EY728641
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728641 vs. ExPASy Swiss-Prot
Match: XRN2_CHICK (5'-3' exoribonuclease 2 OS=Gallus gallus GN=XRN2 PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 4.290e-54 Identity = 103/207 (49.76%), Postives = 138/207 (66.67%), Query Frame = 2 Query: 38 GYNRPTVL---SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKECXALGGYLTDGSKPSLRRVEHV 649 G+ TV+ ++ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML LATHE HF+I+RE F P + C LC Q GH +C+G + K G+ D+ D + ++ + F+ + LREYL+ E + + PF D E VDD++FMCFFVGNDFLPH+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + Sbjct: 187 GWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPHFTIIREE-FKPNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQFADSLPASEQEFIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGFVNLQRVQMI 392
BLAST of EY728641 vs. ExPASy Swiss-Prot
Match: XRN2_MOUSE (5'-3' exoribonuclease 2 OS=Mus musculus GN=Xrn2 PE=1 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.248e-53 Identity = 107/212 (50.47%), Postives = 140/212 (66.04%), Query Frame = 2 Query: 20 NYPSFKGYNRPTVLSNV--PGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKECXALGGYLTDGSKPSLRRVEHV 649 N P +K N +LS+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + Sbjct: 184 NDPGWK--NLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREE-FKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMI 392
BLAST of EY728641 vs. ExPASy Swiss-Prot
Match: XRN2_CAEBR (5'-3' exoribonuclease 2 homolog OS=Caenorhabditis briggsae GN=xrn-2 PE=3 SV=2) HSP 1 Score: 208.379 bits (529), Expect = 4.743e-53 Identity = 108/201 (53.73%), Postives = 134/201 (66.67%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK---KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKECXALGGYLTDGSKPSLRRVEHVFR 655 +NVPGEGEHKIM Y+R QR P +DPNT HCL G DADLIML +ATHE +F+I+RE F P Q C LCGQ GH C G A + GDE P+ K + FL I LREYL+ E +PN PF+ +LE +DD++F+CFFVGNDFLPH+P+LEIREGAI+ L+ +YK+ + GYLT P L RVE + R Sbjct: 201 ANVPGEGEHKIMDYIRKQRGNPAHDPNTVHCLCGADADLIMLGIATHEANFNIIREE-FVPNQPRACELCGQYGHELKECRG-----AENDTDLGDEYCKPEQREKNFIFLRIPVLREYLEKEMAMPNLPFQFNLERALDDWVFLCFFVGNDFLPHLPSLEIREGAIDRLIKLYKEMVYEMKGYLTKDGIPELDRVEMIMR 395
BLAST of EY728641 vs. ExPASy Swiss-Prot
Match: XRN2_HUMAN (5'-3' exoribonuclease 2 OS=Homo sapiens GN=XRN2 PE=1 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 8.090e-53 Identity = 106/212 (50.00%), Postives = 139/212 (65.57%), Query Frame = 2 Query: 20 NYPSFKGYNRPTVLSNV--PGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKECXALGGYLTDGSKPSLRRVEHV 649 N P +K N +LS+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIRE AI+ L+ +YK GGYLT+ +L+RV+ + Sbjct: 184 NDPGWK--NLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREE-FKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMI 392
BLAST of EY728641 vs. ExPASy Swiss-Prot
Match: XRN2_CAEEL (5'-3' exoribonuclease 2 homolog OS=Caenorhabditis elegans GN=xrn-2 PE=1 SV=2) HSP 1 Score: 206.838 bits (525), Expect = 1.380e-52 Identity = 107/201 (53.23%), Postives = 134/201 (66.67%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK---KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKECXALGGYLTDGSKPSLRRVEHVFR 655 +NVPGEGEHKIM YVR QR P +DPNT HCL G DADLIML +ATHE +F+I+RE F P Q C LCGQ GH C G A + GD+ P+ K + FL I LREYL+ E +PN PF+ D+E +DD++F+CFFVGNDFLPH+P+LEIREGAI+ L+ +YK+ + GYLT P L RVE + + Sbjct: 199 ANVPGEGEHKIMDYVRKQRGNPAHDPNTVHCLCGADADLIMLGIATHEANFNIIREE-FVPNQPRACDLCGQYGHELKECRG-----AENETDLGDDYCKPEQREKNFIFLRIPVLREYLEKELSMPNLPFKFDVERALDDWVFLCFFVGNDFLPHLPSLEIREGAIDRLIKLYKEMVYQMKGYLTKDGIPELDRVEMIMK 393
BLAST of EY728641 vs. ExPASy Swiss-Prot
