EY728236
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: UGPC_RHIME (sn-glycerol-3-phosphate import ATP-binding protein ugpC OS=Rhizobium meliloti GN=ugpC PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12 Identity = 54/196 (27.55%), Postives = 98/196 (50.00%), Query Frame = 3 Query: 24 SVVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAE--------ALDLDKTVLETVAEAAEDWRI--DDIKGLLGRCNFKADM---LDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYK----GTVITVSHDR 557 + +T+K++ Y D +L I GE ++GP+GCGKSTLL++I GLE GE+ +G+ V N E ++ + AL TV + ++ ++ ++I+ + + ++ LDRK LSGG++ R+A + +V+ + DEP ++LD + + I + T + V+HD+ Sbjct: 2 ATITLKDVHKTYHGDIAAIRGVSLAIADGEFIVLVGPSGCGKSTLLRMIAGLESITSGEISIGDRVV--NGLEPSERDIAMVFQNYALYPHMTVRQNLSYGLKNRNTPKEEIERRIAKAAKSLEIEPFLDRKPRQLSGGQRQRVAMGRAIVREPAAFLFDEPLSNLDAKLRVQMRVEIKRLQRALGTTSVYVTHDQ 195
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: TROB_TREPA (Zinc transport system ATP-binding protein troB OS=Treponema pallidum GN=troB PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12 Identity = 57/192 (29.69%), Postives = 87/192 (45.31%), Query Frame = 3 Query: 30 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLL-----GEHNVLPNYFEQNQAEALDLDKTVLETV---AEAAEDWRIDDIKGLLGRCNFKAD------MLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKG---TVITVSHD 554 V + +L Y + + ++ I G AIIGPNG GKSTLLK IMGL GEV + + Y Q A D TV + V + + W + K R + LDR++S LSGG++ R+ + +V+ + L +DEP +D ++ + + KG T++ V HD Sbjct: 11 VQVDDLTLAYRQKPVLWDVDVRIPEGVIEAIIGPNGAGKSTLLKAIMGLLPLASGEVRVFGRPFSKERRRVAYVPQRSAVDWDFPTTVFDVVLMGSYGSLGWILRPGKREKARAREAIEEVGMGAFLDRQISELSGGQQQRVFLARALVQDADLYFMDEPFQGVDAATEQAIVTLLKTLKGRGKTLLVVHHD 202
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: THIQ_PHOLL (Thiamine import ATP-binding protein thiQ OS=Photorhabdus luminescens subsp. laumondii GN=thiQ PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12 Identity = 54/192 (28.12%), Postives = 98/192 (51.04%), Query Frame = 3 Query: 27 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHN----------VLPNYFEQNQAEALDLDKTVLETVAEAAE--DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKE----MLEEAISEYKGTVITVSHD 554 ++ ++NL + YE ++ R +L I+ GE+ AI+GP+G GKSTLL LI G + G + L N V + E N L +++ + + + ++ ++ + + + D L R + LSGG++ R A + +V+ +L+LDEP + LD + +LE+ E + T++ VSH+ Sbjct: 1 MLKLENLTYRYEHLMM--RFDLHIQAGERIAILGPSGAGKSTLLNLIAGFQTAEKGSLWLNGENHTSTSPAQRPVSMLFQENNLFSHLTIEQNIGLGLHPGLRLNSTQKQTLQQIVSQVSLE-DCLPRLPAQLSGGQRQRAALARCLVRQQPILLLDEPFSALDPALRNEMLVLLEQVCHERQLTLLMVSHN 189
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: THIQ_ECO57 (Thiamine import ATP-binding protein thiQ OS=Escherichia coli O157:H7 GN=thiQ PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12 Identity = 55/179 (30.73%), Postives = 88/179 (49.16%), Query Frame = 3 Query: 81 RANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLG--EHNVLP-------NYFEQNQAEALDLDKTVLETVA---------EAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKE----MLEEAISEYKGTVITVSH 551 R +LT+ERGE+ AI+GP+G GKSTLL LI G P G + + +H P F++N L TV + + A + ++ I +G N A R LSGG++ R+A + +V+ +L+LDEP + LD ++ ++ + + K T++ VSH Sbjct: 17 RFSLTVERGEQVAILGPSGAGKSTLLNLIAGFLTPASGALTIDGVDHTTTPPSRRPVSMLFQENN---LFSHLTVAQNIGLGLNPGLKLNAVQQEKMHAIARQMGIDNLMA----RLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSTSCQQQKMTLLMVSH 188
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: TAP1_GORGO (Antigen peptide transporter 1 OS=Gorilla gorilla gorilla GN=TAP1 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12 Identity = 58/210 (27.62%), Postives = 100/210 (47.62%), Query Frame = 3 Query: 27 VVTIKNLEFGYEDR---LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLG-------EHNVL----------PNYF----EQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD----IPFKEMLEEAISEYKGTVITVSHDRYFVKQ 572 +V +++ F Y +R L+ T+ GE TA++GPNG GKST+ L+ L +P GG++LL EH L P F ++N A L T+ E A A + I GL + + + S LSGG++ +A + +++ +L+LD+ T+ LD + +++L E+ Y +V+ ++ V+Q Sbjct: 502 LVQFQDVSFAYPNRPDVLVLQGLTFTLHPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGKPLPQYEHRYLHRQVAAVGQEPQVFGRSLQENIAYGLTQKPTMEEITAAAVKCGAHSFISGLPQGYDTE---VGEAGSQLSGGQRQAVALARALIRKPCVLILDDATSALDANSQLQVEQLLYESPERYSRSVLLITQHLSLVEQ 708
