EY728403

Overview
NameEY728403
Unique NameEY728403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728403 vs. ExPASy Swiss-Prot
Match: PHYDA_ECOL5 (D-phenylhydantoinase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=hyuA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.574e-11
Identity = 52/194 (26.80%), Postives = 94/194 (48.45%), Query Frame = 3
Query:   66 TRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGD-TRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP-TVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAXLAG-QVSKGAIAIGNHANLXVWEP 635
            +RP   E  AI  ++ +A+       A  A L+IVH           + A+ N   + VETCP YL          D  +F  +PP+R+   ++KLW  + DG ID++++DH   ++ +   + +G+F +   G+  ++  + + +S G   G ++ E+     S  PA L G    KG +A G+  ++ + +P
Sbjct:  210 SRPLECEAEAIARMINLAQI------AGNAPLYIVHLSNGLGLDYLRL-ARANHQPVWVETCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRISPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVVIIDP 396          
BLAST of EY728403 vs. ExPASy Swiss-Prot
Match: PHYDA_ECO7I (D-phenylhydantoinase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=hyuA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.574e-11
Identity = 52/194 (26.80%), Postives = 94/194 (48.45%), Query Frame = 3
Query:   66 TRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGD-TRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP-TVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAXLAG-QVSKGAIAIGNHANLXVWEP 635
            +RP   E  AI  ++ +A+       A  A L+IVH           + A+ N   + VETCP YL          D  +F  +PP+R+   ++KLW  + DG ID++++DH   ++ +   + +G+F +   G+  ++  + + +S G   G ++ E+     S  PA L G    KG +A G+  ++ + +P
Sbjct:  210 SRPLECEAEAIARMINLAQI------AGNAPLYIVHLSNGLGLDYLRL-ARANHQPVWVETCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRISPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVVIIDP 396          
BLAST of EY728403 vs. ExPASy Swiss-Prot
Match: PHYDA_ECO27 (D-phenylhydantoinase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=hyuA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.574e-11
Identity = 52/194 (26.80%), Postives = 94/194 (48.45%), Query Frame = 3
Query:   66 TRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGD-TRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP-TVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYG-VTLEQLASWWSERPAXLAG-QVSKGAIAIGNHANLXVWEP 635
            +RP   E  AI  ++ +A+       A  A L+IVH           + A+ N   + VETCP YL          D  +F  +PP+R+   ++KLW  + DG ID++++DH   ++ +   + +G+F +   G+  ++  + + +S G   G ++ E+     S  PA L G    KG +A G+  ++ + +P
Sbjct:  210 SRPLECEAEAIARMINLAQI------AGNAPLYIVHLSNGLGLDYLRL-ARANHQPVWVETCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRISPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVVIIDP 396          
BLAST of EY728403 vs. ExPASy Swiss-Prot
Match: PYRC_ANADE (Dihydroorotase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=pyrC PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.668e-11
Identity = 58/194 (29.90%), Postives = 89/194 (45.88%), Query Frame = 3
