 (61.29%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR-GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIR--HVQPSEIHSXQELSAK 677
            P   KT++A+AVA+E+   F+ V   E   K+VGE  + VR LF  A+  APSIIF DEID + A R    + G     R + QLL ELDG +   NV +IAATNR D +DPALLRPGRFDR++ V  P+   R EIF I+L+K+    ++N+  L+ LSEG +GADI  +C EAA  AI +    +++TM+ L  AI   +V+ + + S +E   K
Sbjct:  177 PGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDG--RNKVTMKDLVDAITKINVKRNNMESMKERREK 391          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: FTSH8_ORYSJ (Cell division protease ftsH homolog 8, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH8 PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.718e-38
Identity = 88/204 (43.14%), Postives = 128/204 (62.75%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDR--VMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNI--RELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHV 635
            P   KTL+A+A A E+G+ FL++ G +    +VG     VR+LF +AR  APSIIF DEID +   RG+     S  +R   ++QLLVE+DG      V V+A TNRPD +D ALLRPGRFDR + +  P+   R++IFRI+L+K+   ++ +   + LA L+ G  GADI+ +C EAA+ A     + ++ITMQH ++AI  +
Sbjct:  377 PGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGSNDERESTLNQLLVEMDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARS--EETQITMQHFESAIDRI 578          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PEX1_PICPA (Peroxisome biosynthesis protein PAS1 OS=Pichia pastoris GN=PEX1 PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.244e-38
Identity = 82/183 (44.81%), Postives = 120/183 (65.57%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 584
            P C KTL+A AVA++ GLNF+++KGPE+ +K++G SE++VR LF +A+A  P I+FFDE D +A  RG +S G  V+DRV++Q+L ++DG      V V+AAT+RPD ID ALLRPGR D+ +    P+  DR +I +   R +  S  VN+  +A    G +GAD+  +   A + A+ E L
Sbjct:  842 PGCGKTLLASAVAAQCGLNFISIKGPEILNKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTG--VTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDRLDILQSVTRNMNVSKSVNLSSVAGECSGFSGADLQALAYNAYLKAVHEKL 1022          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PRS8_YEAST (26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae GN=RPT6 PE=1 SV=4)

HSP 1 Score: 159.073 bits (401), Expect = 2.931e-38
Identity = 88/201 (43.78%), Postives = 119/201 (59.20%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV-SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHV 635
            P   KTL+ARAVA      F+ V G EL  K++GE  + VR LF  AR +APSIIF DEID + + R + S G  S   R M +LL +LDG     N+ +I ATNR D +DPALLRPGR DR +   PP+   R EI RIH RK+  +  +N+R++A    GC+GAD+  +C EA + A+ E      +T +  + A+  V
Sbjct:  191 PGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRER--RIHVTQEDFELAVGKV 389          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PEX6_CANGA (Peroxisomal biogenesis factor 6 OS=Candida glabrata GN=PEX6 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.931e-38
Identity = 86/182 (47.25%), Postives = 117/182 (64.29%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN-VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE-EIFRIHLRKIPCSSDVNIRELAC-LSEGCTGADISLICREAAISAI 572
            P   KTL+A+A+A+   LNF +VKGPEL + ++GESE  VR +F KAR   P +IFFDE+D +A  RG + D   V DR++SQLL ELDG+    + V +I ATNRPD +D ALLRPGRFD+L+Y+G  +  +++  I R   RK   SSD+N  EL        TGAD   +C +A + A+
Sbjct:  760 PGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDEVDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSDGDGVFIIGATNRPDLLDEALLRPGRFDKLIYLGIADTREKQANIMRALTRKFKVSSDINFDELVSDFPFSYTGADFYALCSDAMLKAM 941          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.828e-38
Identity = 89/201 (44.28%), Postives = 124/201 (61.69%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHV 635
