EY728304
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSA5A_ARATH (Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana GN=PAE1 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.771e-15 Identity = 43/93 (46.24%), Postives = 61/93 (65.59%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVD 291 GRLFQVEYA +A+K G T+IGV+ K+ V + +K++ LL+ +SV + I ++G +G+IADARTLV+ AR E RF YG M V+ Sbjct: 19 GRLFQVEYAIEAIKL-GSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVE 110
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSA5_SOYBN (Proteasome subunit alpha type-5 OS=Glycine max GN=PAE1 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.313e-15 Identity = 42/93 (45.16%), Postives = 62/93 (66.67%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVD 291 GRLFQVEYA +A+K G T+IG++ K+ V + +K++ LL+ +SV + I +++G +G+IADARTLV+ AR E RF YG M V+ Sbjct: 19 GRLFQVEYAIEAIKL-GSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVE 110
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSMA_THEK1 (Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.946e-15 Identity = 43/97 (44.33%), Postives = 63/97 (64.95%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAK 303 GRLFQV YA +AVK G T++GV+ KD V + +K++ KL++ +S +F I ++ +G+IADAR LV +AR EA +R YG +P+ VL K Sbjct: 21 GRLFQVNYAREAVKR-GATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVK 116
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSMA_PYRKO (Proteasome subunit alpha OS=Pyrococcus kodakaraensis GN=psmA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.946e-15 Identity = 43/97 (44.33%), Postives = 63/97 (64.95%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAK 303 GRLFQV YA +AVK G T++GV+ KD V + +K++ KL++ +S +F I ++ +G+IADAR LV +AR EA +R YG +P+ VL K Sbjct: 21 GRLFQVNYAREAVKR-GATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVK 116
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSMA_THEON (Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1) GN=psmA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 5.154e-15 Identity = 42/97 (43.30%), Postives = 63/97 (64.95%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAK 303 GRLFQV YA +AVK G T++GV+ K+ V + +K++ KL++ +S +F I ++ +G+IADAR LV +AR EA +R YG +P+ VL K Sbjct: 21 GRLFQVNYAREAVKR-GATAVGVKWKEGVVLAVEKRITSKLIEPSSYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVK 116
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSMA_METB6 (Proteasome subunit alpha OS=Methanoregula boonei (strain 6A8) GN=psmA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.731e-15 Identity = 40/97 (41.24%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAK 303 GRL+QVEYA +AVK G T++G++ D V ++ K+V KLL+ +S+ +F I +++G+ ++G++ DAR LV +AR E R Y + V+ LAK Sbjct: 20 GRLYQVEYAREAVKR-GTTAVGIKAHDGVVLIVDKRVSSKLLESSSIEKIFKIDEHIGVASSGLVGDARALVDRARIECQINRVSYDERIEVEALAK 115
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSMA_METTH (Proteasome subunit alpha OS=Methanobacterium thermoautotrophicum GN=psmA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.499e-14 Identity = 41/97 (42.27%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAK 303 GRLFQVEYA +AVK G TS+GV+ K+ + +V K+ KL++ S+ +F I +++G +G++ADAR ++++AR EA R Y + V+ LAK Sbjct: 20 GRLFQVEYAREAVKR-GTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIEKIFQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAK 115
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSA3_RAT (Proteasome subunit alpha type-3 OS=Rattus norvegicus GN=Psma3 PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 1.499e-14 Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLA 300 GR+FQVEYA KAV+ + T+IG+R KD V +K V KL + S LF + +++G+ G++ADAR+L AR EA+ FR +GY +P+ LA Sbjct: 19 GRVFQVEYAMKAVENSS-TAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLA 113
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSA3_MOUSE (Proteasome subunit alpha type-3 OS=Mus musculus GN=Psma3 PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 1.499e-14 Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLA 300 GR+FQVEYA KAV+ + T+IG+R KD V +K V KL + S LF + +++G+ G++ADAR+L AR EA+ FR +GY +P+ LA Sbjct: 19 GRVFQVEYAMKAVENSS-TAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLA 113
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSA3_HUMAN (Proteasome subunit alpha type-3 OS=Homo sapiens GN=PSMA3 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.499e-14 Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLA 300 GR+FQVEYA KAV+ + T+IG+R KD V +K V KL + S LF + +++G+ G++ADAR+L AR EA+ FR +GY +P+ LA Sbjct: 19 GRVFQVEYAMKAVENSS-TAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLA 113 The following BLAST results are available for this feature:
BLAST of EY728304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728304 ID=EY728304; Name=EY728304; organism=Citrus sinensis; type=EST; length=916bpback to top |