EY728435

Overview
NameEY728435
Unique NameEY728435
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.121e-16
Identity = 44/110 (40.00%), Postives = 56/110 (50.91%), Query Frame = 1
Query:  454 RKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNETPAAAPKSSVKANSQKSVPKACLSPVQPSLNPNFN--YLNNSDQDYL 777
            R+  YRG+RQRPWGKWAAEIRDP K  RVWLGTF T               +G KAK+NFP      +  +   +N         +  ++P   PN+N  Y + S  D L
Sbjct:   86 RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFPERVQLGSNSTYYSSNQ--------IPQMEPQSIPNYNQYYHDASSGDML 187          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.191e-15
Identity = 49/119 (41.18%), Postives = 61/119 (51.26%), Query Frame = 1
Query:  400 GSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNETPAAAPKSSVKANSQKSVPKACLSPVQPSLNPNFNYLN 756
            GS   K  E +  S ER +K  YRG+RQRPWGKWAAEIRDP K  RVWLGTF T               RG KAK+NFP          +++ NS           +Q S+ P+  Y++
Sbjct:   42 GSAVTKECESSM-SLERPKK--YRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPENVGT----QTIQRNSHF---------LQNSMQPSLTYID 144          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.032e-15
Identity = 38/72 (52.78%), Postives = 43/72 (59.72%), Query Frame = 1
Query:  454 RKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNETPAAAPKSS 669
            RK  YRG+RQRPWGKWAAEIRDP K  RVWLGTF T               +G KAK+NFP     A+  S+
Sbjct:   88 RKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFPERAQLASNTST 159          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.526e-15
Identity = 39/68 (57.35%), Postives = 44/68 (64.71%), Query Frame = 1
Query:  433 KKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP 636
            +KS  R+R   YRG+RQRPWGKWAAEIRDP K  RVWLGTF+T               RG KAK+NFP
Sbjct:   61 EKSNSRQRN--YRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFP 126          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: ERF81_ARATH (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.246e-14
Identity = 50/132 (37.88%), Postives = 67/132 (50.76%), Query Frame = 1
Query:  439 STERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP-------NETPAAAPKSSVKANSQ----KSVPKACLSPVQPSLNPNFNY---------LNNSDQDY 774
            ST   R+  YRG+R+RPWG++AAEIRDP K  RVWLGTF+T              +RG KAK NFP       N  P+A   ++  AN+Q    + +  A   PV PS + +  +         LN+   DY
Sbjct:    3 STTCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRGIKAKTNFPSPLSLDLNHLPSAPSAATAAANNQPHQHQQLWFAAPPPVPPSSDHHHQHHRIFLRTGVLNDKTSDY 134          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum GN=PTI6 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.934e-14
Identity = 48/130 (36.92%), Postives = 61/130 (46.92%), Query Frame = 1
Query:  391 KSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNETPA-------AAPKSSVKANSQKSVPKACLSPVQPSLNPNFNYLNN 759
            KS G    + V      T RK+   +RG+RQRPWG+WAAEIRDPT+G RVWLGT++T              ++G  A  NFP  T A            SV     KS     LSP     + +F   +N
Sbjct:   76 KSIGDRKRRSVSPDSDVTRRKK---FRGVRQRPWGRWAAEIRDPTRGKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAVTNFPVSTTAEVTVTVTETETESVADGGDKSENDVALSPTSVLCDNDFAPFDN 202          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.902e-13
Identity = 39/89 (43.82%), Postives = 49/89 (55.06%), Query Frame = 1
Query:  427 QAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNETPAAAPKSSVKANSQK 690
            +  K    + K  YRG+RQRPWGK+AAEIRDP K G RVWLGTF+T              +RG KA +NFP E     P++      +K
Sbjct:  143 EVTKPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFPLEVGKWKPRADEGEKKRK 231          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: ERF4_TOBAC (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum GN=ERF4 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.484e-13
