EY728316

Overview
NameEY728316
Unique NameEY728316
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728316 vs. ExPASy Swiss-Prot
Match: THI4_UROFA (Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.883e-35
Identity = 72/125 (57.60%), Postives = 95/125 (76.00%), Query Frame = 1
Query:   16 MTRRYMTDMITYADTDXXXXGAGSAGLSCAYEL-SKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPQRQLFNAVAAEDLIVK 387
            M RRY  DM   A +D    GAGSAGLSCAY L +  P+++I I+E +V+PGGG WL GQL SAMV RKPA  FLD++G+ Y+++ ++VV+KHAALFTST++SK+LA P  ++FNA A EDLI+K
Sbjct:   67 MVRRYFQDMEERAISDVIIVGAGSAGLSCAYALGTARPDLKITILESNVAPGGGCWLGGQLMSAMVCRKPADEFLDQVGVPYEDEGNFVVVKHAALFTSTVLSKVLAMPNVKMFNATACEDLIIK 191          
BLAST of EY728316 vs. ExPASy Swiss-Prot
Match: THI4_PYRKO (Putative thiazole biosynthetic enzyme OS=Pyrococcus kodakaraensis GN=TK0434 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.875e-13
Identity = 43/130 (33.08%), Postives = 69/130 (53.08%), Query Frame = 1
Query:    7 SGEMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPQRQLFNAVAAEDLIVKGGR 396
            S  +   Y  D++     D    GAG +G+   Y L+K    ++AI E+ +S GGG W     F+ +VV++ A   LDE G+DY +  + + +  +    ST+ SK + +   ++FN V  EDL+VK GR
Sbjct:    7 SRAIVEAYFNDLLQNLQLDIAIVGAGPSGMVAGYYLAKG-GAKVAIFEKKLSVGGGIWGGAMGFNRVVVQESAREILDEFGVDYSQVGNGLYVLDSIELASTLASKAV-KAGAKIFNMVEVEDLVVKDGR 134          
BLAST of EY728316 vs. ExPASy Swiss-Prot
Match: THI4_THEMA (Putative thiazole biosynthetic enzyme OS=Thermotoga maritima GN=TM_0787 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.449e-13
Identity = 41/127 (32.28%), Postives = 73/127 (57.48%), Query Frame = 1
Query:   16 MTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPQRQLFNAVAAEDLIVKGGR 396
            +  RY   +    + D    GAG +GL+ AYEL+KN   ++A+ E+  +PGGG W  G +F+ +V+ K    FL E+ I+Y+ ++ ++V+  +  F S ++ +   +    +FN V+ ED+ V+ GR
Sbjct:   12 IVERYFEKLRNSLELDVAIVGAGPSGLTAAYELAKN-GFRVAVFEERNTPGGGIWGGGMMFNEIVLEKELENFLKEVEIEYEVKEDHIVV-DSVHFASGLLYR-ATKAGAIVFNNVSVEDVAVQNGR 135          
BLAST of EY728316 vs. ExPASy Swiss-Prot
Match: THI4_PYRHO (Putative thiazole biosynthetic enzyme OS=Pyrococcus horikoshii GN=PH1357 PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.199e-13
Identity = 43/123 (34.96%), Postives = 68/123 (55.28%), Query Frame = 1
Query:   28 YMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPQRQLFNAVAAEDLIVKGGR 396
            Y  D++   + D    GAG +G+  AY L+K    ++AI E+ +S GGG W  G  F+ +VV+  A   LDE GI Y+E +    +  A    +TI SK++ +   ++FN +  EDL++K  R
Sbjct:   15 YYRDLLNNLELDVAIVGAGPSGMVAAYYLAKG-GAKVAIFEKKLSIGGGIWGGGMGFNKVVVQDEAREILDEFGIRYEEFEKGYYVADAIEVATTIASKVV-KSGVKIFNMIEVEDLVIKDNR 135          
BLAST of EY728316 vs. ExPASy Swiss-Prot
Match: THI4_PYRAB (Putative thiazole biosynthetic enzyme OS=Pyrococcus abyssi GN=PYRAB07910 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.588e-12
Identity = 43/123 (34.96%), Postives = 67/123 (54.47%), Query Frame = 1
Query:   28 YMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPQRQLFNAVAAEDLIVKGGR 396
            Y  D++   + D    GAG +G+  AY L+K    ++AI E+ +S GGG W  G  F+ +VV++ A   LDE  I Y+E +    +  A    +TI SK + +   ++FN +  EDL+VK  R
