EY728663

Overview
NameEY728663
Unique NameEY728663
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728663 vs. ExPASy Swiss-Prot
Match: P2C30_ARATH (Probable protein phosphatase 2C 30 OS=Arabidopsis thaliana GN=PP2C5 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.695e-12
Identity = 52/162 (32.10%), Postives = 81/162 (50.00%), Query Frame = 2
Query:  212 FAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEWLQALPRALVAGFVKTDIEFQKKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGIVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIG*PDVGEFMVPFP 697
            F +FDGH G  AA F   +L NN+ +A+    S ++   ++  A+  G++KTD +F K+G   G      +I    + V++ GD R ++ ++GG    LT DH     A E +R+ A GG V   N       G  R   G L +SR IG   + E+++  P
Sbjct:  162 FGVFDGHGGSKAAEFAAMNLGNNIEAAMASARSGEDGC-SMESAIREGYIKTDEDFLKEGSRGGACCVTALISKGELAVSNAGDCRAVM-SRGGTAEALTSDHN-PSQANELKRIEALGGYVDCCN-------GVWRI-QGTLAVSRGIGDRYLKEWVIAEP 312          
BLAST of EY728663 vs. ExPASy Swiss-Prot
Match: P2C20_ARATH (Probable protein phosphatase 2C 20 OS=Arabidopsis thaliana GN=PPC3-1.2 PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 1.075e-11
Identity = 53/177 (29.94%), Postives = 92/177 (51.98%), Query Frame = 2
Query:  143 EDYFLIKPDCQRIPGNASTSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEWLQALPRALVAGFVKTDI----EFQKKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGIVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIG 661
            EDY  +  + +++ G+      +FAIFDGH G   A + + +L +N+L        +D W      A+   ++ TD     +  K G+   T VT ++IDG T+ +A+VGDSR ++ ++ G+ S L+VDH   E ++E++ + + GG       F  N  G +    G L ++R+ G
Sbjct:   46 EDY--VVSEFKKVDGH---DLGLFAIFDGHLGHDVAKYLQTNLFDNILK------EKDFWTDT-KNAIRNAYISTDAVILEQSLKLGKGGSTAVTGILIDGKTLVIANVGDSRAVM-SKNGVASQLSVDH---EPSKEQKEIESRGG-------FVSNIPGDVPRVDGQLAVARAFG 199          
BLAST of EY728663 vs. ExPASy Swiss-Prot
Match: P2C28_ARATH (Probable protein phosphatase 2C 28 OS=Arabidopsis thaliana GN=At2g34740 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.085e-11
Identity = 57/176 (32.39%), Postives = 88/176 (50.00%), Query Frame = 2
Query:  143 EDYFLIKPDCQRIPGNASTSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEWLQALPRALVAGFVKTDIEFQKK--GETSGTT-VTFVVIDGWTVTVASVGDSRCILDTQGGIVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIG 661
            ED+  I  D + + G+   +  ++AIFDGH+G   A + +  L +N+LS        D W     +A+   +  TD    +   G   G+T VT +VIDG  + VA+VGDSR IL  +  +V  +TVDH   E  +ER+ V + GG       F   + G +    G L ++R+ G
Sbjct:    2 EDF--IVADTKTVKGH---NLGLYAIFDGHSGSDVADYLQNHLFDNILS------QPDFWRNP-KKAIKRAYKSTDDYILQNVVGPRGGSTAVTAIVIDGKKIVVANVGDSRAILCRESDVVKQITVDH---EPDKERDLVKSKGG-------FVSQKPGNVPRVDGQLAMTRAFG 155          
BLAST of EY728663 vs. ExPASy Swiss-Prot
Match: P2C77_ARATH (Protein phosphatase 2C 77 OS=Arabidopsis thaliana GN=ABI2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.335e-11
Identity = 56/181 (30.94%), Postives = 87/181 (48.07%), Query Frame = 2