Query:  150 GAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDG--DTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGVTLEQLASWWSERPAXLAGQVSKGAIAIGNHANLXVWEPEAEFDLTMTILYT*SILASPPYVGRRLSGK 725
            G  LH+ H            EAK  G  +T E  PH+LA + +++      T FK  PP+R A +     E L DG +D +++DH+P     K   +  F  A  GI  L+    V     R+  +T  +L    +  PA + G +  G +A G  A++ V +  AE+ L    L   S   + P+ GRRL+G+
Sbjct:  228 GGRLHVAHVSTAGAVRAIR-EAKRRGLPVTGEVTPHHLALTDDDVAASGYSTDFKMNPPLRSADDVRACREGLADGTLDAIATDHAPHSAVEK---DVEFDAAANGIVGLETAFSVCLGLVREGALTERRLVEALTAGPARVFG-LPAGTLARGAAADVAVLDAAAEWTLDPARLQ--SKGRNTPWKGRRLAGR 414          
BLAST of EY728403 vs. ExPASy Swiss-Prot
Match: PYRC_UNCTG (Dihydroorotase OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=pyrC PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.097e-11
Identity = 52/208 (25.00%), Postives = 96/208 (46.15%), Query Frame = 3
Query:  102 ELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQFVLPVTWSYGRKYGV-TLEQLASWWSERPAXLAGQVSKGAIAIGNHANLXVWEPEAEFDLTMTILYT*SILASPPYVGRRLSG 722
            E + +++D       EG +LHI H            +AK     +T ETCPHY   + + +   +T  K  PP+R   + + + + L DG ID +++DH+P + E K      F  A  GI   + +L +  +     GV +L +  S  +  PA +     +G +  GN A++ + + +  ++     + + S   + P++GR+  G
Sbjct:  207 EEVIISRDIMLAELTEG-YLHIAHVSTAGSVELIR-QAKKKSIKVTAETCPHYFTLTDDIVKGYNTNTKMNPPLRRQEDVDAIKQGLADGTIDCIATDHAPHMEEEK---NREFDLAPFGIIGFETILSLILNELVDSGVLSLSKALSKMTSNPAKIFNLEGRGTLKEGNIADITIIDMKYSYEFKKENIVSKS--KNSPFIGRKFKG 407          
The following BLAST results are available for this feature:
BLAST of EY728403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 165
Match NameE-valueIdentityDescription
PHYDA_ECOL53.574e-1126.80D-phenylhydantoinase OS=Escherichia coli O6:K15:H3... [more]
PHYDA_ECO7I3.574e-1126.80D-phenylhydantoinase OS=Escherichia coli O7:K1 (st... [more]
PHYDA_ECO273.574e-1126.80D-phenylhydantoinase OS=Escherichia coli O127:H6 (... [more]
PYRC_ANADE4.668e-1129.90Dihydroorotase OS=Anaeromyxobacter dehalogenans (s... [more]
PYRC_UNCTG6.097e-1125.00Dihydroorotase OS=Uncultured termite group 1 bacte... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-C08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728403 ID=EY728403; Name=EY728403; organism=Citrus sinensis; type=EST; length=796bp
CCACGCGTCCGGTAAAACTCGAAGATGATACACTTGACACTCGATCTTAT
TCAACATATCTGAAGACAAGGCCACCTTCATGGGAGGAAGCGGCTATCAG
AGAACTCTTGACAGTAGCAAAGGACACGAGGACAGATGGCCCTGCAGAAG
GAGCTCATCTTCACATTGTTCATTTATCTGATGCTAGTTCTTCCTTGGAT
CTATTAATGGAAGCAAAAACTAATGGTGACAGCATAACTGTTGAGACATG
CCCGCACTACTTGGCTTTCTCAGCAGAGGAGATTCCTGATGGAGATACTC
GGTTCAAATGTGCTCCGCCCATACGTGATGCAGCAAATAAAGAAAAATTA
TGGGAGGCTCTGATGGATGGACACATTGATATGCTAAGCTCTGATCATTC
ACCAACCGTGCCAGAACTTAAACTCCTTGATGAAGGCAACTTTTTGAAAG
CTTGGGGTGGCATATCATCTTTGCAGTTTGTTCTTCCTGTCACGTGGTCT
TATGGGCGGAAATATGGAGTAACTTTAGAACAGTTAGCTTCATGGTGGAG
TGAGAGACCTGCCNAGCTTGCTGGACAAGTTTCAAAGGGTGCCATTGCAA
TTGGAAATCATGCAAACCTANTTGTATGGGAACCTGAAGCGGAGTTTGAC
TTGACAATGACCATCCTGTACACATGAAGCATCCTAGCATCTCCGCCCTA
TGTGGGAAGAAGACTCTCTGGGAAAGTACTGCCACATTCAGGGAGGNCGC
AACCCCGTATACAAAGAGGGAATCATGCTCCTGGNCCTGGGGGGGT
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