EY728236
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: ABCF4_DICDI (ABC transporter F family member 4 OS=Dictyostelium discoideum GN=abcF4 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.334e-20 Identity = 62/193 (32.12%), Postives = 103/193 (53.37%), Query Frame = 3 Query: 27 VVTIKNLEFGYEDR-LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMG-LEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFVKQIVIE*WRLK 599 ++ K++ FGYE R +F + ++ I+ K A++G NG GKSTL+KL+ G L + G + + F Q+ + LD T +E + + I+ LGR + K++ LSGG+K+R+ + +L+LDEPTNHLDI E L E I+ + G V+ +SH+++ + I + W +K Sbjct: 922 LLVFKDVCFGYEGRPTMFKKLDIGIDMDSKIALVGMNGVGKSTLMKLMNGDLHETTG--YIERSRKMRVARFSQHFVDQLDTTMTPIEYFQSKFNNPPVQQIRNHLGRFGICNSLPLHKITTLSGGQKSRVILAELAWAEPHILLLDEPTNHLDIDAIEALAEGINAFTGGVVLISHNQHLINLIAEQIWVVK 1112
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: YBP8_SCHPO (Uncharacterized ABC transporter ATP-binding protein C16H5.08c OS=Schizosaccharomyces pombe GN=SPBC16H5.08c PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.880e-20 Identity = 63/198 (31.82%), Postives = 101/198 (51.01%), Query Frame = 3 Query: 27 VVTIKNLEFGYE---DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAE----DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFVKQIVIE*WRLK 599 ++ ++ F Y+ D L+ + I+ + AI+G NG GKSTLL LI GL P G V + Y Q+ A+ L DK+ LE + + + + + + +LG+ ++ LS G K+R+ F ++ +L+LDEPTNHLDI + L +AI+ + G V+ VSHD + Q+ E W +K Sbjct: 387 IIAFNDVAFSYDGNLDHALYRDLSFGIDMDSRVAIVGKNGTGKSTLLNLITGLLIPIEGNVSRYSGLKMAKY-SQHSADQLPYDKSPLEYIMDTYKPKFPERELQQWRSVLGKFGLSGLHQTSEIRTLSDGLKSRVVFAALALEQPHILLLDEPTNHLDITSIDALAKAINVWTGGVVLVSHDFRLIGQVSKELWEVK 583
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: YB89_SCHPO (Uncharacterized ABC transporter ATP-binding protein C29A3.09c OS=Schizosaccharomyces pombe GN=SPBC29A3.09c PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.618e-20 Identity = 55/175 (31.43%), Postives = 94/175 (53.71%), Query Frame = 3 Query: 72 LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP-NYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFVKQIVIE*WR 593 + ++ ++ + ++GPNG GKST+LKL++ P G ++ H L YF Q+ + LDL+ L +A+ ++ + LG + +K+ LSGG+K+R+AF ++ +L+LDEPTNHLD+ + L A+ ++G VI VSHD F+ + W+ Sbjct: 533 ILKHVDIDVQMDSRIGVVGPNGAGKSTMLKLLIEQLHPTSG--IVSRHPRLRIAYFAQHHVDTLDLNLNALSFLAKTFPGKGEEEYRRHLGAFGVSGPLALQKMITLSGGQKSRVAFACLGLQNPHILILDEPTNHLDMESMDALTRAVKRFQGGVILVSHDVDFLDKTCTSIWQ 705
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: AB4F_ARATH (ABC transporter F family member 4 OS=Arabidopsis thaliana GN=ABCF4 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.926e-19 Identity = 59/186 (31.72%), Postives = 99/186 (53.23%), Query Frame = 3 Query: 45 LEFGYEDRLLFNRANLT--IERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDW----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFVKQIVIE 584 + F Y +R F +N+ I+ G + AI+GPNG GKSTLL L+ G P GE+ + + Y Q+ + L + +T ++ + D + + ++ LG+ + ++ LSGG+KAR+ F + +L+LDEPTNHLD+ + L +A+ E+ G V+ VSHD + ++ E Sbjct: 501 VSFSYPNRPDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTEGEMRRSQKLRIGRY-SQHFVDLLTMGETPVQYLLRLHPDQEGFSKQEAVRAKLGKFGLPSHNHLSPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCAE 685
