EY728236

Overview
NameEY728236
Unique NameEY728236
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: PSTB_BORBR (Phosphate import ATP-binding protein pstB OS=Bordetella bronchiseptica GN=pstB PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11
Identity = 56/199 (28.14%), Postives = 89/199 (44.72%), Query Frame = 3
Query:   36 IKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGL-----EKPRGGEVLLGEHNVL-------------------PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKG--TVITVSHD 554
            +KNL F Y         N++I   + TA IGP+GCGKSTLL+    +      +   GE+LL   N+L                   P  F  +  + +     + E +++   D R++         N   D L +  + LSGG++ RL   + +     +L+LDEP + LD      +EE I+E K   TV+ V+H+
Sbjct:   14 VKNLNFYYGKFHAIRNVNMSIRENKVTAFIGPSGCGKSTLLRTFNRMFELYPGQRAEGEILLDGENLLTSKTDISLIRAKVGMVFQKPTPFPMSIYDNIAFGVRLFERLSKGEMDERVEWALSKAALWNEVKDKLHQSGNSLSGGQQQRLCIARGVAIKPEVLLLDEPCSALDPISTAKIEELIAELKHEYTVVIVTHN 212          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: POTA_GEOKA (Spermidine/putrescine import ATP-binding protein potA OS=Geobacillus kaustophilus GN=potA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11
Identity = 52/200 (26.00%), Postives = 98/200 (49.00%), Query Frame = 3
Query:   15 SGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGE---HNVLPNYFEQN---QAEALDLDKTVLETVA---------EAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKG----TVITVSHDR 557
            +G  ++  + +   Y+  ++ +  +  +ERG+   ++GP+GCGK+T+L+LI G  +P  G +        NV PN  + N   Q  AL     V E VA         EA    ++ +    +    ++     R++  +SGG++ R+A  + +V    +L+LDEP + LD+  +  ++  + E +     T I V+HD+
Sbjct:    2 NGEEIIRFERVTKEYDGTVVLDDVSFAMERGKFYTLLGPSGCGKTTILRLIAGFIEPTEGTIYFHGKPIQNVPPNKRQVNTVFQDYALFPHLDVFENVAFGLRVKKMKEADIRQKVSEALRFVNLEGYER----RRIQEMSGGQRQRVAIARAIVNEPEVLLLDEPLSALDLKLRTEMQYELRELQRRLGITFIFVTHDQ 197          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: NODI_BURPS (Nod factor export ATP-binding protein I OS=Burkholderia pseudomallei GN=nodI PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11
Identity = 54/194 (27.84%), Postives = 92/194 (47.42%), Query Frame = 3
Query:   30 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEV-LLGE------HNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDD------IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFVKQ 572
            +  + +E  Y+D+L+ +  +  ++ GE   ++GPNG GK+T LK+++G+  P  G + L GE       +         Q + LD D TV E +   A  + +        +  LL     ++   D KV  LSGG K RL   + +V    +LVLDEPT  LD   + ++ E +        T+    +F+++
Sbjct:    6 IDFQQVEKRYDDKLVVDGLSFHVQPGECFGLLGPNGAGKTTTLKMLLGITHPDAGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFARYFGLTAHAARALVPPLLEFAKLES-KADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEE 198          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: NODI_BURP1 (Nod factor export ATP-binding protein I OS=Burkholderia pseudomallei (strain 1710b) GN=nodI PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11
Identity = 54/194 (27.84%), Postives = 92/194 (47.42%), Query Frame = 3
Query:   30 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEV-LLGE------HNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDD------IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFVKQ 572
            +  + +E  Y+D+L+ +  +  ++ GE   ++GPNG GK+T LK+++G+  P  G + L GE       +         Q + LD D TV E +   A  + +        +  LL     ++   D KV  LSGG K RL   + +V    +LVLDEPT  LD   + ++ E +        T+    +F+++
Sbjct:    6 IDFQQVEKRYDDKLVVDGLSFHVQPGECFGLLGPNGAGKTTTLKMLLGITHPDAGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFARYFGLTAHAARALVPPLLEFAKLES-KADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEE 198          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: NODI_BURMA (Nod factor export ATP-binding protein I OS=Burkholderia mallei GN=nodI PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11