Match: XRN2_PONAB (5'-3' exoribonuclease 2 OS=Pongo abelii GN=XRN2 PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 8.945e-52 Identity = 105/212 (49.53%), Postives = 138/212 (65.09%), Query Frame = 2 Query: 20 NYPSFKGYNRPTVLSNV--PGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKECXALGGYLTDGSKPSLRRVEHV 649 N P +K N +LS+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K + DE D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIRE AI+ L+ +YK GGYLT+ +L+RV+ + Sbjct: 184 NDPGWK--NLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREE-FKPNKPKPCGLCNQFGHEVKDCEGLLREKKVKHDELADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMI 392
BLAST of EY728641 vs. ExPASy Swiss-Prot
Match: XRN2_CRYNE (5'-3' exoribonuclease 2 OS=Cryptococcus neoformans GN=RAT1 PE=3 SV=3) HSP 1 Score: 203.756 bits (517), Expect = 1.168e-51 Identity = 105/198 (53.03%), Postives = 135/198 (68.18%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK--CFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK--KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKECXALGGYLTDGSKPSLRRVE 643 S+VPGEGEHKIM ++R QR+ P +D NT H +YGLDADLIML+LATHE HF +LRE VF + C CG+ GH+AANC+ K K D EV + KP+ FL + LREYL E +P PF DLE +DD+IFM FFVGNDFLPH+P+LEIREGAI++L+ +++ E +GGYLT+ K +L R + Sbjct: 204 SSVPGEGEHKIMDWIRRQRSYPTWDANTSHVIYGLDADLIMLSLATHEPHFRVLREDVFAQSSKGPHACKNCGKVGHIAANCKSDKKFK----DPNVAEVAKTEDPKPFIFLDVACLREYLAVELVVPGMPFPFDLELAIDDWIFMIFFVGNDFLPHLPSLEIREGAIDVLLKIWRAELPRMGGYLTNHGKVNLDRAQ 397
BLAST of EY728641 vs. ExPASy Swiss-Prot
Match: XRN2_DROME (5'-3' exoribonuclease 2 homolog OS=Drosophila melanogaster GN=Rat1 PE=1 SV=2) HSP 1 Score: 192.2 bits (487), Expect = 3.517e-48 Identity = 108/244 (44.26%), Postives = 143/244 (58.61%), Query Frame = 2 Query: 20 NYPSFKGYNRPTVLSNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKECXALGGYLTDGSKPSLRRVEHVFRLGDLMRIEYPEKSTSHRRLLKHPA*NAQRKEE 751 N P++KG +NVPGEGEHKIM Y+R QR P +DPNT+H L G DADLIML LATHE +F+I+RE F P + C +C GH C G + K D + + + F+ + LREYL +PN PFE E +DD++FMCFFVGNDFLPH+P+LEIREGA++ L+ +YKK GYLTD +L RV+ + + DL E + RR + A + RK + Sbjct: 186 NNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIMLGLATHEPNFTIIREE-FLPNKPRPCDICNGFGHEMDKCVGLGATAPTSANFKPDVPIGAEVKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVELYKKCVYKTRGYLTDSGDVNLDRVQLI--MTDLGNAEDQIFKSRQRREEQFKARDKARKRQ 426
BLAST of EY728641 vs. ExPASy Swiss-Prot
Match: XRN2_CANAL (5'-3' exoribonuclease 2 OS=Candida albicans GN=RAT1 PE=3 SV=3) HSP 1 Score: 177.563 bits (449), Expect = 8.965e-44 Identity = 100/231 (43.29%), Postives = 135/231 (58.44%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV-VPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKECXALGGYLTDGSKPSLRRVEHVFRLGDLMRIEYPEKSTSHRRLLKHPA*NAQRKEE 751 + VPGEGEHK+MS++R QR+ P YDPNT+HC+YGLDADLI L LATHE HF +LRE VF QDK F K + + + GD V KKP+ +LH+ LREYL E P F +LE +DD++F+CFF GNDFLPH+P+L++R+ I+ L+ +K+ L Y+T K +L+ VE + + + Y E KH A QR+EE Sbjct: 194 ATVPGEGEHKLMSFIRSQRSDPQYDPNTKHCIYGLDADLIFLGLATHEPHFRVLREDVF--ASQDKKF--------------TIKDQIADANSNGDTVAKEDKKPFLWLHVNVLREYLQVELFTPRMSFPFELERAIDDWVFLCFFAGNDFLPHLPSLDVRDNGIDTLVQCWKRSLPILKDYVTCDGKLNLKSVEVL-----MSNLAYKESEIFKN---KHAA--EQRREE 398
BLAST of EY728641 vs. ExPASy Swiss-Prot
Match: XRN2_SCHPO (5'-3' exoribonuclease 2 OS=Schizosaccharomyces pombe GN=dhp1 PE=1 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.997e-43 Identity = 94/195 (48.21%), Postives = 122/195 (62.56%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP-KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKECXALGGYLTDGSKPSLRRVE 643 ++VPGEGEHKIM ++R QR P YDPNT H +YGLDADLIML LATHE HF +LRE VF Q G E + K D+ + VP KKP+ +L++ LREYL+ E +PN PF DLE +DD++F FFVGNDFLPH+P+L+IR+GA+ L +++ +GGYLT +L R E Sbjct: 200 ASVPGEGEHKIMEFIRSQRVKPEYDPNTHHVVYGLDADLIMLGLATHEPHFRVLREDVFF-----------QQGSTKKTKEERLGIK--RLDDVSETNKVPVKKPFIWLNVSILREYLEVELYVPNLPFPFDLERAIDDWVFFIFFVGNDFLPHLPSLDIRDGAVERLTEIWRASLPHMGGYLTLDGSVNLARAE 381 The following BLAST results are available for this feature:
BLAST of EY728641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728641 ID=EY728641; Name=EY728641; organism=Citrus sinensis; type=EST; length=913bpback to top |