Sbjct:   15 YYRDLLNNLELDVAIVGAGPSGMVAAYYLAKG-GAKVAIFEKKLSIGGGIWGGGMGFNKVVVQEEAREILDEFDIRYEEFEKGYYVADAIEVATTIASKTV-KAGVKIFNMIEVEDLVVKDNR 135          
BLAST of EY728316 vs. ExPASy Swiss-Prot
Match: THI4_PYRFU (Putative thiazole biosynthetic enzyme OS=Pyrococcus furiosus GN=PF1530 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.537e-12
Identity = 44/130 (33.85%), Postives = 68/130 (52.31%), Query Frame = 1
Query:    7 SGEMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPQRQLFNAVAAEDLIVKGGR 396
            S  +   Y  D++   + D    GAG +G+   Y L+K    ++AI E+ +S GGG W  G  F+ +VV++ A   LDE  I Y+E +    +  A    +TI SK + +   ++FN V  EDL+VK  R
Sbjct:    8 SRAIVESYFKDLLNNLELDVAIVGAGPSGMVAGYYLAKG-GAKVAIFEKKLSIGGGIWGGGMGFNKIVVQEEAKEILDEFDIRYEEFEKGYYVADAIEVATTIASKTV-KAGVKIFNMVEVEDLVVKDDR 135          
BLAST of EY728316 vs. ExPASy Swiss-Prot
Match: THI4_METTH (Putative thiazole biosynthetic enzyme OS=Methanobacterium thermoautotrophicum GN=MTH_1620 PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.994e-11
Identity = 36/120 (30.00%), Postives = 67/120 (55.83%), Query Frame = 1
Query:   28 YMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPQRQLFNAVAAEDLIVK 387
            YM D++ Y + D    G G +GL+  Y L++   +++A+ E+ +S GGG W  G +F+ +VV+      LDE GI  +  D    +  +   TST+ S+   +   ++FN ++ ED++++
Sbjct:   16 YMEDLLDYMEMDVAIGGGGPSGLTAGYYLAR-AGLKVALFERKLSIGGGMWGGGMMFNKIVVQDEGREILDEFGIRSEPYDEGYHVADSVEATSTLCSR-ACQAGLKIFNLMSIEDVMIR 133          
The following BLAST results are available for this feature:
BLAST of EY728316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
THI4_UROFA3.883e-3557.60Thiazole biosynthetic enzyme, mitochondrial OS=Uro... [more]
THI4_PYRKO1.875e-1333.08Putative thiazole biosynthetic enzyme OS=Pyrococcu... [more]
THI4_THEMA2.449e-1332.28Putative thiazole biosynthetic enzyme OS=Thermotog... [more]
THI4_PYRHO3.199e-1334.96Putative thiazole biosynthetic enzyme OS=Pyrococcu... [more]
THI4_PYRAB1.588e-1234.96Putative thiazole biosynthetic enzyme OS=Pyrococcu... [more]
THI4_PYRFU3.537e-1233.85Putative thiazole biosynthetic enzyme OS=Pyrococcu... [more]
THI4_METTH2.994e-1130.00Putative thiazole biosynthetic enzyme OS=Methanoba... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-B12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728316 ID=EY728316; Name=EY728316; organism=Citrus sinensis; type=EST; length=836bp
CACGCGTCCGGTGAAATGACGCGCAGGTACATGACGGACATGATCACTTA
TGCTGACACTGATGTGGTAGTGGTTGGTGCTGGCTCTGCTGGCCTCTCTT
GTGCTTATGAGCTCAGCAAAAACCCCAACATTCAGATTGCTATTATCGAA
CAGTCTGTTAGCCCCGGCGGTGGCGCGTGGCTCAGTGGACAGCTCTTCTC
TGCCATGGTTGTGCGCAAACCAGCCCACATCTTCCTTGACGAGCTTGGCA
TCGACTACGATGAGCAAGACAGCTATGTTGTGATCAAGCATGCAGCGCTG
TTCACCTCCACTATAATGAGCAAGCTCCTGGCCCGCCCCCAACGTCAGCT
CTTTAATGCAGTGGCAGCCGAAGACTTGATAGTCAAAGGCGGCAGAGTTG
GTGGTGTGGTGGACAACTGGGCCGTGGTGGTCATGAATCAACAACACAGT
CTTGCATGGATTCCCATGTAATTGAAAGCAAAGGTGGTGTTAACCCTGTT
GGCATGATTGGGCTTTGGGGGCCCGGGAATAAAAAGTTGAAAATATTGGA
TGATTGAGGAATGCTTGAAATAAGGACCGGACATAAATCCTCCAAAAAGC
TATTGTTAGGGGACCAGGAGGGTGGCCTGGTTTAATATTACCGCATTGAA
ATTCCCAAATTAATTTGTCCTTAAAGGGGGGCAATTTGGGACAATAATAA
TTCGGGGGCAAAGGGGCCGCATTGGGGTTAAATCCGGGGCCCCCCAAGTC
ATAAAGGGAATATTTTGGGAGTGTCCCCTGAGCTAGCTTACCTGGCCGAT
TTGCCGAAAAGGTGAAGGTAATTGAAAAAACAGGTC
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