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: ZNUC_RICBR (Zinc import ATP-binding protein znuC OS=Rickettsia bellii (strain RML369-C) GN=znuC PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.354e-17 Identity = 53/186 (28.49%), Postives = 101/186 (54.30%), Query Frame = 3 Query: 21 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKG----TVITVSHDRYFV 566 + ++ N+ + ++L N + T+++ T +IGPNG GK+T+++L++GLEKP GE+++ + + Y Q + DL TV + + A + +DIK + + + + D+K+S LSGG+ ++ ++ L++LDEP LD+ ++ + IS + TV +SHD + V Sbjct: 3 KPIIEFHNVSKKFGNKLPINNVSFTVKKNNITTLIGPNGAGKTTIVRLMLGLEKPTSGEIII-DPRLKIGYVPQKFNLSSDLPITVKKFLDLLAPNNLTNDIKEIHSFIDLER-LKDQKISTLSGGQFQKIVLASSLLSKPDLIILDEPLQSLDVTSQQEFYQLISLIRKKLDITVFMISHDLFTV 186
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: ZNUC_MARAV (Zinc import ATP-binding protein znuC OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=znuC PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.354e-17 Identity = 59/186 (31.72%), Postives = 96/186 (51.61%), Query Frame = 3 Query: 27 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAE--AAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGT----VITVSHDRYFV 566 +V ++ + ++DR + +R NLT+ RG+ IIGPNG GK+TL+K ++G+++ G++ +V P + L L+ T+ +V + D L R A +LD V LSGGEK RL + + + LLVLDEP +DI + L + I + + +I +SHD + V Sbjct: 5 LVRLEQITVAFDDRPVVDRVNLTVSRGDIVTIIGPNGAGKTTLIKTVLGIQRATSGQL-----SVAPGLVIGYVPQHLTLEPTLPLSVRRFMLLSGRTLADCTAALERTGV-AHLLDASVHHLSGGEKQRLLLARALARKPDLLVLDEPAQGVDINGQATLYDLIRQLRDELHCGIIMISHDLHLV 184
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: POTA_MANSM (Spermidine/putrescine import ATP-binding protein potA OS=Mannheimia succiniciproducens (strain MBEL55E) GN=potA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.074e-17 Identity = 59/197 (29.95%), Postives = 104/197 (52.79%), Query Frame = 3 Query: 21 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLL---------GEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRI--DDIKGLL---GRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKG----TVITVSHDR 557 + ++ +++L+ Y + + + NLTI GE I+GP+GCGK+T+L+LI G E+ GG+++L EH + F Q+ AL T+ E VA ++ ++IK + R +M DRK + LSGG++ R+A + +V +L+LDE + LD ++ ++ + + T I V+HD+ Sbjct: 8 KPIIELRSLKKSYNENTIIDNFNLTINNGEFLTILGPSGCGKTTVLRLIAGFEEANGGQIILDGEDVTDLPAEHRPVNTVF---QSYALFPHMTIFENVAFGLRMQKVPNEEIKPRVLEALRMVQLEEMADRKPTQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFIFVTHDQ 201