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: SSUB_ZYMMO (Aliphatic sulfonates import ATP-binding protein ssuB OS=Zymomonas mobilis GN=ssuB PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12 Identity = 50/163 (30.67%), Postives = 84/163 (51.53%), Query Frame = 3 Query: 87 NLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLG---EHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD----IPFKEMLEEAISEYKGTVITVSHD 554 ++ I G+ A++G +GCGKSTLL+LI LE+P G++L+ + P+ Q L ++VL+ V A+D + L N D + +LSGG+ R++ + + +L+LDEP LD + ++++E E K TV+ V+HD Sbjct: 25 DIAIPEGQFVALVGESGCGKSTLLRLISHLERPTSGQLLIDGKERRKINPSVRYLFQEARLLPWRSVLDNVRLGAKDRDKKTARESLESVNL-LDKENEWPEILSGGQCQRVSLARALAGKPKILLLDEPLGALDALTRVQMQKLIESLWLEQKFTVLLVTHD 186
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: SSUB_BRAJA (Aliphatic sulfonates import ATP-binding protein ssuB OS=Bradyrhizobium japonicum GN=ssuB PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12 Identity = 56/184 (30.43%), Postives = 85/184 (46.20%), Query Frame = 3 Query: 30 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQ--NQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD----IPFKEMLEEAISEYKGTVITVSHD 554 ++I+ L + D + +L I G+ AI+G +GCGKSTLL+LI GL+K G + LG +V P + L + + D D + + AD D+ S+LSGG+K R+A + +V +L DEP LD I + +LE + T I V+HD Sbjct: 40 LSIRGLRKSFGDNEVLRGIDLHIPAGQFVAIVGKSGCGKSTLLRLIAGLDKIDAGTISLGS-DVQPEDIRVMFQEPRLLPWARVLANVEVGLGRDRASKDAHARAEKALTEVGLADKRDQWPSVLSGGQKQRVALGRALVSRPRVLAFDEPLGALDALTRISMQRLLERVWRDQGFTAILVTHD 222
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: PSTB_XANC5 (Phosphate import ATP-binding protein pstB OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=pstB PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12 Identity = 56/201 (27.86%), Postives = 91/201 (45.27%), Query Frame = 3 Query: 30 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGL-----EKPRGGEVLLGEHNVLPNYFEQNQAEA---------LDLDKTVLETVA----------EAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKG--TVITVSHD 554 V +NL+F Y+ N+ I TA+IGP+GCGKSTLL++ + + GEVLL N+L + N+ + + T+ E VA +A R++ + D L + LSGG++ RL + + +L+LDEPT+ LD +E+ + E K T++ V+H+ Sbjct: 21 VAARNLDFYYDKYHALKSINIEIPEKRVTALIGPSGCGKSTLLRIFNRIYALYPKMEARGEVLLDNENILSPKYPMNRLRSKVGMVFQKPVPFPMTIFENVAYGIRHHEKLSKADMQNRVEQALRQGALWDEVKDKLGQSALGLSGGQQQRLCIARAVALRPDVLLLDEPTSALDPISTSRIEQLVEELKRDYTIVIVTHN 221
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: PSTB_XANAC (Phosphate import ATP-binding protein pstB OS=Xanthomonas axonopodis pv. citri GN=pstB PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12 Identity = 56/201 (27.86%), Postives = 91/201 (45.27%), Query Frame = 3 Query: 30 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGL-----EKPRGGEVLLGEHNVLPNYFEQNQAEA---------LDLDKTVLETVA----------EAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKG--TVITVSHD 554 V +NL+F Y+ N+ I TA+IGP+GCGKSTLL++ + + GEVLL N+L + N+ + + T+ E VA +A R++ + D L + LSGG++ RL + + +L+LDEPT+ LD +E+ + E K T++ V+H+ Sbjct: 21 VAARNLDFYYDKYHALKSINIEIPEKRVTALIGPSGCGKSTLLRIFNRIYALYPKMEARGEVLLDNENILSPKYPMNRLRSKVGMVFQKPVPFPMTIFENVAYGIRHHEKLSKADMQNRVEQALRQGALWDEVKDKLGQSALGLSGGQQQRLCIARAVALRPDVLLLDEPTSALDPISTSRIEQLVEELKRDYTIVIVTHN 221
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: PSTB_GLUOX (Phosphate import ATP-binding protein pstB OS=Gluconobacter oxydans GN=pstB PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12 Identity = 56/207 (27.05%), Postives = 93/207 (44.93%), Query Frame = 3 Query: 12 RSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLE-----KPRGGEVLLGEHNVL-------------------PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKG--TVITVSHD 554 +S + ++NL F Y + + ++ TA+IGP+GCGKSTLL++ + + GEV+ NVL P F + + + + E + +A D R+ D+ + N D L+ S LSGG++ RL + + +L+LDEPT+ LD +EE + E K T+ V+H+ Sbjct: 16 KSPEVALAVRNLNFYYGENHALHDISIDFPARRVTAMIGPSGCGKSTLLRVFNRMYDLYPGQRATGEVIFDGRNVLERDLDLNILRARVGMVFQKPTPFPMSIYDNIAFGVRLHEKLNKAEMDARVQDVLTRVALWNEVRDRLNAPASGLSGGQQQRLCIARSIATRPEVLLLDEPTSALDPISTARIEELLDELKEEFTIAIVTHN 222 The following BLAST results are available for this feature:
BLAST of EY728236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728236 ID=EY728236; Name=EY728236; organism=Citrus sinensis; type=EST; length=892bpback to top |