Identity = 37/81 (45.68%), Postives = 47/81 (58.02%), Query Frame = 1
Query:  442 TERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNETPAAAPKSSVKANS 684
            T+  ++  YRG+R+RPWG++AAEIRDP K  RVWLGTF+T               RG KAK NFP+ T   +P  S    S
Sbjct:   19 TDGVKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFPSPTENQSPSHSSTVES 99          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.484e-13
Identity = 45/122 (36.89%), Postives = 60/122 (49.18%), Query Frame = 1
Query:  367 PFTFSAGRKSHGSTAVKHVEQAKKST-----ERKRKNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNETPAAAPKSSVKANSQKSVPKACLS 714
            PF FSAG         + V    ++T     E  R   YRG+R+RPWGK+AAEIRDP K G RVWLGT+ T              +RG KA +NFP+      P+       +++ P+   S
Sbjct:   67 PFNFSAGEVKSEQREEEIVVSPAETTAAPAAELPRGRHYRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLNFPHRIGLNEPEPVRVTAKRRASPEPASS 188          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: EF107_ARATH (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana GN=ERF107 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.484e-13
Identity = 42/110 (38.18%), Postives = 60/110 (54.55%), Query Frame = 1
Query:  379 SAGRKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPT-KGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNET-PAAAPKSSVKANSQKSVPK 702
            S+   +  S  V+ V   KK+   +    YRG+R+RPWGK+AAEIRDP  KG R+WLGTF +              +RG+KA +NFP +     AP +S +   +  VP+
Sbjct:   78 SSSSSTTTSPEVETVSNRKKTKRFEETRHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFPLDAGKYDAPVNSCRKRRRTDVPQ 187          
The following BLAST results are available for this feature:
BLAST of EY728435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
EF114_ARATH9.121e-1640.00Ethylene-responsive transcription factor ERF114 OS... [more]
RAP26_ARATH1.191e-1541.18Ethylene-responsive transcription factor RAP2-6 OS... [more]
EF115_ARATH2.032e-1552.78Ethylene-responsive transcription factor ERF115 OS... [more]
EF112_ARATH4.526e-1557.35Ethylene-responsive transcription factor ERF112 OS... [more]
ERF81_ARATH2.246e-1437.88Ethylene-responsive transcription factor 12 OS=Ara... [more]
PTI6_SOLLC2.934e-1436.92Pathogenesis-related genes transcriptional activat... [more]
EF102_ARATH1.902e-1343.82Ethylene-responsive transcription factor 5 OS=Arab... [more]
ERF4_TOBAC2.484e-1345.68Ethylene-responsive transcription factor 4 OS=Nico... [more]
ERF1_TOBAC2.484e-1336.89Ethylene-responsive transcription factor 1 OS=Nico... [more]
EF107_ARATH2.484e-1338.18Ethylene-responsive transcription factor ERF107 OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-F08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728435 ID=EY728435; Name=EY728435; organism=Citrus sinensis; type=EST; length=846bp
CACGCGTCCGAGAATCCAAAACTCTCTCAAGCCAACAAAAGCAAATTTTA
CATTTAACCCATTCTCTCCTAAAAATCTTTTCTCTTTAGTGCCTGAACAA
ACCAGAAGAAACGAGAAACCTTAACCATGTGTGGAGGTGCTATCATTTCG
GGCTACATCCCGCCCACCGTGCCGGGCCGGCCAAAGAAGCTGACGGCGGA
GTATCTCTGGCCGGAGCTGAAGAGGTCATCCAACAAGAAGTACTCAAAGC
CGATCGTCGACGATGACTTCGAGGCTGATTTCCAAGGATTCAAGGACGAT
GAAGAAGAGTCTGACATTGATGGTGACGTGGACGTTGATGCCGACTTGAT
GATGGCTGATATTAAGCCTTTCACTTTCTCAGCTGGTCGCAAGTCTCATG
GATCTACAGCCGTGAAGCACGTTGAACAAGCTAAAAAATCCACAGAAAGA
AAGAGGAAGAATCAATATAGGGGAATTAGGCAGCGTCCATGGGGAAAATG
GGCTGCTGAGATCCGTGACCCCACAAAAGGGGTTCGTGTCTGGCTAGGAA
CTTTCAATACCGCTGAAGAAGCCGCTAGGGCTTATGATGCCGAGGCACGG
AGGATCCGTGGGAAGAAAGCTAAGGTTAACTTTCCAAATGAAACTCCTGC
TGCTGCTCCAAAGAGCTCAGTGAAGGCNAACTCTCAGAAATCCGTTCCCA
AAGCTTGCCTAAGCCCCGTGCAGCCAAGTTTGAACCCAAACTTCAATTAC
TTGAACAACTCCGATCAGGATTACTTACACAATGTGAGTATCTTGGAGGA
GAACCACANGTGATCAATATGGATATATGGGCCCCCCCCCTGATGA
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