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: YJQ1_SCHPO (Uncharacterized ABC transporter ATP-binding protein C825.01 OS=Schizosaccharomyces pombe GN=SPCC825.01 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.015e-17 Identity = 51/188 (27.13%), Postives = 98/188 (52.13%), Query Frame = 3 Query: 30 VTIKNLEFGYEDR-LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFVKQIVIE*W 590 + +++ F Y +F++ N ++ + A++GPNG GK+TL+KLI+ +P G V+ H + F Q+ + LD+ + +E + + +++ ++GR + LS G++ R+ F + +L+LDEPTN LDI + L +A++ + G V+ ++HD + Q+ E W Sbjct: 594 IKFQDVSFNYPGGPTIFSKLNFGLDLKSRVALVGPNGAGKTTLIKLILEKVQPSTGSVVR-HHGLRLALFNQHMGDQLDMRLSAVEWLRTKFGNKPEGEMRRIVGRYGLTGKSQVIPMGQLSDGQRRRVLFAFLGMTQPHILLLDEPTNALDIDTIDALADALNNFDGGVVFITHDFRLIDQVAEEIW 780
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: ABCF3_ENCCU (Probable ATP-binding cassette sub-family F member 3 homolog OS=Encephalitozoon cuniculi GN=ECU05_1190 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.015e-17 Identity = 54/181 (29.83%), Postives = 94/181 (51.93%), Query Frame = 3 Query: 24 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFV 566 +++ N+ F Y + ++ I + ++G NG GKST LKL+ G + G ++ ++ YF Q+ + L +++ VL+ + ++ + ++ + L D ++ + LSGG+K+RL F LLVLDEPTNHLD+ + L EA+ + G V+ VSHD F+ Sbjct: 349 ALIEFVNVVFSYGCGKVLGGLSMKINSDSRIVVVGANGQGKSTFLKLLAGKLEATEGSIIRAP-SLRVGYFAQHHIDHLRVNENVLDFMMKS---YTQEEARRALASFGLSVD--NQCIGTLSGGQKSRLGFAIINGLSPNLLVLDEPTNHLDMESIDALAEALGRFNGAVVCVSHDLSFI 523 HSP 2 Score: 79.7221 bits (195), Expect = 2.436e-14 Identity = 64/188 (34.04%), Postives = 90/188 (47.87%), Query Frame = 3 Query: 72 LFNRANLTIERGEKTAIIGPNGCGKSTLLKLI----MGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFVK---QIVIE*WRLKAAIYR 614 + A LTI RG K ++G NG GK+TLLK I G+ PRG + + + +++ V E ED+ + +L F DM + + LSGG + R K + LL+LDEPTN+LDI LE I E K TVI VSHDR F+ ++++ LK +YR Sbjct: 104 IIREAPLTIVRGRKYGLVGRNGIGKTTLLKAIRKRRFGI--PRGMRIYMIKQDLI---------------------VDETVEDFAGAEAGRILNGLGFTKDMAVKNMRDLSGGWRMRAHLAKAINADPDLLLLDEPTNYLDINALSWLEGKIKELK-TVIIVSHDRNFLNNTTEMILHLNDLKIDVYR 267
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: SSUB1_RHILO (Aliphatic sulfonates import ATP-binding protein ssuB 1 OS=Rhizobium loti GN=ssuB1 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.945e-17 Identity = 64/202 (31.68%), Postives = 103/202 (50.99%), Query Frame = 3 Query: 3 TRPR---SGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGE----HNVLPNYFEQ-------NQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD----IPFKEMLEEAISEYKGTVITVSHD 554 TRP GR K +E + D+++ + +L + G+ A+IG +GCGKSTLL+L+ GL++P G + LG H+ F++ + + +++ T + +A + R DI G +G AD D S+LSGG+K R+A + +V +L LDEP LD I +++LE K T + V+HD Sbjct: 19 TRPAISVEGRRAFAFKGVEKRFGDKIVLDGIDLDVPAGQFVAVIGKSGCGKSTLLRLLAGLDRPTSGSLTLGAEEEGHSRTRFMFQEPRLLPWASVVKNVEIGLTGIAAGQDARQ--RALDILGEVG----LADRADEWPSVLSGGQKQRVALARALVGHPQILALDEPLGALDALTRIEMQQLLERIWLAQKFTAVLVTHD 214 The following BLAST results are available for this feature:
BLAST of EY728236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728236 ID=EY728236; Name=EY728236; organism=Citrus sinensis; type=EST; length=892bpback to top |