            P   KTL+A+AVA E   +F+ V G EL  K++GE  K VR +F  A+  +P IIF DEID +A+ R +  + G     R + QLL E+DG   R +V +IAATNRPD +DPA+LRPGRFDR++ +  P+E  R EI +IH  K+    +V++RE+A L+E   GAD+  +C EA + AI E  +   I M   K AI  +
Sbjct:  191 PGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNL-KNVDLREVAKLAENMVGADLKAVCTEAGMFAIRE--EREFIKMDDFKEAISKI 388          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PRS8_ENCCU (26S protease regulatory subunit 8 homolog OS=Encephalitozoon cuniculi GN=RPT6 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.828e-38
Identity = 86/201 (42.79%), Postives = 118/201 (58.71%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV-SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHV 635
            P   KTL+ARAVA      F+ V G EL  K++GE  + VR LF  AR +APSIIF DEID + + RG  + G  S   R M +LL +LDG     N+ VI ATNR D +DPALLR GR DR +   PPNE+ R EI +IH RK+  +  +++  +A    GC+GA++  +C EA + A+ E      +T +  + A+  V
Sbjct:  239 PGTGKTLLARAVAHHTQCKFIRVSGSELVQKYIGEGSRLVRELFIMAREHAPSIIFMDEIDSIGSTRGDSNKGSDSEVQRTMLELLNQLDGFESHNNIKVIMATNRIDILDPALLRTGRIDRKIEFPPPNESARLEILKIHSRKMNLTKGIDLETIASKMVGCSGAEVKAVCTEAGMYALRER--RVHVTQEDFEMAVHKV 437          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.000e-38
Identity = 95/217 (43.78%), Postives = 132/217 (60.83%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR-GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIR--HVQPSEIHSXQELSAK 677
            P   KT++A+AVA+E+   F+ V   E   K+VGE  + VR LF  A+  APSIIF DEID + A R    + G     R + QLL ELDG     NV +IAATNR D +DPALLRPGRFDR++ V  P+   R EIF I+L+K+    ++N+  L+ L+EG +GADI  +C EAA  AI +    +++TM  L  AI   +V+ +++ S +E   K
Sbjct:  177 PGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAIRDG--RNKVTMNDLVEAINKINVKRNKMESMKERREK 391          
The following BLAST results are available for this feature:
BLAST of EY728779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 382
Match NameE-valueIdentityDescription
PSMR_SULIL1.718e-3844.24Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIK1.718e-3844.24Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIA1.718e-3844.24Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
FTSH8_ORYSJ1.718e-3843.14Cell division protease ftsH homolog 8, mitochondri... [more]
PEX1_PICPA2.244e-3844.81Peroxisome biosynthesis protein PAS1 OS=Pichia pas... [more]
PRS8_YEAST2.931e-3843.7826S protease regulatory subunit 8 homolog OS=Sacch... [more]
PEX6_CANGA2.931e-3847.25Peroxisomal biogenesis factor 6 OS=Candida glabrat... [more]
PSMR_METM73.828e-3844.28Proteasome-activating nucleotidase OS=Methanococcu... [more]
PRS8_ENCCU3.828e-3842.7926S protease regulatory subunit 8 homolog OS=Encep... [more]
PSMR_SULSO5.000e-3843.78Proteasome-activating nucleotidase OS=Sulfolobus s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-E03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728779 ID=EY728779; Name=EY728779; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGCTGGGATTTTGATGTTTGGTCCTCCCGNGTTGTAGCAAA
ACCCTCATGGCACGTGCAGTAGCTTCAGAAGCAGGGCTGAACTTCCTTGC
AGTGAAGGGTCCAGAGCTTTTTAGCAAATGGGTTGGTGAATCCGAGAAAG
CAGTGCGATCGCTGTTTGCAAAGGCTAGGGCCAATGCTCCATCAATCATA
TTTTTTGATGAAATTGATGGTCTTGCTGCCATTCGTGGGAAGGAAAGTGA
TGGGGTTTCTGTTTCTGATCGGGTTATGAGTCAACTTCTTGTTGAATTGG
ATGGCCTGCATCAAAGAGTTAATGTTACTGTTATTGCTGCTACAAATCGA
CCAGACAAGATTGATCCTGCCCTGTTGCGACCAGGACGCTTTGACAGGCT
TCTGTATGTGGGACCTCCAAATGAGACTGACCGAGAAGAAATATTCCGAA
TTCATTTGCGTAAAATTCCTTGCAGCTCTGATGTAAACATAAGAGAACTG
GCTTGCCTCTCAGAAGGCTGTACTGGGGCTGATATATCATTAATCTGCCG
AGAGGCAGCCATTTCAGCCATTGAGGAGAACCTCGATGCATCAAGAATAA
CAATGCAACACTTGAAGACTGCAATTAGACACGTACAACCATCGGAGATT
CATTCTTANCAGGAGCTCTCAGCTAAGTCCAAAGGCTTGTACACTCTAAT
GCGGAGGCTGATGAATCANGATATCACCTGCGCCCGAATAAATCATCGGA
TTGAATATGTGGTCCCTAATAAATCCATNGCACTGTTCCTATGTCGCTTC
CCAGCAGGCCTCTCACAATCAAAGTCTGGTTCAACCGGGTACTAAAGTTG
TCT
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