EY728779

Overview
NameEY728779
Unique NameEY728779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PRS8_MANSE (26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.000e-38
Identity = 91/215 (42.33%), Postives = 126/215 (58.60%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSXQELSAK 677
            P   KTL+ARAVA      F+ V G EL  K++GE  + VR LF  AR +APSIIF DEID + + R +  S G S   R M +LL +LDG     N+ VI ATNR D +DPALLRPGR DR +   PPNE  R +I +IH RK+  +  +N+R++A L  G +GA++  +C EA + A+ E      +T +  + A+  V   +  S + +S K
Sbjct:  188 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRER--RVHVTQEDFEMAVAKVMQKD--SEKNMSIK 398          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PRS8_DROME (26S protease regulatory subunit 8 OS=Drosophila melanogaster GN=Pros45 PE=1 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 5.000e-38
Identity = 91/215 (42.33%), Postives = 126/215 (58.60%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSXQELSAK 677
            P   KTL+ARAVA      F+ V G EL  K++GE  + VR LF  AR +APSIIF DEID + + R +  S G S   R M +LL +LDG     N+ VI ATNR D +DPALLRPGR DR +   PPNE  R +I +IH RK+  +  +N+R++A L  G +GA++  +C EA + A+ E      +T +  + A+  V   +  S + +S K
Sbjct:  191 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRER--RVHVTQEDFEMAVAKVMQKD--SEKNMSIK 401          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: FTSH4_SYNY3 (Cell division protease ftsH homolog 4 OS=Synechocystis sp. (strain PCC 6803) GN=slr1604 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.000e-38
Identity = 90/219 (41.10%), Postives = 125/219 (57.08%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSXQELSAKSKGL 689
            P   KTL+A+AVA EAG+ F ++ G E    +VG     VR LF +A+ANAP I+F DEID +   RG     G    ++ ++QLL E+DG      + ++AATNRPD +D AL+RPGRFDR + V  P+   R EI  +H R    S DV++ ++A  + G TGAD+S +  EAAI A   NL  + I+M  +  AI  V        + +S K K L
Sbjct:  203 PGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKANAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNTGIIIVAATNRPDVLDSALMRPGRFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDLDKIARRTPGFTGADLSNLLNEAAILAARRNL--TEISMDEVNDAIDRVLAGPEKKNRVMSEKRKTL 419          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: FTSH3_ORYSJ (Cell division protease ftsH homolog 3, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH3 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.000e-38
Identity = 87/204 (42.65%), Postives = 126/204 (61.76%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE--SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNI--RELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHV 635
            P   KTL+A+A A E+G+ FL++ G +    +VG     VR+LF +AR  +PSI+F DEID +   RG+   S G    +  ++QLLVE+DG      V V+A TNRPD +D ALLRPGRFDR + +  P+   R++IFRI+L+K+    + +   + LA L+ G  GADI+ +C EAA+ A     + + ITMQH ++AI  V
Sbjct:  362 PGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCSPSIVFIDEIDAIGRARGRGGFSGGHDERESTLNQLLVEMDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQISIDKPDIKGRDQIFRIYLKKLKLDKEPSFYSQRLAALTPGFAGADIANVCNEAALIAARS--EGTLITMQHFESAIDRV 563          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PEX1_DICDI (Peroxisome biogenesis factor 1 OS=Dictyostelium discoideum GN=pex1 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.530e-38
Identity = 79/179 (44.13%), Postives = 118/179 (65.92%), Query Frame = 3
Query:   42 CSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEE 578
            C KTL+A A+A E GLNF++VKGPEL +K++G SE+ VR +F++A +  P ++FFDE D +A  RG ++ G  V+DRV++Q L +LDG+     V V+AAT+RPD IDPALLRPGR D+ LY   P   +R +I      K+  S  +++ +L+  ++  TGAD+  +   A + +I E
Sbjct:  911 CGKTLLASAIAGECGLNFISVKGPELLNKYIGSSEQGVRDVFSRASSAKPCVLFFDEFDSIAPRRGHDNSG--VTDRVVNQFLTQLDGVEGLTGVYVLAATSRPDLIDPALLRPGRLDKSLYCNIPEFNERLDILTCLKSKMNLSPSISLEQLSTNTQYYTGADLRALMYNAQLKSIHE 1087          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.528e-38
Identity = 92/213 (43.19%), Postives = 128/213 (60.09%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVS-DRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSXQELS 671
            P C KTLMA+AVA+     F+ V G EL  K++GE  + V  LF  A+  AP+IIF DEID + A R  E+ G     +R + QLL E+DG   R NV VIAATNRPD +DPALLRPGRFDRL+ V  P+   R EI ++H RK+    +V++  +A ++EG +GAD+  I  EA + AI +    + +T +    A+  V  +E    Q ++
Sbjct:  181 PGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFEMAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFRGRLEILKVHTRKMNL-RNVDLSIIADITEGASGADLKAIATEAGMFAIRDR--RTYVTQEDFLKAVDKVLGAEKRLAQAIA 390          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PRS8_NAEFO (26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.528e-38
