EY728325

Overview
NameEY728325
Unique NameEY728325
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length784
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_PROM0 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9301) GN=ispH PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 4.080e-60
Identity = 102/178 (57.30%), Postives = 139/178 (78.09%), Query Frame = 1
Query:   13 ELMNQQYASDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYIIXKDMKE 546
            + + + Y SD+I  +++NG+ YT G + +KLA+A+GFCWGVERAV +AYE R+ +P+E IWIT+EI+H+PS+N  L +M VK I  + G K F +V+ GDVV+LPAFGA V+EM  L++K   I+DTTCP VSKVW TVEKHKK  +TSIIHGK+ HEET+AT+SFAGKY++  D++E
Sbjct:   29 QALEEAYQSDLISSIRDNGFTYTKGRLNIKLAQAFGFCWGVERAVAMAYETRRHYPNENIWITNEIIHNPSVNDHLRKMNVKFISAKNGIKDFSLVSNGDVVILPAFGATVQEMKLLHEKGCHIIDTTCPWVSKVWHTVEKHKKHVFTSIIHGKFKHEETLATSSFAGKYLVVLDLEE 206          
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_SYNS3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain CC9311) GN=ispH PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.025e-59
Identity = 106/176 (60.23%), Postives = 134/176 (76.14%), Query Frame = 1
Query:   19 MNQQYASDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYIIXKDMKE 546
            + Q Y S +I  +++NGY  T G + V+LAEA+GFCWGVERAV +AYE R+ +P E+IWIT+EI+H+PS+N  L EM+V  I VE G K F  V  GDVV+LPAFGA V+EM  LN++   IVDTTCP VSKVWTTVEKHKK  +TSIIHGK  HEET+AT+SFAG Y++  D++E
Sbjct:   31 LEQAYQSSLIGSIRDNGYSLTHGRLKVRLAEAFGFCWGVERAVAMAYETRRHYPQERIWITNEIIHNPSVNDHLREMDVLFISVEGGVKDFSGVATGDVVILPAFGATVQEMQLLNERGCHIVDTTCPWVSKVWTTVEKHKKQSFTSIIHGKVKHEETLATSSFAGTYLVVLDLEE 206          
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_PROM9 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9312) GN=ispH PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.025e-59
Identity = 101/178 (56.74%), Postives = 138/178 (77.53%), Query Frame = 1
Query:   13 ELMNQQYASDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYIIXKDMKE 546
            + + + Y SD+I  +++NG+ Y  G + +KLA+A+GFCWGVERAV +AYE R+ +P+E IWIT+EI+H+PS+N  L +M VK I  + G K F +V+ GDVV+LPAFGA V+EM  L++K   I+DTTCP VSKVW TVEKHKK  +TSIIHGK+ HEET+AT+SFAGKY++  D++E
Sbjct:   29 QALEEAYQSDLISSIRDNGFTYNKGRLNIKLAKAFGFCWGVERAVAMAYETRRHYPNENIWITNEIIHNPSVNDHLRKMNVKFISAKNGIKDFSLVSNGDVVILPAFGATVQEMKLLHEKGCHIIDTTCPWVSKVWHTVEKHKKHVFTSIIHGKFKHEETLATSSFAGKYLVVLDLEE 206          
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_SYNPW (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain WH7803) GN=ispH PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 5.892e-59
Identity = 103/176 (58.52%), Postives = 133/176 (75.57%), Query Frame = 1
Query:   19 MNQQYASDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYIIXKDMKE 546
            + Q Y S +I  +++NGY    G + V+LA+ +GFCWGVERAV +AYE RK +P E++WIT+EI+H+PS+N  L EM V+ IPVE+G K F  V  GDVV+LPAFGA V+EM  LN++   IVDTTCP VSKVW TVEKHKK  +TSIIHGK  HEET+AT+SFAG Y++  D++E
Sbjct:   31 LEQAYQSSLIGSIRDNGYRLNHGRLQVRLAKDFGFCWGVERAVAMAYETRKHYPSERLWITNEIIHNPSVNDHLREMNVQFIPVEQGVKDFSGVTSGDVVILPAFGATVQEMQLLNERGCHIVDTTCPWVSKVWNTVEKHKKQTFTSIIHGKVKHEETLATSSFAGTYLVVLDLEE 206          
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_PROMP (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ispH PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.111e-57