Identity = 54/194 (27.84%), Postives = 92/194 (47.42%), Query Frame = 3
Query:   30 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEV-LLGE------HNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDD------IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFVKQ 572
            +  + +E  Y+D+L+ +  +  ++ GE   ++GPNG GK+T LK+++G+  P  G + L GE       +         Q + LD D TV E +   A  + +        +  LL     ++   D KV  LSGG K RL   + +V    +LVLDEPT  LD   + ++ E +        T+    +F+++
Sbjct:    6 IDFQQVEKRYDDKLVVDGLSFHVQPGECFGLLGPNGAGKTTTLKMLLGITHPDAGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFARYFGLTAHAARALVPPLLEFAKLES-KADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEE 198          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: METN_FUSNN (Methionine import ATP-binding protein metN OS=Fusobacterium nucleatum subsp. nucleatum GN=metN PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11
Identity = 59/208 (28.37%), Postives = 99/208 (47.60%), Query Frame = 3
Query:   27 VVTIKNLEFGYEDRL-LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDK---------------TVLETVAEAAE--DWRIDDIKGLLGRCNFKADMLDRK---VSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD----IPFKEMLEEAISEYKGTVITVSHDRYFVKQI 575
            ++T++N+   Y + L      NL +  G+   IIG +G GKS+L++LI  LE+P  G++ +   N+L      N+ E L+  K               TV E VA A E  +W   DI   +        + D+     S LSGG+K R++  + +     +L+ DE T+ LD        E+++E   ++  TV+ ++H    VK+I
Sbjct:    1 MITLENVNKIYSNNLHAVKDVNLKVNEGDIFGIIGLSGAGKSSLIRLINRLEEPTSGKIFINGENIL----NLNKTELLERRKKIGMIFQHFNLLSSRTVEENVAFALEIANWNKKDIGKRVSELLEIVGLSDKAKYYPSQLSGGQKQRVSIARALANNPDILLSDEATSALDPKTTKSILELIKEIQQKFSLTVLMITHQMEVVKEI 204          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: LOLD_PSEF5 (Lipoprotein-releasing system ATP-binding protein lolD OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=lolD PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11
Identity = 59/209 (28.23%), Postives = 96/209 (45.93%), Query Frame = 3
Query:   39 KNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEV-LLGE------------------------HNVLPNYFE-QNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI----PFKEMLEEAISEYKGTVITVSHDRYFVKQI 575
            K+ E G E  ++ +   L +  GE+ AI+G +G GKSTLL L+ GL+ P  G V L GE                        H++LP +   +N    L + +T +    + A          LL R       L+ K + LSGGE+ R+A  + +V    L++LDEPT +LD       ++++ E  +  +   + V+HD    +Q+
Sbjct:   14 KSYEEGPESVVVLSGLQLELHPGERVAIVGTSGSGKSTLLNLLGGLDTPSKGSVWLAGEELSALGEKARGKLRNRALGFVYQFHHLLPEFTALENVCMPLLIGRTPIPEARQRA--------TALLERVGL-GHRLEHKPAELSGGERQRVAIARALVNKPGLVMLDEPTGNLDSHTAQGIQDLMLELSTSMRTAFLVVTHDMNLARQM 213          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: CHVD_RHIRD (ATP-binding protein chvD (Fragment) OS=Rhizobium radiobacter GN=chvD PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11
Identity = 32/69 (46.38%), Postives = 46/69 (66.67%), Query Frame = 3
Query:  369 DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFVKQI 575
            D  V+ LSGGE+ R+A CK ++    LL+LDEPTNHLD      LE+ + +Y G V+ ++HDRYF+  +
Sbjct:   51 DSAVTGLSGGERRRVALCKLLLSQPDLLLLDEPTNHLDAETIAWLEKHLRDYPGAVMMITHDRYFLDNV 119          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: CBRD_DICD3 (Achromobactin transport ATP-binding protein cbrD OS=Dickeya dadantii (strain 3937) GN=cbrD PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11
Identity = 53/204 (25.98%), Postives = 95/204 (46.57%), Query Frame = 3
