EY728236
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: AB14B_ARATH (ABC transporter B family member 14 OS=Arabidopsis thaliana GN=ABCB14 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12 Identity = 53/193 (27.46%), Postives = 94/193 (48.70%), Query Frame = 3 Query: 45 LEFGYEDR--LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------------PNYFEQNQAE--ALDLDKTVLETVAEAAEDWRIDD-IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEY--KGTVITVSH 551 + F Y R ++F + TI G+ A +GP+G GKST++ ++ +PR GE+LL +++ P F A L +K ++ + EAA+ D IK L N + + LSGG+K R+A + +++ +L+LDE T+ LD ++++++A+ K T I ++H Sbjct: 378 VSFAYPSRPNMVFENLSFTIHSGKTFAFVGPSGSGKSTIISMVQRFYEPRSGEILLDGNDIKNLKLKWLREQMGLVSQEPALFATTIASNILLGKEKANMDQIIEAAKAANADSFIKSLPNGYN---TQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESEKIVQQALDNVMEKRTTIVIAH 567
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: ZNUC_SHIFL (Zinc import ATP-binding protein znuC OS=Shigella flexneri GN=znuC PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.664e-12 Identity = 54/188 (28.72%), Postives = 94/188 (50.00%), Query Frame = 3 Query: 24 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETV---AEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD----IPFKEMLEEAISEYKGTVITVSHDRYFV 566 S+V+++N+ + R + + +L ++ G+ ++GPNG GKSTL+++++GL P G V+ + Y Q L LD T+ TV +DI L R +++ + LSGGE R+ + ++ LLVLDEPT +D + +++++ E V+ VSHD + V Sbjct: 3 SLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVTPDEG-VIKRNGKLRIGYVPQK----LYLDTTLPLTVNRFLRLRPGTHKEDILPALKRVQ-AGHLINAPMQKLSGGETQRVLLARALLNCPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCGVLMVSHDLHLV 184
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: ZNUC_SHIF8 (Zinc import ATP-binding protein znuC OS=Shigella flexneri serotype 5b (strain 8401) GN=znuC PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.664e-12 Identity = 54/188 (28.72%), Postives = 94/188 (50.00%), Query Frame = 3 Query: 24 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETV---AEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD----IPFKEMLEEAISEYKGTVITVSHDRYFV 566 S+V+++N+ + R + + +L ++ G+ ++GPNG GKSTL+++++GL P G V+ + Y Q L LD T+ TV +DI L R +++ + LSGGE R+ + ++ LLVLDEPT +D + +++++ E V+ VSHD + V Sbjct: 3 SLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVTPDEG-VIKRNGKLRIGYVPQK----LYLDTTLPLTVNRFLRLRPGTHKEDILPALKRVQ-AGHLINAPMQKLSGGETQRVLLARALLNCPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCGVLMVSHDLHLV 184
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: ZNUC_PSEAE (Zinc import ATP-binding protein znuC OS=Pseudomonas aeruginosa GN=znuC PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.664e-12 Identity = 54/185 (29.19%), Postives = 89/185 (48.11%), Query Frame = 3 Query: 24 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISE----YKGTVITVSHDRYFV 566 ++V + + + + + + +L IE G+ +IGPNG GK+TL++ ++GL KP GEV + Y Q L +VL + R + L R A +L+R + +SGGE R+ + +++ LLVLDEP +D+ + L I + Y V+ VSHD + V Sbjct: 4 ALVRLTQVGVSFNGQAVLSDVDLAIEPGQIVTLIGPNGAGKTTLVRSVLGLLKPHVGEVWRRPRLTI-GYMPQKLHVDATLPLSVLRFLRLVPGVKREQALAAL--REVGAAHVLERPLQSISGGELQRVLLARALLRKPELLVLDEPVQGVDVAGQAELYRLIGKLRDRYGCGVLMVSHDLHLV 185
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: ZNUC_PSEAB (Zinc import ATP-binding protein znuC OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=znuC PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.664e-12 Identity = 54/185 (29.19%), Postives = 89/185 (48.11%), Query Frame = 3 Query: 24 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISE----YKGTVITVSHDRYFV 566 ++V + + + + + + +L IE G+ +IGPNG GK+TL++ ++GL KP GEV + Y Q L +VL + R + L R A +L+R + +SGGE R+ + +++ LLVLDEP +D+ + L I + Y V+ VSHD + V Sbjct: 4 ALVRLTQVGVSFNGQAVLSDVDLAIEPGQIVTLIGPNGAGKTTLVRSVLGLLKPHVGEVWRRPRLTI-GYMPQKLHVDATLPLSVLRFLRLVPGVKREQALAAL--REVGAAHVLERPLQSISGGELQRVLLARALLRKPELLVLDEPVQGVDVAGQAELYRLIGKLRDRYGCGVLMVSHDLHLV 185
