EY728304
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSA6_CAEEL (Proteasome subunit alpha type-6 OS=Caenorhabditis elegans GN=pas-1 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.546e-30 Identity = 79/249 (31.73%), Postives = 124/249 (49.80%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW*VFISF*VEF*FACLVFDIFCKLLTEHCLFPYSFFVTLLLKFWLNVAVLLSEKQLC*FPFMYRIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFRCDPAGHFFGHKATSAGLKEQEAIYFLEKKMKNDPAFTFQETVQTGISTLHQS 759 GR++QVEYAFKA+ + +T++ V+G D+ + QK+VPD L+ +VT ++ I++ +G A GMI DA+ +++A+ EAA +++K GY D+ C+LL + ++AD +Q YTQ+A MR LG + +S D+E GP ++R DPAG++ G K S G+K+ A FLEKK+K T E ++ I L S Sbjct: 20 GRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGY---------------------------DMPCELLAK------------------------------------KMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTSTEAIELAIEALQTS 205
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSA6_SCHPO (Probable proteasome subunit alpha type-6 OS=Schizosaccharomyces pombe GN=SPBC646.16 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 9.674e-30 Identity = 63/97 (64.95%), Postives = 77/97 (79.38%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAK 303 GRL+QVEYAFKA AG+TS+GV GK+ CV++QKKVPDKL+D ++V H+FPITK +G + TG IADAR V +AR EAAEF +K GY MP DVLAK Sbjct: 18 GRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVKHVFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAK 114 HSP 2 Score: 87.0409 bits (214), Expect = 1.602e-16 Identity = 48/118 (40.68%), Postives = 70/118 (59.32%), Query Frame = 1 Query: 493 RIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFRCDPAGHFFGHKATSAGLKEQEAIYFLEKKMKNDP-AFTFQETVQTGISTLHQSCKRILGRMKLRLAW*PRKSKFKIWSTRK 843 R+A+ +QV TQ A MRPLGV ++++D+E GP LF+ DPAG + G+KATSAG K+ E I +LEK+ K D +TV+TGI L S +L++ F++ S + Sbjct: 115 RMANIAQVSTQRAAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFKKDGIPSNLTDTVETGIQALMSSLSTDFKSTELQIGVVEDDKPFRVLSVEE 232
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSA6_YEAST (Proteasome component C7-alpha OS=Saccharomyces cerevisiae GN=SCL1 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.913e-26 Identity = 56/97 (57.73%), Postives = 74/97 (76.29%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAK 303 GRL+QVEYAFKA + S+ VRGKD V++QKKVPDKLLD T+V+++F I++ +G++ G I DAR +A+ EAAEFR+KYGY+MP DVLAK Sbjct: 23 GRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVSYIFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAK 119 HSP 2 Score: 80.4925 bits (197), Expect = 1.499e-14 Identity = 36/68 (52.94%), Postives = 50/68 (73.53%), Query Frame = 1 Query: 493 RIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFRCDPAGHFFGHKATSAGLKEQEAIYFLEKKMK 696 R+A+ SQ+YTQ AYMRPLGV+ +S+DEE GP +++ DPAG++ G+KAT+ G K+QE LE K Sbjct: 120 RMANLSQIYTQRAYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFK 187
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSA6_DICDI (Proteasome subunit alpha type-6 OS=Dictyostelium discoideum GN=psmA6 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.466e-25 Identity = 51/98 (52.04%), Postives = 75/98 (76.53%), Query Frame = 1 Query: 10 RGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAK 303 +G+L+Q+EYAFKA+K G+TS+G+RGKD V V TQKK+PDKL+D SVT L+ +T Y+G + TG++ D+++ +A E A F K+GY++P +VLAK Sbjct: 18 QGKLYQIEYAFKAIKTGGLTSVGIRGKDCVVVATQKKIPDKLIDPKSVTSLYKLTDYIGCVQTGIVPDSKSQASRAIQECATFHHKFGYQIPPNVLAK 115 HSP 2 Score: 95.1301 bits (235), Expect = 6.041e-20 Identity = 45/83 (54.22%), Postives = 62/83 (74.70%), Query Frame = 1 Query: 493 RIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFRCDPAGHFFGHKATSAGLKEQEAIYFLEKKMKNDPAFTFQETVQTGI 741 R+AD +Q+ TQHA RPLGV +++ ID+E GP+LF+ DPAG F G+KAT+AG KEQE+ FLEKK K++P + ET+Q + Sbjct: 116 RMADIAQLSTQHASARPLGVAMILIGIDDELGPQLFKVDPAGVFTGYKATAAGEKEQESTNFLEKKFKSNPQLSKDETIQVSL 198 HSP 3 Score: 21.557 bits (44), Expect = 6.041e-20 Identity = 7/18 (38.89%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 753 SVLQEDFRANEIEVGVVT 806 SVL D +++++E+G+ T Sbjct: 208 SVLGADLKSSDLEIGICT 225
