EY728236

Overview
NameEY728236
Unique NameEY728236
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: ZNUC_ECOLI (Zinc import ATP-binding protein znuC OS=Escherichia coli (strain K12) GN=znuC PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12
Identity = 54/188 (28.72%), Postives = 94/188 (50.00%), Query Frame = 3
Query:   24 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETV---AEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD----IPFKEMLEEAISEYKGTVITVSHDRYFV 566
            S+V+++N+   +  R + +  +L ++ G+   ++GPNG GKSTL+++++GL  P  G V+     +   Y  Q     L LD T+  TV            +DI   L R      +++  +  LSGGE  R+   + ++    LLVLDEPT  +D    +   +++++   E    V+ VSHD + V
Sbjct:    3 SLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVTPDEG-VIKRNGKLRIGYVPQK----LYLDTTLPLTVNRFLRLRPGTHKEDILPALKRVQ-AGHLINAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCGVLMVSHDLHLV 184          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: ZNUC_ECOL6 (Zinc import ATP-binding protein znuC OS=Escherichia coli O6 GN=znuC PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12
Identity = 54/188 (28.72%), Postives = 94/188 (50.00%), Query Frame = 3
Query:   24 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETV---AEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD----IPFKEMLEEAISEYKGTVITVSHDRYFV 566
            S+V+++N+   +  R + +  +L ++ G+   ++GPNG GKSTL+++++GL  P  G V+     +   Y  Q     L LD T+  TV            +DI   L R      +++  +  LSGGE  R+   + ++    LLVLDEPT  +D    +   +++++   E    V+ VSHD + V
Sbjct:    3 SLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVTPDEG-VIKRNGKLRIGYVPQK----LYLDTTLPLTVNRFLRLRPGTHKEDILPALKRVQ-AGHLINAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCGVLMVSHDLHLV 184          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: ZNUC_ECOL5 (Zinc import ATP-binding protein znuC OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=znuC PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12
Identity = 54/188 (28.72%), Postives = 94/188 (50.00%), Query Frame = 3
Query:   24 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETV---AEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD----IPFKEMLEEAISEYKGTVITVSHDRYFV 566
            S+V+++N+   +  R + +  +L ++ G+   ++GPNG GKSTL+++++GL  P  G V+     +   Y  Q     L LD T+  TV            +DI   L R      +++  +  LSGGE  R+   + ++    LLVLDEPT  +D    +   +++++   E    V+ VSHD + V
Sbjct:    3 SLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVTPDEG-VIKRNGKLRIGYVPQK----LYLDTTLPLTVNRFLRLRPGTHKEDILPALKRVQ-AGHLINAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCGVLMVSHDLHLV 184          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: ZNUC_ECOK1 (Zinc import ATP-binding protein znuC OS=Escherichia coli O1:K1 / APEC GN=znuC PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12
Identity = 54/188 (28.72%), Postives = 94/188 (50.00%), Query Frame = 3
Query:   24 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETV---AEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD----IPFKEMLEEAISEYKGTVITVSHDRYFV 566
            S+V+++N+   +  R + +  +L ++ G+   ++GPNG GKSTL+++++GL  P  G V+     +   Y  Q     L LD T+  TV            +DI   L R      +++  +  LSGGE  R+   + ++    LLVLDEPT  +D    +   +++++   E    V+ VSHD + V
Sbjct:    3 SLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVTPDEG-VIKRNGKLRIGYVPQK----LYLDTTLPLTVNRFLRLRPGTHKEDILPALKRVQ-AGHLINAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCGVLMVSHDLHLV 184          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: ZNUC_ECO57 (Zinc import ATP-binding protein znuC OS=Escherichia coli O157:H7 GN=znuC PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12