Identity = 87/202 (43.07%), Postives = 119/202 (58.91%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR--GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHV 635
            P   KTL+ARAVA      F+ V G EL  K++GE  K VR LF  AR +APSIIF DEID + + R  G +  G S   R M +LL +LDG     N+ +I ATNR D +DPALLRPGR DR +    PNE  R +I +IH R++  +  +N+R++A +  G +GA+I   C EA + A+ E      +T + L+ A+  V
Sbjct:  199 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTRTEGGKGGGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEFPNPNELARLDILKIHSRRMNLTRGINLRKIASMLGGASGAEIKATCTEAGMFALRER--RVHVTQEDLEMAVAKV 398          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.114e-37
Identity = 88/201 (43.78%), Postives = 123/201 (61.19%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHV 635
            P   KTL+A+AVA E   +F+ V G EL  K++GE  K VR +F  A+  +P IIF DEID +A+ R +  + G     R + QLL E+DG   R +V +IAATNRPD +DPA+LRPGRFDR++ +  P+E  R +I +IH  K+     V++RE+A L+E   GAD+  +C EA + AI E  +   I M   K AI  +
Sbjct:  191 PGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEKMNLKG-VDLREVAKLAENMVGADLKAVCTEAGMFAIRE--EREFIKMDDFKEAISKI 388          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PEX1_SCHPO (Peroxisomal ATPase pex1 OS=Schizosaccharomyces pombe GN=pex1 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.114e-37
Identity = 85/226 (37.61%), Postives = 137/226 (60.62%), Query Frame = 3
Query:    9 PLGF*CLVLPXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSE-IHSXQELSAKSK 683
            P G      P C KT +A A++S   + F+++KGPEL  K++G+SE+ VR LF++A+   P ++FFDE D +A  RG++S GV+  DRV++Q+L ++DG      V ++AAT RPD IDPALLRPGR D+L++   PNE +R E+ +    +    +   +++L+ L++G T AD+S +  +A + A+ + L          + +I  V PS+   S   L+ +SK
Sbjct:  640 PTGILLFGYPGCGKTYLASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVAPRRGQDSTGVT--DRVVNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVLQKLANRFHIENAAMLKKLSTLTDGYTYADLSSLLYDAHLIAVHKLLK---------RVSINAVDPSQTTSSFTNLTTESK 854          
BLAST of EY728779 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.900e-37
Identity = 87/201 (43.28%), Postives = 123/201 (61.19%), Query Frame = 3
Query:   36 PXCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHV 635
            P   KTL+A+AVA E   +F+ V G EL  K++GE  K VR +F  A+  +P IIF DEID +A+ R +  + G     R + QLL E+DG   R +V +IAATNRPD +DPA+LRPGRFDR++ +  P+E  R EI +IH  K+     V++RE+A ++E   GAD+  +C EA + AI E  +   I M   + AI  +
Sbjct:  191 PGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNLKG-VDLREVAKIAENMVGADLKAVCTEAGMFAIRE--EREFIKMDDFREAISKI 388          
The following BLAST results are available for this feature:
BLAST of EY728779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 382
Match NameE-valueIdentityDescription
PRS8_MANSE5.000e-3842.3326S protease regulatory subunit 8 OS=Manduca sexta... [more]
PRS8_DROME5.000e-3842.3326S protease regulatory subunit 8 OS=Drosophila me... [more]
FTSH4_SYNY35.000e-3841.10Cell division protease ftsH homolog 4 OS=Synechocy... [more]
FTSH3_ORYSJ5.000e-3842.65Cell division protease ftsH homolog 3, mitochondri... [more]
PEX1_DICDI6.530e-3844.13Peroxisome biogenesis factor 1 OS=Dictyostelium di... [more]
PSMR_THEGJ8.528e-3843.19Proteasome-activating nucleotidase OS=Thermococcus... [more]
PRS8_NAEFO8.528e-3843.0726S protease regulatory subunit 8 homolog OS=Naegl... [more]
PSMR_METM61.114e-3743.78Proteasome-activating nucleotidase OS=Methanococcu... [more]
PEX1_SCHPO1.114e-3737.61Peroxisomal ATPase pex1 OS=Schizosaccharomyces pom... [more]
PSMR_METMP1.900e-3743.28Proteasome-activating nucleotidase OS=Methanococcu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-E03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728779 ID=EY728779; Name=EY728779; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGCTGGGATTTTGATGTTTGGTCCTCCCGNGTTGTAGCAAA
ACCCTCATGGCACGTGCAGTAGCTTCAGAAGCAGGGCTGAACTTCCTTGC
AGTGAAGGGTCCAGAGCTTTTTAGCAAATGGGTTGGTGAATCCGAGAAAG
CAGTGCGATCGCTGTTTGCAAAGGCTAGGGCCAATGCTCCATCAATCATA
TTTTTTGATGAAATTGATGGTCTTGCTGCCATTCGTGGGAAGGAAAGTGA
TGGGGTTTCTGTTTCTGATCGGGTTATGAGTCAACTTCTTGTTGAATTGG
ATGGCCTGCATCAAAGAGTTAATGTTACTGTTATTGCTGCTACAAATCGA
CCAGACAAGATTGATCCTGCCCTGTTGCGACCAGGACGCTTTGACAGGCT
TCTGTATGTGGGACCTCCAAATGAGACTGACCGAGAAGAAATATTCCGAA
TTCATTTGCGTAAAATTCCTTGCAGCTCTGATGTAAACATAAGAGAACTG
GCTTGCCTCTCAGAAGGCTGTACTGGGGCTGATATATCATTAATCTGCCG
AGAGGCAGCCATTTCAGCCATTGAGGAGAACCTCGATGCATCAAGAATAA
CAATGCAACACTTGAAGACTGCAATTAGACACGTACAACCATCGGAGATT
CATTCTTANCAGGAGCTCTCAGCTAAGTCCAAAGGCTTGTACACTCTAAT
GCGGAGGCTGATGAATCANGATATCACCTGCGCCCGAATAAATCATCGGA
TTGAATATGTGGTCCCTAATAAATCCATNGCACTGTTCCTATGTCGCTTC
CCAGCAGGCCTCTCACAATCAAAGTCTGGTTCAACCGGGTACTAAAGTTG
TCT
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