EY728489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_GEOBB (Ribosome-recycling factor OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=frr PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.201e-23 Identity = 57/150 (38.00%), Postives = 95/150 (63.33%), Query Frame = 1 Query: 316 MEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKESAD 759 M+ +I +L +E K+RTGRAS +LD I V++ G PLN +A +++ +++T++I+P+D + +E AI++S LGLNP DG+ + +P LT+E + + K + + +ED K ++R R+ A+D +KK S+ D KR EKE D Sbjct: 13 MDKSIESLRKEYQKVRTGRASTSLLDDIKVDSYGTLSPLNQVATLAIPEARTITISPWDSKMIAPIEKAIMNSNLGLNPANDGKMIRLTLPPLTEERRKDIVKQLKRDAEDAKVALRNIRRDAIDQLKKLEKDKSISEDEQKRAEKEVQD 162
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_LEUCK (Ribosome-recycling factor OS=Leuconostoc citreum (strain KM20) GN=frr PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.159e-22 Identity = 61/147 (41.50%), Postives = 89/147 (60.54%), Query Frame = 1 Query: 310 SQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKKAGSSLPXDSMKRLEKE 750 S+M+ A AL RELT +RTGRA+P +LD I VE G PLN +A +SV +++ L I P+D L+E+ AI S LGLNP DG + IP +T+E + + K V +E K S+R R+ A+D +KK +P D +++ E + Sbjct: 10 SRMQGAQDALQRELTSIRTGRANPHILDRIEVEYYGAMTPLNQVASISVPEARVLLITPFDKTALEEIIRAINMSDLGLNPSSDGNIVRLMIPQMTEEGRKDLAKQVKAEAEKAKVSVRNVRRDAMDSVKKE-KEMPEDDVRKAEND 155
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_DESDG (Ribosome-recycling factor OS=Desulfovibrio desulfuricans (strain G20) GN=frr PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.513e-22 Identity = 62/156 (39.74%), Postives = 93/156 (59.62%), Query Frame = 1 Query: 289 TVKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 T+ T +ME A+ AL RE +LRTGRAS ++D I V+ G P+N LA V+V DS+T++I P+D +E AI+ S LGL P DG+ + ++P LT+E + + KV K +ED K ++R R+ A + +KK ++ D MKR + E Sbjct: 3 TILLETEERMEKAVAALDREFGRLRTGRASTSLVDSIKVDYYGTPTPINQLASVAVPDSRTITIQPWDRGAFALVEKAIMQSDLGLTPINDGKIIRISMPPLTEERRKELVKVAKKYTEDAKVAVRNIRRDANEQIKKMEKDKAITEDDMKRGQDE 158
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_DEHSC (Ribosome-recycling factor OS=Dehalococcoides sp. (strain CBDB1) GN=frr PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.513e-22 Identity = 59/151 (39.07%), Postives = 92/151 (60.93%), Query Frame = 1 Query: 292 VKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKR 738 + + + +M A++ L +EL+ +RTGR+SP +++HI VE GV P+NHLA +S D + ++I P+D + L +E AI+ S LGL P DG + IP L++E Q M K+V K E+ K ++R R+ A+D MKK + D +KR Sbjct: 5 ILQKSEKKMSASLDVLLQELSGIRTGRSSPALVEHIRVEYAGVPTPINHLANISAPDPRYITIQPWDRSCLSAIEKAIMKSDLGLMPNNDGNIIRLNIPPLSEERRQEMIKIVNKRLEEDKIAMRNVRRDAMDEMKKLEKAKEISQDDLKR 155
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_GEOSL (Ribosome-recycling factor OS=Geobacter sulfurreducens GN=frr PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.976e-22 Identity = 58/152 (38.16%), Postives = 94/152 (61.84%), Query Frame = 1 Query: 310 SQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKESAD 759 S ME ++ +L RE K+RTGRA+ G+LD I V+ G PLN +A ++V + +T++I P++ + +E AI+++ LG P DG+ + ++P LT+E + + K + KT+ED K +IR R+ A+D +KK + D +KR EKE D Sbjct: 11 SHMEKSVESLRREYQKVRTGRANTGLLDEIRVDFYGNPSPLNQVATLAVPEPRTITIQPWETKMIPVIEKAILNANLGFTPSNDGKLIRISLPPLTEERRKEIVKSLKKTAEDAKIAIRNIRRDAIDGLKKLEKDKKISEDDLKRAEKEVQD 162