Identity = 54/188 (28.72%), Postives = 94/188 (50.00%), Query Frame = 3
Query:   24 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETV---AEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD----IPFKEMLEEAISEYKGTVITVSHDRYFV 566
            S+V+++N+   +  R + +  +L ++ G+   ++GPNG GKSTL+++++GL  P  G V+     +   Y  Q     L LD T+  TV            +DI   L R      +++  +  LSGGE  R+   + ++    LLVLDEPT  +D    +   +++++   E    V+ VSHD + V
Sbjct:    3 SLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVTPDEG-VIKRNGKLRIGYVPQK----LYLDTTLPLTVNRFLRLRPGTHKEDILPALKRVQ-AGHLINAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCGVLMVSHDLHLV 184          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: YURJ_BACSU (Uncharacterized ABC transporter ATP-binding protein yurJ OS=Bacillus subtilis GN=yurJ PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12
Identity = 59/201 (29.35%), Postives = 98/201 (48.76%), Query Frame = 3
Query:   30 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLL-GEH-NVLP-----------NY-------FEQNQAEALDLDKTVLETVAEAAE-DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISE----YKGTVITVSHDR 557
            +T ++++  Y  +L     +L ++  E   ++GP+GCGKST L+++ GLE    G +L+ GE  N LP           NY          N A  L L K   + +AE      RI +I+ L          L RK   LSGG++ R+A  + +V+   + ++DEP ++LD   +  +   IS+     + T+I V+HD+
Sbjct:    4 LTFEHVKKSYHSQLTVKDFDLDVKDKELLVLVGPSGCGKSTTLRMVAGLESISEGNLLIDGERVNDLPPKERDIAMVFQNYALYPHMTVFDNMAFGLKLRKMAKQEIAERVHAAARILEIEHL----------LKRKPKALSGGQRQRVALGRSIVREPKVFLMDEPLSNLDAKLRVTMRTEISKLHQRLEATIIYVTHDQ 194          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: YBBL_ECOLI (Uncharacterized ABC transporter ATP-binding protein ybbL OS=Escherichia coli (strain K12) GN=ybbL PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12
Identity = 54/192 (28.12%), Postives = 90/192 (46.88%), Query Frame = 3
Query:   27 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV---LPNYFEQNQAEALDLDKTVLETVAE-AAEDWRIDD-------IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFK----EMLEEAISEYKGTVITVSHDR 557
            ++ ++N+ +   D  + N  N ++  GE   I GP+GCGKSTLLK++  L  P  G +L    +V    P  + Q  +          +TV +     W+I +           L R      +L + ++ LSGGEK R++  + +     +L+LDE T+ LD   K    EM+   + E    V+ V+HD+
Sbjct:    7 LLQLQNVGYLAGDAKILNNINFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEIYRQQVSYCAQTPTLFGDTVYDNLIFPWQIRNRQPDPAIFLDFLERFALPDSILTKNIAELSGGEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEMIHRYVREQNIAVLWVTHDK 198          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: Y888_HELPY (Probable iron chelatin transport ATP-binding protein HP_0888 OS=Helicobacter pylori GN=HP_0888 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12
Identity = 48/184 (26.09%), Postives = 95/184 (51.63%), Query Frame = 3
Query:   27 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-RGGEVLLGEHNVLP----------NYFEQNQAEALDLDKTVLETVAEAA--------EDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISE 521
            V+ +KNL F Y  +L+ ++ + ++ +   T+I+ PNG GK+TLLK ++GL KP    E+     ++LP           Y  Q +  A +        + +A         +   I +   +L R + ++ + D+ ++ LSGG++  +   + +++ + LL+LDEPT+ LD+  + +  +AI +
Sbjct:    2 VLEVKNLSFKYSQKLILDKLSFSVPKNSITSILAPNGSGKTTLLKCLLGLLKPLEETEIKACNKDILPLKPYEKAKLIAYIPQVEYYAFNFSVLDFVLMGKATHLNLFAMPKAKHIKEATSVLERLDLES-LKDQGINDLSGGQRQMVLLARSLLQRTPLLLLDEPTSALDLKNQALFFDAIKD 184          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: Y888_HELPJ (Probable iron chelatin transport ATP-binding protein jhp_0821 OS=Helicobacter pylori J99 GN=jhp_0821 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12
Identity = 48/184 (26.09%), Postives = 95/184 (51.63%), Query Frame = 3