Identity = 99/178 (55.62%), Postives = 135/178 (75.84%), Query Frame = 1
Query:   13 ELMNQQYASDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYIIXKDMKE 546
            + + + Y SD+I  ++ N + Y  G + +KLA+A+GFCWGVERAV +AYE R+ +PDE IWIT+EI+H+PS+N  L +M VK I  + G K F +V+ GDVV+LPAFGA V+EM  L++K   I+DTTCP VSKVW TVEKHKK  +TSIIHGK+ HEET+AT+SFA KY++  +++E
Sbjct:   29 QALEEAYQSDLITSIRNNSFTYKKGRLNIKLAQAFGFCWGVERAVAMAYETRRHYPDENIWITNEIIHNPSVNDHLRKMNVKFISAKNGIKDFSLVSDGDVVILPAFGATVQEMKLLHEKGCHIIDTTCPWVSKVWHTVEKHKKHTFTSIIHGKFKHEETLATSSFADKYLVVLNLEE 206          
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_PROMM (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9313) GN=ispH PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.111e-57
Identity = 102/176 (57.95%), Postives = 133/176 (75.57%), Query Frame = 1
Query:   19 MNQQYASDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYIIXKDMKE 546
            + + Y S +I  +++NGY    G + VKLAEA+GFCWGVERAV +AYE R+ +P E+IWIT+EI+H+PS+N+ L EM+V  I  E G K F  VN GDVV+LPAFGA V+EM  L+++   I+DTTCP VSKVW TVEKHKK ++TSIIHGK  HEET+AT+SFAG Y++  D+ E
Sbjct:   31 LEKAYQSSLIGSIRDNGYVLQHGRLQVKLAEAFGFCWGVERAVAMAYETRRHYPSERIWITNEIIHNPSVNEHLREMDVLFIHAEGGVKDFSCVNDGDVVILPAFGATVQEMELLHERGCHIIDTTCPWVSKVWHTVEKHKKQEFTSIIHGKVKHEETLATSSFAGTYLVVLDLDE 206          
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_PROM5 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9515) GN=ispH PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.111e-57
Identity = 100/176 (56.82%), Postives = 133/176 (75.57%), Query Frame = 1
Query:   19 MNQQYASDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYIIXKDMKE 546
            + + Y SD+I  ++EN + +  G + +KLA+++GFCWGVERAV +AYE R+ +P+E IW+T+EI+H+PS+N  L  M VKII  + G K F  V+ GDVV+LPAFGA V+EM  L++K  QI+DTTCP VSKVW TVEKHKK  +TSIIHGKY HEET+AT SFAG Y++  D+ E
Sbjct:   31 LGESYQSDLIASIRENNFSFEKGRLKIKLAKSFGFCWGVERAVAMAYETRRHYPNEDIWMTNEIIHNPSVNNHLSRMNVKIISAKNGIKDFSSVSTGDVVILPAFGATVQEMQLLHEKKCQIIDTTCPWVSKVWHTVEKHKKHTFTSIIHGKYKHEETLATRSFAGNYLVVFDLDE 206          
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_PROM4 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9211) GN=ispH PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.475e-57
Identity = 100/178 (56.18%), Postives = 135/178 (75.84%), Query Frame = 1
Query:   13 ELMNQQYASDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYIIXKDMKE 546
            + + + Y S++I  +++NGY +  G + VKLAEA+GFCWGVERAV +AYE R+ +P E IWIT+EI+H+PS+N  L  M V+ I  E+G K F  V +GDVV+LPAFGA V+EM  L+++   I+DTTCP VSKVW TVEKHKK ++TSIIHGK  HEET+AT+SFAG Y++  D++E
Sbjct:   29 QALEKAYQSNLIGSIRDNGYLFEHGRLRVKLAEAFGFCWGVERAVAMAYETRRHYPKESIWITNEIIHNPSVNDHLRNMNVRFISAEKGIKNFSSVQEGDVVILPAFGATVQEMKLLHERGCHIIDTTCPWVSKVWHTVEKHKKHEFTSIIHGKVKHEETLATSSFAGTYLVVLDLEE 206          
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_PROM3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9303) GN=ispH PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 4.222e-57
Identity = 101/176 (57.39%), Postives = 133/176 (75.57%), Query Frame = 1
Query:   19 MNQQYASDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYIIXKDMKE 546
