EY728302

Overview
NameEY728302
Unique NameEY728302
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728302 vs. ExPASy Swiss-Prot
Match: ATX4_ARATH (Histone-lysine N-methyltransferase ATX4 OS=Arabidopsis thaliana GN=ATX4 PE=2 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 2.499e-13
Identity = 39/138 (28.26%), Postives = 64/138 (46.38%), Query Frame = 3
Query:  408 YRPVRVDWKDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLXXXXXXXXXXXXXXXXVVGGAMKPY-TDGRWAHLACAIWIPETCLTDVKRMEPIDGLNRVSKDLWKLLCNICGVSYGAAS 818
            Y PV   W   ++C+VC   E++  N  + C++C++ VH  CYG     +   W+C                  V GGA+KP   +  W H+ CA + PE C    ++MEP  G+  +    +  +C IC   +G+ +
Sbjct:  583 YEPVNAKWTT-ERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARHVRDFTSWVCK--ACERPDIKRECCLCPVKGGALKPTDVETLWVHVTCAWFQPEVCFASEEKMEPAVGILSIPSTNFVKICVICKQIHGSCT 717          
BLAST of EY728302 vs. ExPASy Swiss-Prot
Match: NTO1_YEAST (NuA3 HAT complex component NTO1 OS=Saccharomyces cerevisiae GN=NTO1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.263e-13
Identity = 42/122 (34.43%), Postives = 54/122 (44.26%), Query Frame = 3
Query:  447 CSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLXXXXXXXXXXXXXXXXVVGGAMKPYTDGRWAHLACAIWIPETCLTDVKRMEPIDGLNRVSKDLWKLLCNICGVSYGA 812
            C+VC   +    N  + CD C + VH  CYG +    G  WLC                    G A K    G W H  CA+W+PE   +++  MEPI+G+  VS   WKL C IC    GA
Sbjct:  266 CAVCLGTDSDNLNTIVFCDGCDIAVHQECYGIIFIPEGK-WLCRRCMISKNNFATCLMCPSHTG-AFKQTDTGSWVHNICALWLPELYFSNLHYMEPIEGVQNVSVSRWKLNCYICKKKMGA 385          
BLAST of EY728302 vs. ExPASy Swiss-Prot
Match: YBE4_SCHPO (PHD finger protein C17D11.04c OS=Schizosaccharomyces pombe GN=SPBC17D11.04c PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.115e-12
Identity = 42/132 (31.82%), Postives = 58/132 (43.94%), Query Frame = 3
Query:  414 PVRVDWKDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLXXXXXXXXXXXXXXXXVVGGAMKPYTDGRWAHLACAIWIPETCLTDVKRMEPIDGLNRVSKDLWKLLCNICGVSYG 809
            PVRV+ +   +C +C+  E   +N  + CD C   VH  CYG +  V    W C                     GA     DGRW H  CAI IPE    D  R++ +  +  + K  WKL+C IC + +G
Sbjct:  186 PVRVEDELDGRCVICNEAECENSNAIVFCDNCNTSVHQNCYG-IPFVPEGQWFCKKCLLAPHEVICCAFCPDR-DGAFCTTLDGRWCHTICAIAIPEISFHDTSRLDLVRNIASIPKSRWKLVCCICKLRWG 315          
The following BLAST results are available for this feature:
BLAST of EY728302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
ATX4_ARATH2.499e-1328.26Histone-lysine N-methyltransferase ATX4 OS=Arabido... [more]
NTO1_YEAST3.263e-1334.43NuA3 HAT complex component NTO1 OS=Saccharomyces c... [more]
YBE4_SCHPO2.115e-1231.82PHD finger protein C17D11.04c OS=Schizosaccharomyc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-A08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728302 ID=EY728302; Name=EY728302; organism=Citrus sinensis; type=EST; length=852bp
CCACGCGTCCGATCTGGCCTGAAGGATATACAGCCGTTAGGAAGTTCACT
TCATTAGCAGATCCACGTGTTTGTAACTCTTACAAGATGGAAGTGTTGAG
GGATACTGAGTCAAAGATTCGACCTCTGTTTAGAGTCACGTTGGATAATG
GAGAGCAGTTCACTGGATCTACTCCATCTACTTGCTGGAGTAAGATATGC
ATGAAAATAAGGGAGGGACAAAATAATACTTCTGATGATTTCAGTGCTGA
AGGTGCCGCAGAGAAAATCTCTGAGTCTGGTTCTGACATGTTTGGTTTCT
CCAATCCTGAAGTGATGAAACTTATACTGGGGTTAACAAAATCCAGACCT
ACTTCAAAATCCTCTTTGTGCAAATTAACCTCGAAATATCGAGATCTCCC
TGGTGGCTATAGACCTGTTCGTGTTGACTGGAAAGACCTTGATAAGTGCA
GTGTCTGCCACATGGATGAGGAGTATCAAAACAATCTATTCCTGCAATGT
GATAAATGCAGAATGATGGTTCATGCTAGATGCTATGGGGAGTTAGAACC
TGTTAATGGTGTGCTATGGCTATGCAACTTATGTCGCCCAGGAGCTCCTG
AACCTCCCCCTCCTTGCTGCCTTTGTCCTGTTGTAGGGGGTGCGATGAAA
CCCTACACTGATGGACGCTGGGCTCATTTAGCTTGTGCCATATGGATACC
TGAAACTTGCTTAACTGATGTCAAGAGAATGGAACCCATAGACGGGCTAA
ACAGAGTCAGTAAGGATCTTTGGAAGCTGTTATGTAACATTTGTGGCGTA
TCTTATGGTGCTGCATCCCATGTCCAACCCTACTTGTCGGGTGGCTTTCC
TC
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