EY728581

Overview
NameEY728581
Unique NameEY728581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length403
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_BURA4 (Imidazole glycerol phosphate synthase subunit hisF OS=Burkholderia ambifaria (strain MC40-6) GN=hisF PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 1.511e-51
Identity = 98/133 (73.68%), Postives = 114/133 (85.71%), Query Frame = 1
Query:    4 GRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            GRVVKGV F  +RDAGDPVEIARRYD+QGADE+TFLDITA+ D RD  L  +E +ASQVFIPLTVGGGVR V+D+R LLNAGADKVS+N++AV NP+ V +AA  +GSQCIVVAIDAK+VS  GETPRWE+FT
Sbjct:   16 GRVVKGVNFVELRDAGDPVEIARRYDDQGADELTFLDITATSDQRDLILPIIEAVASQVFIPLTVGGGVRAVEDVRRLLNAGADKVSMNSSAVANPQLVRDAADKYGSQCIVVAIDAKRVSADGETPRWEVFT 148          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_ACIAD (Imidazole glycerol phosphate synthase subunit hisF OS=Acinetobacter sp. (strain ADP1) GN=hisF PE=3 SV=2)

HSP 1 Score: 201.06 bits (510), Expect = 1.511e-51
Identity = 104/134 (77.61%), Postives = 114/134 (85.07%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGV+F +IRDAGDPVE+ARRY+EQGADEITFLDITA+  GRDTT  TVERMA  VF+PLTVGGGVR V+DIR LLNAGADKVSIN+AAVFNPEFV EA+Q FG+QCIVVAIDAKK         WEIFT
Sbjct:   14 NGRVVKGVQFLDIRDAGDPVEVARRYNEQGADEITFLDITATHHGRDTTYRTVERMAESVFVPLTVGGGVRKVEDIRLLLNAGADKVSINSAAVFNPEFVQEASQRFGAQCIVVAIDAKKTG----DNTWEIFT 143          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_ALHEH (Imidazole glycerol phosphate synthase subunit hisF OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=hisF PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 1.974e-51
Identity = 101/133 (75.94%), Postives = 112/133 (84.21%), Query Frame = 1
Query:    4 GRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            GRVVKGVKF +IRDAGDPVEIARRYD  GADEITFLDITAS + RDT +  VE++ASQVFIPLTVGGG+R V DIR +LNAGADKV INTAAV  PEFV EAA+ FGSQCIVVA+DAK+VS   E  RWE+FT
Sbjct:   16 GRVVKGVKFVDIRDAGDPVEIARRYDAMGADEITFLDITASHERRDTMVQVVEKVASQVFIPLTVGGGIREVADIRRMLNAGADKVGINTAAVARPEFVAEAAERFGSQCIVVAVDAKQVSRADEPARWEVFT 148          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_BURM1 (Imidazole glycerol phosphate synthase subunit hisF OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=hisF PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 2.578e-51
Identity = 98/133 (73.68%), Postives = 113/133 (84.96%), Query Frame = 1
Query:    4 GRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            GRVVKGV F  +RDAGDPVEIARRYDEQGADE+TFLDITA+ D RD  L  +E +ASQVFIPLTVGGGVR V+D+R LLNAGADKVS+N++AV NP+ V +AA  +GSQCIVVAIDAK+VS  GE PRWE+FT
Sbjct:   16 GRVVKGVNFVELRDAGDPVEIARRYDEQGADELTFLDITATSDQRDLILPIIEAVASQVFIPLTVGGGVRAVEDVRRLLNAGADKVSMNSSAVANPQLVRDAADKYGSQCIVVAIDAKRVSADGEAPRWEVFT 148          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_BURPS (Imidazole glycerol phosphate synthase subunit hisF OS=Burkholderia pseudomallei GN=hisF PE=3 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 4.397e-51
Identity = 98/133 (73.68%), Postives = 112/133 (84.21%), Query Frame = 1
Query:    4 GRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            GRVVKGV F  +RDAGDPVEIARRYD QGADE+TFLDITA+ DGRD  L  +E +ASQVFIPLTVGGGVR V+D+R LLNAGADKVS+N++AV NP  V +AA  +GSQCIVVAIDAK+VS  GE PRWE+FT
Sbjct:   16 GRVVKGVNFVELRDAGDPVEIARRYDAQGADELTFLDITATSDGRDLILPIIEAVASQVFIPLTVGGGVRAVEDVRRLLNAGADKVSMNSSAVANPPLVRDAADKYGSQCIVVAIDAKRVSADGEPPRWEVFT 148          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_BURP8 (Imidazole glycerol phosphate synthase subunit hisF OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=hisF PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 4.397e-51
Identity = 97/133 (72.93%), Postives = 113/133 (84.96%), Query Frame = 1
Query:    4 GRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            GRVVKGV F  +RDAGDPVEIARRYDEQGADE+TFLDITA+ D RD  L  +E +ASQVFIPLTVGGGVR V+D+R LLNAGADKVS+N++AV NP+ V ++   +GSQCIVVAIDAK+VS  GETPRWE+FT
Sbjct:   16 GRVVKGVNFVELRDAGDPVEIARRYDEQGADELTFLDITATSDQRDLILPIIEAVASQVFIPLTVGGGVRAVEDVRRLLNAGADKVSMNSSAVANPQLVRDSTDKYGSQCIVVAIDAKRVSAEGETPRWEVFT 148          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_BURP6 (Imidazole glycerol phosphate synthase subunit hisF OS=Burkholderia pseudomallei (strain 668) GN=hisF PE=3 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 4.397e-51
