EY728325
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH1_MYCTU (4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1 OS=Mycobacterium tuberculosis GN=ispH1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.425e-12 Identity = 42/143 (29.37%), Postives = 75/143 (52.45%), Query Frame = 1 Query: 97 VKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYI 525 V LAE G+C GV+RAV+ A ++ +++ EI+H+ + L + + ++ + V +G +VV A G A V+ +++N+Q++D TCP V+KV + + DY ++ G HEE + TA A ++ Sbjct: 28 VLLAEPRGYCAGVDRAVETVERALQKH-GPPVYVRHEIVHNRHVVDTLAKAGAVFV------EETEQVPEGAIVVFSAHGVAPTVHVSASERNLQVIDATCPLVTKVHNEARRFARDDYDILLIGHEGHEEVVGTAGEAPDHV 163
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH1_MYCBO (4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1 OS=Mycobacterium bovis GN=ispH1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.425e-12 Identity = 42/143 (29.37%), Postives = 75/143 (52.45%), Query Frame = 1 Query: 97 VKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYI 525 V LAE G+C GV+RAV+ A ++ +++ EI+H+ + L + + ++ + V +G +VV A G A V+ +++N+Q++D TCP V+KV + + DY ++ G HEE + TA A ++ Sbjct: 28 VLLAEPRGYCAGVDRAVETVERALQKH-GPPVYVRHEIVHNRHVVDTLAKAGAVFV------EETEQVPEGAIVVFSAHGVAPTVHVSASERNLQVIDATCPLVTKVHNEARRFARDDYDILLIGHEGHEEVVGTAGEAPDHV 163
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_MYCUA (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Mycobacterium ulcerans (strain Agy99) GN=ispH PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.057e-12 Identity = 42/143 (29.37%), Postives = 72/143 (50.35%), Query Frame = 1 Query: 97 VKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYI 525 V LAE G+C GV+RAV+ A ++ +++ EI+H+ + L + + ++ D V +G +VV A G A ++N+Q +D TCP V+KV + + DY ++ G HEE + TA A +++ Sbjct: 25 VLLAEPRGYCAGVDRAVETVERALEKH-GPPVYVRHEIVHNRHVVDTLAKAGAVFV------EETDQVPEGAIVVFSAHGVAPTVYAAAAERNLQTIDATCPLVTKVHNEARRFARNDYDILLIGHEGHEEVVGTAGEAPEHV 160
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_MYCPA (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Mycobacterium paratuberculosis GN=ispH PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.217e-12 Identity = 42/143 (29.37%), Postives = 71/143 (49.65%), Query Frame = 1 Query: 97 VKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYI 525 V LAE G+C GV+RAV+ A ++ +++ EI+H+ + LE+ + ++ D V +G +VV A G A ++N+ +D TCP V+KV + + DY ++ G HEE + TA A ++ Sbjct: 25 VLLAEPRGYCAGVDRAVETVERALEKH-GPPVYVRHEIVHNRHVVSTLEKAGAVFV------EETDEVPEGAIVVFSAHGVAPTVHAAAAERNLHTIDATCPLVTKVHNEARRFARNDYDILLIGHEGHEEVVGTAGEAPDHV 160
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_KOSOT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=ispH PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11 Identity = 43/144 (29.86%), Postives = 73/144 (50.69%), Query Frame = 1 Query: 97 VKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYII 528 + LAE+ GFC+GV RAV+ K+ D ++ +I+H+ + K+L++M +K+ P + F + V ++ A GA+ + L + +VD TCP V V++ + +K Y +I GK H E A Y+I Sbjct: 3 IVLAESLGFCYGVNRAVEATKRLLKEKRDARV--IGDIVHNEIVMKKLKDMGLKVYP-DLSSIDFSDTAENSVAIIRAHGASPDVEDFLKRRFGYVVDLTCPIVYNVFSLAKDLEKKGYFIVIFGKKDHAEVKALCGRLNDYLI 143