Query:  188 NASTSFSVFAIFDGHNGVSAAIFTKE----SLLNNVLSAIPQGASRDEWLQALPRALVAGFVKTDIEFQKKG---ETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGIVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIG*PDVGEFMVPFPLSTS 709
            N   S   F ++DGH G   A + +E    +L   ++   P+    D W +   +AL   F++ D E +      ET G+T    V+    + VA+ GDSR +L  +G     L+VDH+ + + +E  R+ A+GG+V R N   G  V       G L +SRSIG   +   ++P P  TS
Sbjct:  153 NPHLSAHFFGVYDGHGGSQVANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRVDSEIETVAHAPETVGSTSVVAVVFPTHIFVANCGDSRAVL-CRGKTPLALSVDHKPDRD-DEAARIEAAGGKVIRWN---GARVF------GVLAMSRSIGDRYLKPSVIPDPEVTS 322          
BLAST of EY728663 vs. ExPASy Swiss-Prot
Match: P2C25_ARATH (Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana GN=At2g30020 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.335e-11
Identity = 51/168 (30.36%), Postives = 88/168 (52.38%), Query Frame = 2
Query:  206 SVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEWLQALPRALVAGFVKTDIEFQKKGETSGTT--VTFVVIDGWTVTVASVGDSRCILDTQGGIVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCW--PGGLCLSRSIG*PDVGEFMVPFP 697
            ++F ++DGH GV AA F  ++L  N++  +     RDE    +  A+  G++ TD  F K+ +  G +  VT +V +G  + V++ GD R ++   GG+   L+ DHR   + +ER+R+  +GG V   + F G        W   G L +SR IG   + ++++  P
Sbjct:  169 AIFGVYDGHGGVKAAEFAAKNLDKNIVEEVV--GKRDE--SEIAEAVKHGYLATDASFLKEEDVKGGSCCVTALVNEG-NLVVSNAGDCRAVMSV-GGVAKALSSDHRPSRD-DERKRIETTGGYV---DTFHG-------VWRIQGSLAVSRGIGDAQLKKWVIAEP 319          
The following BLAST results are available for this feature:
BLAST of EY728663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
P2C30_ARATH3.695e-1232.10Probable protein phosphatase 2C 30 OS=Arabidopsis ... [more]
P2C20_ARATH1.075e-1129.94Probable protein phosphatase 2C 20 OS=Arabidopsis ... [more]
P2C28_ARATH4.085e-1132.39Probable protein phosphatase 2C 28 OS=Arabidopsis ... [more]
P2C77_ARATH5.335e-1130.94Protein phosphatase 2C 77 OS=Arabidopsis thaliana ... [more]
P2C25_ARATH5.335e-1130.36Probable protein phosphatase 2C 25 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-H07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728663 ID=EY728663; Name=EY728663; organism=Citrus sinensis; type=EST; length=862bp
CACGCGTCCGGAACCAGACTGAAGTACCCAGATGAAGGCTCCTCTTGTTC
CGCTTGCAACTTTGATCGGTCGTGAGCTGAGGAACGAAAAGATTGAGAAA
CCTTTTGTGAAGTATGGACAGGCTGCATTAGCTAAGAAAGGAGAGGATTA
CTTTCTGATAAAACCCGATTGCCAGAGGATTCCTGGAAATGCATCAACGT
CATTTTCTGTTTTTGCGATTTTTGATGGGCACAATGGTGTATCAGCTGCC
ATCTTTACAAAGGAGAGCTTATTGAATAATGTCTTGAGTGCAATCCCTCA
AGGCGCTAGTAGGGATGAGTGGCTTCAAGCACTTCCTCGGGCACTTGTCG
CAGGTTTTGTGAAAACTGACATAGAATTTCAAAAAAAAGGTGAAACTTCT
GGGACAACAGTGACATTTGTTGTGATAGATGGATGGACTGTGACTGTTGC
GTCTGTTGGTGATTCTCGATGCATATTGGACACCCAGGGAGGCATTGTTT
CACTGTTGACTGTTGATCACAGGCTGGAAGAGAATGCTGAAGAGAGGGAG
CGTGTCACTGCAAGTGGAGGTGAAGTAGGAAGGCTCAACGTTTTTGGTGG
CAATGAGGTCGGTCCCCTTCGCTGCTGGCCTGGGGGGTTATGCCTTTCAA
GGTCGATTGGGTGACCTGATGTTGGAGAGTTTATGGTACCATTCCCCCTG
TCAACAAGTAAGCTTTGAATGCTGGGAGGAGATCGTAACCCCCCCGCATC
GCTCTCGGATGCCTTCAGTCTGCTTCGGCGGCCCACTTTGTGGGGGTTAC
CTATGTTGGGCCTGCCGGTTGGGTTGCAGGGAGTCTGTGGAGTCGCGCTG
GTTGCGGAGAGC
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