Identity = 98/133 (73.68%), Postives = 112/133 (84.21%), Query Frame = 1
Query:    4 GRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            GRVVKGV F  +RDAGDPVEIARRYD QGADE+TFLDITA+ DGRD  L  +E +ASQVFIPLTVGGGVR V+D+R LLNAGADKVS+N++AV NP  V +AA  +GSQCIVVAIDAK+VS  GE PRWE+FT
Sbjct:   16 GRVVKGVNFVELRDAGDPVEIARRYDAQGADELTFLDITATSDGRDLILPIIEAVASQVFIPLTVGGGVRAVEDVRRLLNAGADKVSMNSSAVANPPLVRDAADKYGSQCIVVAIDAKRVSADGEPPRWEVFT 148          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_BURP1 (Imidazole glycerol phosphate synthase subunit hisF OS=Burkholderia pseudomallei (strain 1710b) GN=hisF PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 4.397e-51
Identity = 98/133 (73.68%), Postives = 112/133 (84.21%), Query Frame = 1
Query:    4 GRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            GRVVKGV F  +RDAGDPVEIARRYD QGADE+TFLDITA+ DGRD  L  +E +ASQVFIPLTVGGGVR V+D+R LLNAGADKVS+N++AV NP  V +AA  +GSQCIVVAIDAK+VS  GE PRWE+FT
Sbjct:   16 GRVVKGVNFVELRDAGDPVEIARRYDAQGADELTFLDITATSDGRDLILPIIEAVASQVFIPLTVGGGVRAVEDVRRLLNAGADKVSMNSSAVANPPLVRDAADKYGSQCIVVAIDAKRVSADGEPPRWEVFT 148          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_BURP0 (Imidazole glycerol phosphate synthase subunit hisF OS=Burkholderia pseudomallei (strain 1106a) GN=hisF PE=3 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 4.397e-51
Identity = 98/133 (73.68%), Postives = 112/133 (84.21%), Query Frame = 1
Query:    4 GRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            GRVVKGV F  +RDAGDPVEIARRYD QGADE+TFLDITA+ DGRD  L  +E +ASQVFIPLTVGGGVR V+D+R LLNAGADKVS+N++AV NP  V +AA  +GSQCIVVAIDAK+VS  GE PRWE+FT
Sbjct:   16 GRVVKGVNFVELRDAGDPVEIARRYDAQGADELTFLDITATSDGRDLILPIIEAVASQVFIPLTVGGGVRAVEDVRRLLNAGADKVSMNSSAVANPPLVRDAADKYGSQCIVVAIDAKRVSADGEPPRWEVFT 148          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_BURMS (Imidazole glycerol phosphate synthase subunit hisF OS=Burkholderia mallei (strain SAVP1) GN=hisF PE=3 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 4.397e-51
Identity = 98/133 (73.68%), Postives = 112/133 (84.21%), Query Frame = 1
Query:    4 GRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            GRVVKGV F  +RDAGDPVEIARRYD QGADE+TFLDITA+ DGRD  L  +E +ASQVFIPLTVGGGVR V+D+R LLNAGADKVS+N++AV NP  V +AA  +GSQCIVVAIDAK+VS  GE PRWE+FT
Sbjct:   16 GRVVKGVNFVELRDAGDPVEIARRYDAQGADELTFLDITATSDGRDLILPIIEAVASQVFIPLTVGGGVRAVEDVRRLLNAGADKVSMNSSAVANPPLVRDAADKYGSQCIVVAIDAKRVSADGEPPRWEVFT 148          
The following BLAST results are available for this feature:
BLAST of EY728581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIS6_BURA41.511e-5173.68Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_ACIAD1.511e-5177.61Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_ALHEH1.974e-5175.94Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BURM12.578e-5173.68Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BURPS4.397e-5173.68Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BURP84.397e-5172.93Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BURP64.397e-5173.68Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BURP14.397e-5173.68Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BURP04.397e-5173.68Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BURMS4.397e-5173.68Imidazole glycerol phosphate synthase subunit hisF... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-G08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728581 ID=EY728581; Name=EY728581; organism=Citrus sinensis; type=EST; length=403bp
AACGGTCGCGTGGTCAAGGGCGTCAAGTTCGAGAACATCCGTGACGCGGG
CGACCCGGTGGAAATCGCCCGTCGCTACGACGAACAGGGCGCTGACGAGA
TTACCTTTCTCGACATCACCGCCAGTGTCGATGGTCGCGACACCACGCTG
CATACCGTCGAGCGCATGGCCAGCCAGGTGTTTATCCCGCTGACCGTGGG
CGGTGGCGTGCGCACCGTGCAGGACATTCGCAACCTGCTGAATGCCGGCG
CGGACAAGGTATCGATCAACACTGCCGCCGTGTTCAACCCGGAGTTTGTC
GGCGAAGCCGCACAGCACTTCGGTTCGCAATGCATCGTCGTCGCCATCGA
CGCCAAGAAAGTCTCCGGTCCGGGCGAAACCCCGCGCTGGGAGATCTTCA
CCC
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