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: YKOD_BACSU (Putative HMP/thiamine import ATP-binding protein ykoD OS=Bacillus subtilis GN=ykoD PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 8.664e-12 Identity = 57/199 (28.64%), Postives = 91/199 (45.73%), Query Frame = 3 Query: 15 SGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDL------DKTVLETV------AEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKG---TVITVSHDRYFV 566 SG SV+ + +L F + +F + ++ G TA++GPNG GKSTLL ++ L KP+ G++LL + L Y E+ + + + V +TV + A + LL R A + D +S G+K RL+ ++ +L+LDEPT D E I K V+ ++HD V Sbjct: 290 SGESVLEVSSLSFARGQQAIFKDISFSLREGSLTALVGPNGTGKSTLLSVLASLMKPQSGKILLYD-QPLQKYKEKELRKRMGFVFQNPEHQFVTDTVYDELLFGQKANAETEKKAQHLLQRFGL-AHLADHHPFAISQGQKRRLSVATMLMHDVKVLLLDEPTFGQDARTAAECMEMIQRIKAEGTAVLMITHDMELV 486
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: Y3108_BRUME (Putative ATP-binding protein BMEII0108 OS=Brucella melitensis GN=BMEII0108 PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 8.664e-12 Identity = 56/182 (30.77%), Postives = 85/182 (46.70%), Query Frame = 3 Query: 30 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN---QAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD----IPFKEMLEEAISEYKGTVITVSHD 554 ++ N+ Y L +R NL I GE ++GP+GCGKST + + GL +P GG +L+G+ V E+ Q AL TV + V D+ AD L + LSGG K R A + +L++DEP LD + ++ L +A S + TV+ ++HD Sbjct: 5 ISFNNVVMRYGGFLALDRLNLDIADGEFVTVVGPSGCGKSTAMNIADGLLQPSGGGILVGDKPVTGPGPERGVIFQQYALFPWLTVRQNVEFGLTDF---------------ADALPK---ALSGGMKQRCAIARAYAAAPEILLMDEPFGALDALTRVHMQDQLLDAWSRERRTVMFITHD 168
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: UGPC_PSYIN (sn-glycerol-3-phosphate import ATP-binding protein ugpC OS=Psychromonas ingrahamii (strain 37) GN=ugpC PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.664e-12 Identity = 56/199 (28.14%), Postives = 103/199 (51.76%), Query Frame = 3 Query: 24 SVVTIKNLEFGYEDRL-LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAE--------ALDLDKTVLETVAEAAEDWRID--DIKGLLGRCNFKADM------LDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYK----GTVITVSHDR 557 S +T+ N+ Y + ++ +L IE GE ++GP+GCGKSTLL++I GLE+ G++ + + L N E ++ + AL +V + +A + + DI+ ++ N A+M L+RK LSGG++ R+A + +V+ + + DEP ++LD + + I + + T + V+HD+ Sbjct: 2 STLTLSNITKSYPNGYQAVHKLSLNIEDGEMVVLVGPSGCGKSTLLRMIAGLEEITSGKLKIDD--CLVNNLEPSERDIAMVFQNYALYPHMSVYDNMAYGLRNRKTPKADIQRIV---NDTAEMLEIDHLLERKPKELSGGQRQRVAMGRAIVRKPKIFLFDEPLSNLDAKLRVQMRLQIKKLQRRLATTSVYVTHDQ 195
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: UGPC_BRAJA (sn-glycerol-3-phosphate import ATP-binding protein ugpC OS=Bradyrhizobium japonicum GN=ugpC PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.664e-12 Identity = 56/203 (27.59%), Postives = 94/203 (46.31%), Query Frame = 3 Query: 30 VTIKNLEFGYEDRL-LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVL----------------------ETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYK----GTVITVSHDR 557 VT++N+ Y N+ + G+ ++GP+GCGKSTLL+++ GLE GGE+ +G V NQ E D D ++ +AEA R+++ +L ML+RK LSGG++ R+A + +V+ + + DEP ++LD + + I + + T I V+HD+ Sbjct: 4 VTLRNVRKTYTGGFEAIKGVNVDVADGQFCVLVGPSGCGKSTLLRMVAGLETVTGGEIDIGGRVV-------NQIEPADRDIAMVFQNYALYPHMSVYNNMAYGLRNRGMAEAEIKTRVEEAARVLE----LTSMLERKPRQLSGGQRQRVAMGRAIVRQPKVFLFDEPLSNLDAKLRIAMRVEIRKLQRRLNTTSIYVTHDQ 195
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: THIQ_VIBF1 (Thiamine import ATP-binding protein thiQ OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=thiQ PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.664e-12 Identity = 53/174 (30.46%), Postives = 84/174 (48.28%), Query Frame = 3 Query: 87 NLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN------QAEALDLDKTVLETVA---------EAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKE----MLEEAISEYKGTVITVSH 551 +L +E+G AI+GP+G GKSTLL L+ G +P G++ + + L Q Q L +V E + + RI+D +G D+L R LSGG+K R+A + +V+ +L+LDEP + LD +E +++ I K TV+ V+H Sbjct: 19 DLNVEQGSVVAILGPSGAGKSTLLSLLAGFIEPESGDITINNESQLSLAPHQRPLSMLFQEHNLFAHLSVAENIGLGIKPNLRLNEKDKKRINDAARQVG----VDDLLQRLPEQLSGGQKQRVALARCLVQQKPVLLLDEPFSALDPILREEMIVLIQALIKSEKLTVLMVTH 188 The following BLAST results are available for this feature:
BLAST of EY728236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728236 ID=EY728236; Name=EY728236; organism=Citrus sinensis; type=EST; length=892bpback to top |