EY728660

Overview
NameEY728660
Unique NameEY728660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_BACC1 (Glucose-1-phosphate adenylyltransferase OS=Bacillus cereus (strain ATCC 10987) GN=glgC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.040e-12
Identity = 44/131 (33.59%), Postives = 67/131 (51.15%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK 756
            + L GG G+RL  LTK  AKPAVP G  YR+ID  +SNC NS I  + +LTQ+    L+ ++    A ++   +  G V VL           + GTA A+ Q L  +  +    +  + G+ + + D+ K
Sbjct:   10 MLLAGGKGSRLSALTKNLAKPAVPFGGKYRIIDFTLSNCANSGIETVGILTQYQPLELHNYIGIGNAWDLD--RVSGGVTVLPPYAESSGVKWYTGTASAIYQNLNYLSQYEPEYVLILSGDHIYKMDYSK 138          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_BACAN (Glucose-1-phosphate adenylyltransferase OS=Bacillus anthracis GN=glgC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.040e-12
Identity = 44/131 (33.59%), Postives = 67/131 (51.15%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK 756
            + L GG G+RL  LTK  AKPAVP G  YR+ID  +SNC NS I  + +LTQ+    L+ ++    A ++   +  G V VL           + GTA A+ Q L  +  +    +  + G+ + + D+ K
Sbjct:   10 MLLAGGKGSRLSALTKNLAKPAVPFGGKYRIIDFTLSNCANSGIETVGILTQYQPLELHNYIGIGNAWDLD--RVSGGVTVLPPYAESSGVKWYTGTASAIYQNLNYLSQYEPEYVLILSGDHIYKMDYSK 138          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_BACAH (Glucose-1-phosphate adenylyltransferase OS=Bacillus thuringiensis (strain Al Hakam) GN=glgC PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.277e-12
Identity = 44/131 (33.59%), Postives = 67/131 (51.15%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK 756
            + L GG G+RL  LTK  AKPAVP G  YR+ID  +SNC NS I  + +LTQ+    L+ ++    A ++   +  G V VL           + GTA A+ Q L  +  +    +  + G+ + + D+ K
Sbjct:   10 MLLAGGKGSRLSALTKNLAKPAVPFGGKYRIIDFTLSNCANSGIETVGILTQYQPLELHNYIGIGNAWDLD--RVSGGVTVLPPYAESSGVKWYTGTASAIYQNLNYLSQYEPDYVLILSGDHIYKMDYSK 138          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_THELT (Glucose-1-phosphate adenylyltransferase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=glgC PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.420e-11
Identity = 47/113 (41.59%), Postives = 64/113 (56.64%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNG----FQGTADAVRQYLWVVE 690
            L L GG G RL  LT+K AKPAVP G  YRLID  +SNC+NS I  + VLTQ+    LN H++     ++   + +G V +L     P    G    ++GTA+AV Q +  V+
Sbjct:    7 LILAGGHGKRLGVLTEKIAKPAVPFGGKYRLIDFTLSNCVNSGIYHVGVLTQYRPHLLNNHINIGRPWDLD--RKKGGVTIL-----PPYLGGVAGWYRGTANAVYQNIEYVD 112          
BLAST of EY728660 vs. ExPASy Swiss-Prot
Match: GLGC_BACSU (Glucose-1-phosphate adenylyltransferase OS=Bacillus subtilis GN=glgC PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.467e-11
Identity = 42/131 (32.06%), Postives = 68/131 (51.91%), Query Frame = 1
Query:  364 LYL*GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGG*QNEGLVEVLGCQRSPENPNGFQGTADAVRQYLWVVEGHNGLGMPGVGGERLVRRDFEK 756
            + L GG G+RL  LTK  AKPAV  G  YR+ID  +SNC NS I  + +LTQ+    LN ++    A ++   +  G V VL           ++GTA ++ + L  +  ++   +  + G+ + + D+ K
Sbjct:    8 MLLAGGKGSRLSGLTKNMAKPAVSFGGKYRIIDFTLSNCSNSGIDTVGILTQYQPLELNSYIGIGSAWDLD--RYNGGVTVLPPYAESSEVKWYKGTASSIYENLNYLNQYDPEYVLILSGDHIYKMDYGK 136          
The following BLAST results are available for this feature:
BLAST of EY728660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 305
Match NameE-valueIdentityDescription
GLGC_BACC14.040e-1233.59Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_BACAN4.040e-1233.59Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_BACAH5.277e-1233.59Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_THELT3.420e-1141.59Glucose-1-phosphate adenylyltransferase OS=Thermot... [more]
GLGC_BACSU4.467e-1132.06Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-H01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728660 ID=EY728660; Name=EY728660; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGCCCATGCGTCCGCACACTCACTCAGGCTCAGCTCGCTTA
ACGATTACTGTTAACGTTAACAGATTGTACCGATTAATGGCGAGTATGGC
GTCGATCGGATCGCTCAAAGTTCCGTCATCTCCGTCAACTGCAGCAACGT
CGTCTAACTCCAACAATCACAGCCGCAGGAGTGTGGTTAAACGACTGGCG
TTCTCGTCGTCTCAGCTCTCCGGTGACAAGATTTTTTCTAAAGCTGTCAC
CGGTGATCGGCGAAGGGAGAGGCGTCCGATCGTTGTGTCTCCTCAAGCGG
TGTCGGATTCGAAAAATTCGCAGACTTGCCTTGATCCTGAAGCCAGTCGA
AGTGTTTTGGGGATTATACTTGTGAGGTGGAGCAGGGACTCGCTTGTATC
CACTTACGAAGAAGAGGGCGAAGCCTGCTGTTCCATTGGGAGCTAATTAC
AGGCTGATTGATATTCCTGTGAGCAATTGTTTGAATAGTAACATTTCAAA
GATCTATGTTCTCACTCAGTTCAATTCTGCGTCCCTGAATCGTCACCTAT
CGAGGGCGTATGCTAGCAACATGGGTGGTTGACAGAACGAAGGATTGGTT
GAAGTTCTTGGCTGCCAGCGGAGTCCAGAGAATCCCAATGGGTTTCAGGG
TACAGCTGATGCTGTGAGGCAGTATTTGTGGGTGGTTGAGGGACACAATG
GTCTGGGAATGCCCGGTGTGGGTGGTGAACGTTTGGTGCGAAGGGACTTT
GAAAAATGATGCAGGCGGCAAGAGAAACGATCCGGGTTTCAAGAAGTCTG
GCTGGCCAGGGAAGAAAAGAGGGCCAGTGGCTTGGGGGTGCTGAGGTTGA
TGACTAAGGGGCGGGGTGCAGTTGGTGTGGAACCGCGGGGGGGCCGGTGG
GAGAGGGAGG
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