Query:   27 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-RGGEVLLGEHNVLP----------NYFEQNQAEALDLDKTVLETVAEAA--------EDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISE 521
            V+ +KNL F Y  +L+ ++ + ++ +   T+I+ PNG GK+TLLK ++GL KP    E+     ++LP           Y  Q +  A +        + +A         +   I +   +L R + ++ + D+ ++ LSGG++  +   + +++ + LL+LDEPT+ LD+  + +  +AI +
Sbjct:    2 VLEVKNLSFKYSQKLILDKLSFSVPKNSITSILAPNGSGKTTLLKCLLGLLKPLEETEIKACNKDILPLKPYEKAKLIAYIPQVEYYAFNFSVLDFVLMGKATHLNLFAMPKAKHIKEATSVLERLDLES-LKDQGINDLSGGQRQMVLLARSLLQRTPLLLLDEPTSALDLKNQALFFDAIKD 184          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: Y3946_ANASP (Putative ABC transporter ATP-binding protein alr3946 OS=Anabaena sp. (strain PCC 7120) GN=alr3946 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12
Identity = 62/205 (30.24%), Postives = 93/205 (45.37%), Query Frame = 3
Query:   21 RSVVTIKNLEFGYE--DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV---LPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNF-------------------KADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISE-YKG--TVITVSHD 554
            +S++T + + + Y    + + N   L I +G++ A+IG NGCGK+TL  L  GL KP+ G V   E  +     N  +  Q   L       + VA   E    +DI    G CN                      ++ +R V  LS G+K R++    MV    LL+LDEPT +LD P    L   +++ YK   T++  SHD
Sbjct:    3 QSLLTFEQVYYTYPGTQQSVLNGITLQIPQGKRCALIGRNGCGKTTLFSLANGLYKPQQGRVYWQEKALQYDRKNLMQLRQKVGLVFQNPEQQLVASTVE----EDIS--YGLCNLGLPIADIQQRVTQALVEFELTELAERPVHHLSLGQKKRVSLADVMVLRPELLLLDEPTAYLDRPQSRNLMAMLNKIYKSGTTILMASHD 201          
The following BLAST results are available for this feature:
BLAST of EY728236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ZNUC_ECOLI6.634e-1228.72Zinc import ATP-binding protein znuC OS=Escherichi... [more]
ZNUC_ECOL66.634e-1228.72Zinc import ATP-binding protein znuC OS=Escherichi... [more]
ZNUC_ECOL56.634e-1228.72Zinc import ATP-binding protein znuC OS=Escherichi... [more]
ZNUC_ECOK16.634e-1228.72Zinc import ATP-binding protein znuC OS=Escherichi... [more]
ZNUC_ECO576.634e-1228.72Zinc import ATP-binding protein znuC OS=Escherichi... [more]
YURJ_BACSU6.634e-1229.35Uncharacterized ABC transporter ATP-binding protei... [more]
YBBL_ECOLI6.634e-1228.13Uncharacterized ABC transporter ATP-binding protei... [more]
Y888_HELPY6.634e-1226.09Probable iron chelatin transport ATP-binding prote... [more]
Y888_HELPJ6.634e-1226.09Probable iron chelatin transport ATP-binding prote... [more]
Y3946_ANASP6.634e-1230.24Putative ABC transporter ATP-binding protein alr39... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-001-C03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728236 ID=EY728236; Name=EY728236; organism=Citrus sinensis; type=EST; length=892bp
CCACGCGTCCGAGAAGTGGTAGATCTGTTGTAACAATTAAGAACCTGGAA
TTTGGATACGAGGATAGACTTCTGTTTAATCGAGCAAATCTCACAATTGA
AAGGGGAGAGAAAACTGCCATCATTGGCCCAAATGGTTGTGGTAAGAGTA
CTTTGCTGAAATTGATAATGGGTTTAGAGAAGCCAAGAGGAGGTGAAGTT
CTGCTTGGTGAGCATAATGTCCTACCAAACTATTTTGAGCAGAATCAGGC
TGAGGCACTTGATTTGGACAAAACAGTACTTGAGACAGTAGCAGAAGCTG
CAGAGGACTGGAGAATTGATGATATAAAGGGCCTCCTTGGTCGTTGTAAT
TTCAAAGCTGACATGCTTGATAGAAAGGTTTCCCTTTTGAGTGGTGGTGA
GAAGGCACGTCTTGCATTTTGCAAATTCATGGTAAAACCATCAACTCTTC
TAGTTTTGGATGAACCAACTAATCACTTGGATATTCCTTTCAAAGAGATG
CTCGAGGAGGCCATATCAGAGTACAAGGGCACAGTAATCACAGTTTCTCA
TGACCGATACTTCGTAAAGCAAATAGTAATAGAGTAGTGGAGGTTAAAGG
CAGCAATTTACAGGACTATGCTTGTGATTACAATTATTACCTAGAGAAAA
ACCTCCATGCTCGGGAAAGGGACCTTGAACGTGAGGCAGAGCTCCAAGAA
AAGGCTTCCAAAAATCAAGGCCAATCCNAGATGTCAAAGGCTGAGAAGGA
AGCTCGGAAGAAACAGAAATGCAGGCCTTTCAAGCAGCGAAACAAAATCA
AAAGGCTCGAAGATGGCAAAAATGGAAATGAAAGATAACCCGTATATATG
CGAAGGAAATCCATTGTACCTAATTTGCTGAGCAAATTCAGG
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