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_CLOPS (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Clostridium perfringens (strain SM101 / Type A) GN=ispH PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11 Identity = 43/133 (32.33%), Postives = 73/133 (54.89%), Query Frame = 1 Query: 97 VKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETI 495 V LA+ GFC+GV+RAV A + +K+F +KI+ ++H+ + LE+ ++ I + + +NKGDVV++ + G + L DK + + + TCP V+ + V+K + Y II G +H E I Sbjct: 5 VILAKNAGFCFGVKRAVDEAIKYQKEF-GKKIYTLGPLIHNNDVVNYLEDNDIFAIELSDTNS----LNKGDVVLIRSHGVKESVIKDLTDKGLIVKNATCPYVTNIQLKVKKCYEQGYKIIIVGDENHPEVI 132
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_CLOP1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=ispH PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11 Identity = 43/133 (32.33%), Postives = 73/133 (54.89%), Query Frame = 1 Query: 97 VKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETI 495 V LA+ GFC+GV+RAV A + +K+F +KI+ ++H+ + LE+ ++ I + + D + KGDVV++ + G + L DK + + + TCP V+ + V+K + Y II G +H E I Sbjct: 5 VILAKNAGFCFGVKRAVDEAIKYQKEF-GKKIYTLGPLIHNNDVVNYLEDNDIFAIELSDA----DSLKKGDVVLIRSHGVKESVIKDLTDKGLIVKNATCPYVTNIQLKVKKCYEQGYKIIIVGDENHPEVI 132
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_ALKOO (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Alkaliphilus oremlandii (strain OhILAs) GN=ispH PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11 Identity = 38/133 (28.57%), Postives = 68/133 (51.13%), Query Frame = 1 Query: 97 VKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETI 495 V +A+ GFC+GVE+A+ A++ + + I+ ++H+ + LEE +K++ K VV++ + G + ++K + +VD TCP V K+ VE+++K Y +I G SH E I Sbjct: 3 VVVADHSGFCFGVEKAIDTAFKELEYKDSKDIYTLGPLIHNQQVISHLEENGIKVVSDLNS-------GKDGVVIIRSHGVPKDVYKDASEKKIDLVDATCPFVRKIQNIVEEYQKKGYHIVIIGDPSHPEVI 128
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_RHOE4 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=ispH PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.502e-11 Identity = 43/147 (29.25%), Postives = 76/147 (51.70%), Query Frame = 1 Query: 97 VKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYIIXKD 537 V LAE G+C GV+RAV+ +A ++ I++ EI+H+ + + LE+ V + + D V +G ++V A G + + ++N++ +D TCP V+KV ++ + DY ++ G HEE TA A ++ D Sbjct: 28 VLLAEPRGYCAGVDRAVETVEKALEKH-GAPIYVRKEIVHNRHVVETLEDQGVIFVD------ETDEVPEGSLLVFSAHGVSPAVHDSAAERNLRTIDATCPLVTKVHQEAKRFARDDYDILLIGHEGHEEVEGTAGEAPDHVTIVD 167
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_NAUPA (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=ispH PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.502e-11 Identity = 45/154 (29.22%), Postives = 77/154 (50.00%), Query Frame = 1 Query: 97 VKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSP-SINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFA--GKYIIXKDMKEV 549 ++ A++YGFC+GV+RAV+IA E++ ++H+P I + + VK + E D+ V++ G +++ L +KNV+I+D TCP V K VE+ K Y +I G +H E S++ + + D KE+ Sbjct: 3 IEKAKSYGFCFGVKRAVEIAEESQNAVT------LGPLIHNPLEIERLAKNYNVKYVETIE-----DIDENVKRVIVRTHGIPKDKLQNLKEKNVEIIDATCPFVKKPQEIVEEMSKQGYDIVIFGDKNHPEIQGVMSYSVHNRVYVVLDPKEL 145 The following BLAST results are available for this feature:
BLAST of EY728325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728325 ID=EY728325; Name=EY728325; organism=Citrus sinensis; type=EST; length=784bpback to top |