EY728325
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_MYCSS (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Mycobacterium sp. (strain MCS) GN=ispH PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.502e-11 Identity = 43/143 (30.07%), Postives = 72/143 (50.35%), Query Frame = 1 Query: 97 VKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYI 525 V LAE G+C GV+RAV+ A ++ +++ EI+H+ + L + + +Q D V +G +VV A G A V +N++ +D TCP V+KV ++ + DY ++ G HEE + TA A ++ Sbjct: 25 VLLAEPRGYCAGVDRAVETVERALEKH-GAPVYVRHEIVHNRYVVDTLAKAGAVFV------EQTDEVPEGAIVVFSAHGVAPTVHVEAAARNLKTIDATCPLVTKVHNEAKRFARDDYDILLVGHEGHEEVVGTAGEAPDHV 160
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_MYCSK (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Mycobacterium sp. (strain KMS) GN=ispH PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.502e-11 Identity = 43/143 (30.07%), Postives = 72/143 (50.35%), Query Frame = 1 Query: 97 VKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYI 525 V LAE G+C GV+RAV+ A ++ +++ EI+H+ + L + + +Q D V +G +VV A G A V +N++ +D TCP V+KV ++ + DY ++ G HEE + TA A ++ Sbjct: 25 VLLAEPRGYCAGVDRAVETVERALEKH-GAPVYVRHEIVHNRYVVDTLAKAGAVFV------EQTDEVPEGAIVVFSAHGVAPTVHVEAAARNLKTIDATCPLVTKVHNEAKRFARDDYDILLVGHEGHEEVVGTAGEAPDHV 160
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_MYCSJ (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Mycobacterium sp. (strain JLS) GN=ispH PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.502e-11 Identity = 43/143 (30.07%), Postives = 72/143 (50.35%), Query Frame = 1 Query: 97 VKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYI 525 V LAE G+C GV+RAV+ A ++ +++ EI+H+ + L + + +Q D V +G +VV A G A V +N++ +D TCP V+KV ++ + DY ++ G HEE + TA A ++ Sbjct: 25 VLLAEPRGYCAGVDRAVETVERALEKH-GAPVYVRHEIVHNRYVVDTLAKAGAVFV------EQTDEVPEGAIVVFSAHGVAPTVHVEAAARNLKTIDATCPLVTKVHNEAKRFARDDYDILLVGHEGHEEVVGTAGEAPDHV 160
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_MYCGI (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Mycobacterium gilvum (strain PYR-GCK) GN=ispH PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.502e-11 Identity = 44/143 (30.77%), Postives = 72/143 (50.35%), Query Frame = 1 Query: 97 VKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYI 525 V LAE G+C GV+RAV+ A ++ I++ EI+H+ + L + + +Q D V +G +VV A G A V +N++ +D TCP V+KV ++ + DY ++ G HEE + TA A ++ Sbjct: 25 VLLAEPRGYCAGVDRAVETVERALEKH-GAPIYVRHEIVHNRYVVDTLAKAGAIFV------EQTDEVPEGAIVVFSAHGVAPTVHVEAAARNLKTIDATCPLVTKVHNEAKRFARDDYDILLVGHEGHEEVVGTAGEAPDHV 160
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_CLOPE (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Clostridium perfringens GN=ispH PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.502e-11 Identity = 43/133 (32.33%), Postives = 72/133 (54.14%), Query Frame = 1 Query: 97 VKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETI 495 V LA+ GFC+GV+RAV A + +K+F +KI+ ++H+ + LE+ + I + + D + KGDVV++ + G + L DK + + + TCP V+ + V+K + Y II G +H E I Sbjct: 5 VILAKNAGFCFGVKRAVDEAIKYQKEF-GKKIYTLGPLIHNNDVVNYLEDNNIFAIELSDA----DSLKKGDVVLIRSHGVKESVIKDLTDKGLIVKNATCPYVTNIQLKVKKCYEQGYKIIIVGDKNHPEVI 132
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_HELPY (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Helicobacter pylori GN=ispH PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.574e-11 Identity = 46/140 (32.86%), Postives = 71/140 (50.71%), Query Frame = 1 Query: 97 VKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEE-MEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFA 513 +K+A+ YGFC+GV+RA+QIA + + I ++H+ RLE+ VKI EE K+ + K V++ G +++ L +K V+I D TCP V K VE K Y ++ G +H E S+A Sbjct: 3 IKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNFNVKI---EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYA 130
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_HELPS (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Helicobacter pylori (strain Shi470) GN=ispH PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.574e-11 Identity = 46/140 (32.86%), Postives = 71/140 (50.71%), Query Frame = 1 Query: 97 VKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEE-MEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFA 513 +K+A+ YGFC+GV+RA+QIA + + I ++H+ RLE+ VKI EE K+ + K V++ G +++ L +K V+I D TCP V K VE K Y ++ G +H E S+A Sbjct: 3 IKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNFNVKI---EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYA 130
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_HELPJ (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Helicobacter pylori J99 GN=ispH PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.574e-11 Identity = 46/140 (32.86%), Postives = 71/140 (50.71%), Query Frame = 1 Query: 97 VKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEE-MEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFA 513 +K+A+ YGFC+GV+RA+QIA + + I ++H+ RLE+ VKI EE K+ + K V++ G +++ L +K V+I D TCP V K VE K Y ++ G +H E S+A Sbjct: 3 IKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNFNVKI---EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYA 130
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_HELPH (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Helicobacter pylori (strain HPAG1) GN=ispH PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.574e-11 Identity = 46/140 (32.86%), Postives = 71/140 (50.71%), Query Frame = 1 Query: 97 VKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEE-MEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFA 513 +K+A+ YGFC+GV+RA+QIA + + I ++H+ RLE+ VKI EE K+ + K V++ G +++ L +K V+I D TCP V K VE K Y ++ G +H E S+A Sbjct: 3 IKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNFNVKI---EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYA 130
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_HELP2 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Helicobacter pylori (strain P12) GN=ispH PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.574e-11 Identity = 46/140 (32.86%), Postives = 71/140 (50.71%), Query Frame = 1 Query: 97 VKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEE-MEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFA 513 +K+A+ YGFC+GV+RA+QIA + + I ++H+ RLE+ VKI EE K+ + K V++ G +++ L +K V+I D TCP V K VE K Y ++ G +H E S+A Sbjct: 3 IKMAKDYGFCFGVKRAIQIAEKNQNSL------IFGSLIHNAKEINRLEKNFNVKI---EEDPKK---IPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYA 130 The following BLAST results are available for this feature:
BLAST of EY728325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728325 ID=EY728325; Name=EY728325; organism=Citrus sinensis; type=EST; length=784bpback to top |