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_BACA2 (Ribosome-recycling factor OS=Bacillus amyloliquefaciens (strain FZB42) GN=frr PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.976e-22 Identity = 54/133 (40.60%), Postives = 85/133 (63.91%), Query Frame = 1 Query: 304 TVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK 702 T +ME A+ A SREL +R GRA+P +LD + VE G + PLN L+ ++V +++ L + PYD + ++E AI+ + LG+ P DG + AIPALT+E + + KVV K +E+ K ++R R+ + D +KK Sbjct: 9 TKERMEKAVAAYSRELASVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVPEARMLVVTPYDKTAIGDIEKAILKADLGVTPTSDGTIIRIAIPALTEERRKELVKVVKKYAEEAKVAVRNVRRDSNDDLKK 141
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_ALKOO (Ribosome-recycling factor OS=Alkaliphilus oremlandii (strain OhILAs) GN=frr PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.976e-22 Identity = 57/148 (38.51%), Postives = 85/148 (57.43%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 +M I AL EL +R GRA+P MLD I+VE G P+ +A ++ + + +SI PYD + L +E AI+ S LG+NP DG+ + +P LT+E + + KV KTSED K +R R+ A D +KK + + D +K + E Sbjct: 12 KMNKTINALKDELASIRAGRANPAMLDRIVVEYYGSPTPIKQIAAITAPEPRIISIQPYDGSALSSIEKAILQSDLGVNPSNDGKLIRIIVPQLTEERRKELTKVAKKTSEDAKVVLRNERRNANDRLKKMQKDNEITEDELKTAQDE 159
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_GEOSW (Ribosome-recycling factor OS=Geobacillus sp. (strain WCH70) GN=frr PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.581e-22 Identity = 55/134 (41.04%), Postives = 85/134 (63.43%), Query Frame = 1 Query: 301 TTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK 702 T +M+ A+ A +REL +R GRA+P +L+ + V+ G+ P+ LA +SV +++ L I PYD + +K++E AI+SS LGL P DG + IP LT+E + + K+V K SED K ++R R+ A D +KK Sbjct: 8 TAKEKMDKAVQAFTRELATIRAGRANPSLLEKVTVDYYGMPTPIIQLASISVPEARLLVIQPYDKSVIKDIEKAILSSDLGLTPSNDGSVIRITIPPLTEERRRELVKLVKKYSEDAKVAVRNIRRDANDELKK 141
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_STRMU (Ribosome-recycling factor OS=Streptococcus mutans GN=frr PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.403e-22 Identity = 59/155 (38.06%), Postives = 93/155 (60.00%), Query Frame = 1 Query: 292 VKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKKAG--SSLPXDSMKRLEKE 750 + E + E + +L+RE +R GRA+ +LD I VE GV PLN LA ++V +++ L ++P+D ++LK++E AI +S +G+NP DG + IPALT+E + + K V K E+ K +IR R+ A+D KK + D +K LEK+ Sbjct: 5 IVEKAKERFEQSHQSLAREFGSIRAGRANASLLDRIEVEYYGVPTPLNQLASITVPEARVLLVSPFDKSSLKDIEHAINASDIGINPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKVAIRNIRRDAMDEAKKQEKIKEITEDELKSLEKD 159
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_CHLSY (Ribosome-recycling factor OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=frr PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.403e-22 Identity = 55/131 (41.98%), Postives = 82/131 (62.60%), Query Frame = 1 Query: 310 SQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK 702 + ++ A AL L +RTGRAS +++H+ VE G+ MPLN LA +SV + + + I PYD N +K +E AI S LGLNP DG+ + +P LT+E + + K+V E+VK S+R R+ A+D +KK Sbjct: 11 AHLKKATEALRHHLASIRTGRASSALVEHLHVEAYGMTMPLNQLANISVPEPRLIVIQPYDANMIKAIEKAIQQSDLGLNPSNDGRVIRLPVPPLTEERRRELVKMVRHRVEEVKISVRNQRRDAIDDLKK 141 The following BLAST results are available for this feature:
BLAST of EY728489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728489 ID=EY728489; Name=EY728489; organism=Citrus sinensis; type=EST; length=929bpback to top |