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSA1_TRYBB (Proteasome subunit alpha type-1 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.883e-19 Identity = 47/97 (48.45%), Postives = 66/97 (68.04%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAK 303 G L+QVEYAFKAV AG+ ++ +R KD+V V TQ VPDKL+ ++T L+ + G+ TG D + LVQ+AR EA+E++++YG M V VLAK Sbjct: 17 GSLYQVEYAFKAVTYAGLLTVAIRCKDAVLVFTQHSVPDKLMRPETITSLYNVNDNTGVCITGRAPDGKALVQKARNEASEYKYRYGMPMLVSVLAK 113
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSA5_ORYSJ (Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica GN=PAE1 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 6.088e-16 Identity = 44/93 (47.31%), Postives = 62/93 (66.67%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVD 291 GRLFQVEYA +A+K G T+IG++ KD V + +K+V LL+ +SV + I +++G +G+IADARTLV+ AR E RF YG M V+ Sbjct: 19 GRLFQVEYAIEAIKL-GSTAIGLKTKDGVVLAVEKRVTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVE 110
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSMA_METKA (Proteasome subunit alpha OS=Methanopyrus kandleri GN=psmA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.038e-15 Identity = 42/97 (43.30%), Postives = 65/97 (67.01%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAK 303 GRLFQVEYA +AVK G T++G++ ++ V + K+V KL++ S+ ++ I ++G G++ADAR LV++AR EA +R+ YG + VDVL K Sbjct: 21 GRLFQVEYAREAVKR-GTTALGIKVEEGVVLGVDKRVTSKLIEPESIEKVYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVK 116
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSMA_THESM (Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=psmA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.356e-15 Identity = 44/97 (45.36%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAK 303 GRLFQV+YA +AVK G T++GV+ KD V + +K+V KL++ S +F I ++ ++G+IADAR LV +AR EA +R YG +P+ VL K Sbjct: 21 GRLFQVQYAREAVKR-GATAVGVKCKDGVVLAVEKRVTSKLIEPESYEKIFQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVK 116
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSA5_TRYBB (Proteasome subunit alpha type-5 OS=Trypanosoma brucei brucei PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.356e-15 Identity = 42/96 (43.75%), Postives = 62/96 (64.58%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLA 300 GR+FQ+EYA +A+K G TS+G++ D+V + +K+VP L+D +SV + I ++G + +GM+ADAR LV AR EA RF Y M V+ A Sbjct: 19 GRIFQIEYAIEAIKL-GSTSLGIQTPDAVIIAAEKRVPSTLVDPSSVNKILEIDHHIGTVLSGMVADARILVDHARVEAQNHRFTYDEPMSVESCA 113
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSA5B_ARATH (Proteasome subunit alpha type-5-B OS=Arabidopsis thaliana GN=PAE2 PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.771e-15 Identity = 43/93 (46.24%), Postives = 61/93 (65.59%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVD 291 GRLFQVEYA +A+K G T+IGV+ K+ V + +K++ LL+ +SV + I ++G +G+IADARTLV+ AR E RF YG M V+ Sbjct: 19 GRLFQVEYAIEAIKL-GSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVE 110 The following BLAST results are available for this feature:
BLAST of EY728304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728304 ID=EY728304; Name=EY728304; organism=Citrus sinensis; type=EST; length=916bpback to top |