            + + Y S +I  +++NGY    G + VKLAEA+GFCWGVERAV +AYE R+ +P E+IWIT+EI+H+PS+N+ L EM+V  I  E G K F  V+ GDVV+LPAFGA V+EM  L+++   I+DTTCP VSKVW TVEKHKK ++TSIIHGK  HEET+AT+SFAG Y++  D+ E
Sbjct:   31 LEKAYQSSLIGSIRDNGYVLQHGRLQVKLAEAFGFCWGVERAVAMAYETRRHYPSERIWITNEIIHNPSVNEHLREMDVLFIHAEGGVKDFSCVSDGDVVILPAFGATVQEMELLHERGCHIIDTTCPWVSKVWHTVEKHKKQEFTSIIHGKVKHEETLATSSFAGTYLVVLDLDE 206          
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_PROMA (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus GN=ispH PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 6.517e-57
Identity = 100/178 (56.18%), Postives = 133/178 (74.72%), Query Frame = 1
Query:   13 ELMNQQYASDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYIIXKDMKE 546
            + + + Y S++I  +++NGY    G + VKLAEA+GFCWGVERAV +AYE R+ +P E IWIT+EI+H+PS+N  L  M V+ I  E+G K F  V +GDVV+LPAFGA V EM  L+++   I+DTTCP VSKVW TVEKHKK +++SIIHGK  HEET+AT+SFAG Y++  D+KE
Sbjct:   29 QALEKAYQSNLIASIRDNGYLLEHGRLRVKLAEAFGFCWGVERAVAMAYETRRHYPTESIWITNEIIHNPSVNDHLRNMNVRFISAEKGIKDFSSVEEGDVVILPAFGATVHEMKLLHERGCHIIDTTCPWVSKVWHTVEKHKKHEFSSIIHGKVKHEETLATSSFAGTYLVVLDLKE 206          

HSP 2 Score: 22.7126 bits (47), Expect = 6.517e-57
Identity = 17/42 (40.48%), Postives = 20/42 (47.62%), Query Frame = 3
Query:  648 LIQAEYVCDYILGGELYGSTLTKEASLRNSRNPFKRVDPDVD 773
            L +A+YV DYILG       L      R SR   +  DPD D
Sbjct:  204 LKEAQYVSDYILGKGNRDDFLR-----RFSRASSQGFDPDRD 240          
The following BLAST results are available for this feature:
BLAST of EY728325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
ISPH_PROM04.080e-6057.304-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_SYNS32.025e-5960.234-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_PROM92.025e-5956.744-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_SYNPW5.892e-5958.524-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_PROMP1.111e-5755.624-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_PROMM1.111e-5757.954-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_PROM51.111e-5756.824-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_PROM42.475e-5756.184-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_PROM34.222e-5757.394-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_PROMA6.517e-5756.184-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-C09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728325 ID=EY728325; Name=EY728325; organism=Citrus sinensis; type=EST; length=784bp
CCACGCGTCCGAGAGCTCATGAATCAACAGTACGCAAGTGATATTATAAA
GAAATTGAAGGAGAATGGATACGAGTATACGTGGGGAAATGTTACGGTGA
AGCTGGCCGAAGCATATGGCTTTTGCTGGGGAGTTGAGCGTGCTGTGCAG
ATTGCTTATGAAGCAAGAAAACAGTTTCCCGATGAGAAGATCTGGATTAC
CAGTGAAATCCTTCACAGTCCATCTATCAACAAGCGGTTGGAGGAGATGG
AAGTTAAAATTATACCTGTTGAGGAAGGAAAGAAGCAATTTGATGTGGTA
AATAAGGGTGATGTTGTGGTTTTGCCTGCATTTGGGGCTGCAGTTGAAGA
AATGGTGACTCTGAATGACAAGAATGTACAGATCGTTGATACAACTTGCC
CTTGAGTGTCGAAGGTCTGGACTACTGTTGAGAAGCACAAGAAGGGAGAC
TATACTTCAATTATTCACGGTAAATATTCTCATGAGGAAACTATAGCAAC
TGCATCTTTTGCAGGAAAGTATATCATANTCAAGGATATGAAAGAGGTAT
GTTCGGAAGGTGGATTATATTATATTTTCTGGAGAATCTGTANAAGCATA
TTAGGAGATATTCATTAGAATGTTTTTTTCTTTTCAATTGTTATTATTTA
ATCCAGGCTGAGTACGTGTGTGATTACATTCTGGGGGGTGAACTTTATGG
ATCTACCCTTACAAAAGAAGCCTCCTTGAGGAATTCCAGAAACCCGTTCA
AAAGGGTTGATCCAGATGTTGACCCGGCACAGTT
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