Query:   24 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFK----------------------ADML-DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFK----EMLEEAISEYKGTVITVSHD 554
            + +T + L  GY  + + +  ++ +  G+ + +IG NG GKSTLLK    L KP  G V+L   ++      +    A+  +  +L  + +A E   +  +   LGR  ++                       DML +R V  LSGG++ R+     + + + +++LDEPT  LD+  +    ++L E   ++  T+I V HD
Sbjct:    2 TAITSRELTLGYASQTIIDNLDIQLPEGKVSVLIGSNGSGKSTLLKSFARLLKPLKGAVILNGEDI-----HRQSTAAVARELAILPQMPDAPEGITVKQLVS-LGRYPYQNWLQQWSEQDEAMVNQALRQTGTDMLAERPVDALSGGQRQRVWIAMTLGQDTEVVLLDEPTTFLDLAHQIEVLDLLRELNRQHGKTIIMVLHD 199          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: CBIO_THEMA (Putative cobalt import ATP-binding protein cbiO OS=Thermotoga maritima GN=cbiO PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11
Identity = 60/193 (31.09%), Postives = 95/193 (49.22%), Query Frame = 3
Query:   30 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP-------NYFEQNQAEALDLDKTVLETVAEAAEDWRIDD------IKGLLGRCNFKADMLDRKVSL-LSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFK----EMLEEAISEYKGTVITVSHD 554
            +T+ ++ F Y    +    N   E G+   ++G NG GK+TLLK++ GL +   GE+ L      P        Y  QN +  + +  TV E VA + E   +D+      IK +L         L+++  L LSGG+K RLA    + + +  L LDEP + LD P +    ++LE   +E KG +I V+H+
Sbjct:    3 ITLNSVSFRYNGDYVLKDVNAEFETGKIYVVVGKNGSGKTTLLKILAGLLEAE-GEIFLDGSPADPFLLRKNVGYVFQNPSSQI-IGATVEEDVAFSLEIMGLDESEMRKRIKKVLELVGLSG--LEKEDPLNLSGGQKQRLAIASMLARDTRFLALDEPVSMLDPPSQREIFQVLESLKNEGKG-IILVTHE 190          
The following BLAST results are available for this feature:
BLAST of EY728236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PSTB_BORBR1.132e-1128.14Phosphate import ATP-binding protein pstB OS=Borde... [more]
POTA_GEOKA1.132e-1126.00Spermidine/putrescine import ATP-binding protein p... [more]
NODI_BURPS1.132e-1127.84Nod factor export ATP-binding protein I OS=Burkhol... [more]
NODI_BURP11.132e-1127.84Nod factor export ATP-binding protein I OS=Burkhol... [more]
NODI_BURMA1.132e-1127.84Nod factor export ATP-binding protein I OS=Burkhol... [more]
METN_FUSNN1.132e-1128.37Methionine import ATP-binding protein metN OS=Fuso... [more]
LOLD_PSEF51.132e-1128.23Lipoprotein-releasing system ATP-binding protein l... [more]
CHVD_RHIRD1.132e-1146.38ATP-binding protein chvD (Fragment) OS=Rhizobium r... [more]
CBRD_DICD31.132e-1125.98Achromobactin transport ATP-binding protein cbrD O... [more]
CBIO_THEMA1.132e-1131.09Putative cobalt import ATP-binding protein cbiO OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-001-C03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728236 ID=EY728236; Name=EY728236; organism=Citrus sinensis; type=EST; length=892bp
CCACGCGTCCGAGAAGTGGTAGATCTGTTGTAACAATTAAGAACCTGGAA
TTTGGATACGAGGATAGACTTCTGTTTAATCGAGCAAATCTCACAATTGA
AAGGGGAGAGAAAACTGCCATCATTGGCCCAAATGGTTGTGGTAAGAGTA
CTTTGCTGAAATTGATAATGGGTTTAGAGAAGCCAAGAGGAGGTGAAGTT
CTGCTTGGTGAGCATAATGTCCTACCAAACTATTTTGAGCAGAATCAGGC
TGAGGCACTTGATTTGGACAAAACAGTACTTGAGACAGTAGCAGAAGCTG
CAGAGGACTGGAGAATTGATGATATAAAGGGCCTCCTTGGTCGTTGTAAT
TTCAAAGCTGACATGCTTGATAGAAAGGTTTCCCTTTTGAGTGGTGGTGA
GAAGGCACGTCTTGCATTTTGCAAATTCATGGTAAAACCATCAACTCTTC
TAGTTTTGGATGAACCAACTAATCACTTGGATATTCCTTTCAAAGAGATG
CTCGAGGAGGCCATATCAGAGTACAAGGGCACAGTAATCACAGTTTCTCA
TGACCGATACTTCGTAAAGCAAATAGTAATAGAGTAGTGGAGGTTAAAGG
CAGCAATTTACAGGACTATGCTTGTGATTACAATTATTACCTAGAGAAAA
ACCTCCATGCTCGGGAAAGGGACCTTGAACGTGAGGCAGAGCTCCAAGAA
AAGGCTTCCAAAAATCAAGGCCAATCCNAGATGTCAAAGGCTGAGAAGGA
AGCTCGGAAGAAACAGAAATGCAGGCCTTTCAAGCAGCGAAACAAAATCA
AAAGGCTCGAAGATGGCAAAAATGGAAATGAAAGATAACCCGTATATATG
CGAAGGAAATCCATTGTACCTAATTTGCTGAGCAAATTCAGG
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