EY728236

Overview
NameEY728236
Unique NameEY728236
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: ZNUC_MAGSA (Zinc import ATP-binding protein znuC OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=znuC PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.399e-16
Identity = 56/187 (29.95%), Postives = 98/187 (52.41%), Query Frame = 3
Query:   24 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV--LPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAIS----EYKGTVITVSHDRYFV 566
            S++ +  +   +   L+ +R +LT++ G    ++GPNG GKS+LLK+ +GL +P  G V  G   +  +P   +  +   L + + +   VAE     R+++   L+G       +L R+V  LSGGE  R+   + +++   LLVLDEP   +D+  +  L + I+    E+   V+ VSHD + V
Sbjct:    2 SLLNLSGVRLSHGGHLVLDRVDLTVDAGRIITVVGPNGAGKSSLLKVALGLLRPDAGTVERGAKVIGYVPQRLDIGRLLPLSVRRFLAMAVAERPPAGRLEETLDLVG----AGHVLGRQVVDLSGGEMQRVLLARALLRRPDLLVLDEPVGGVDVAGQAELYDLITGQAREHGVGVLMVSHDLHVV 184          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: ZNUC_AERHH (Zinc import ATP-binding protein znuC OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=znuC PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.399e-16
Identity = 58/187 (31.02%), Postives = 100/187 (53.48%), Query Frame = 3
Query:   27 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETV---AEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD----IPFKEMLEEAISEYKGTVITVSHDRYFV 566
            +V +K +   ++ R + ++ + T+ +G+ T ++GPNG GKSTL KL++GL  P  G++     ++   Y  Q     L LD T+  TV    +  ++ R+  I+  L R   + D+LD ++  LSGGE  R+   + ++    LLVLDEP   +D    I    ++ +  +E+   V+ VSHD + V
Sbjct:    4 LVELKEVCLSFDGRSVLDKVSFTLNKGKITTLVGPNGAGKSTLSKLVLGLLTPDSGQI-TRSRDLRVGYVPQR----LYLDPTLPLTVRRFLQLGKNGRL-SIEEALNRVGAE-DLLDNRMQKLSGGEMQRVLLARALLVKPELLVLDEPVQGVDINGQIELYALISQLAAEFNCAVLMVSHDLHLV 183          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: SSUB1_NOCFA (Aliphatic sulfonates import ATP-binding protein ssuB 1 OS=Nocardia farcinica GN=ssuB1 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.399e-16
Identity = 59/181 (32.60%), Postives = 93/181 (51.38%), Query Frame = 3
Query:   30 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLL-GEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKAD-MLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD----IPFKEMLEEAISEYKGTVITVSHD 554
            V+I  L   + D+ + +  +LTI RGE   ++GP+G GK+TLL+L+ GLE P  GEVL+ G    +       Q   L   K VL  V       R +   GL      + D   D+  + LSGGE  R A  + +V+   LL+LDEP   LD    +  ++++ + ++ ++  V+ V+HD
Sbjct:    8 VSITGLRKSFGDKTVLDGVDLTIRRGEFVVLLGPSGTGKTTLLRLLTGLEVPDAGEVLVPGRRTTV------YQEPRLIPSKRVLANVLVGLRRTRSNRAAGLAALAEVQLDGKADQWPATLSGGEAQRAALARALVREPELLLLDEPFAALDALTRLRMQDLVGDLVARHRPAVLMVTHD 182          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: SSUB3_PSE14 (Aliphatic sulfonates import ATP-binding protein ssuB 3 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=ssuB3 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.439e-16
Identity = 58/184 (31.52%), Postives = 96/184 (52.17%), Query Frame = 3
Query:   30 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQ-----NQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD----IPFKEMLEEAISEYKGTVITVSHD 554
            + ++NL+  +  R +    +L I  G+  AI+G +GCGKSTLL+L+ GL+KP  G++L G    L +  E       +A  L   K +       + DWR   ++ L       A+  +   + LSGG+K R+A  + ++    LL+LDEP   LD    I  ++++E+   +Y  TV+ V+HD
Sbjct:   17 LAVRNLKKAFGTREVLKDIDLHIPAGQFVAIVGRSGCGKSTLLRLLAGLDKPTEGQLLAGS-APLDDAREDTRLMFQEARLLPWKKIIDNVGLGLSGDWRAQALEAL--EAVGLAERANEWPAALSGGQKQRVALARALIHKPRLLLLDEPLGALDALTRIEMQQLIEKLWHQYGFTVLLVTHD 197          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: POTA_LAWIP (Spermidine/putrescine import ATP-binding protein potA OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=potA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.439e-16
Identity = 58/192 (30.21%), Postives = 99/192 (51.56%), Query Frame = 3
Query:   27 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAE------ALDLDKTVLETVA-----EAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKG----TVITVSHDR 557
            ++ +KN+   +ED    +  NL I  GE   ++GP+GCGK+T+L++I G E P  GE+L+   NV     E+ Q        AL    TV + VA     +     +++++     R     +  DR+ S LSGG++ R+A  + +V    LL+LDEP + LD   +++++  I   +     T + V+HD+
Sbjct:    7 IIELKNVSKIFEDTCALDNINLQIANGEFLTLLGPSGCGKTTILRIISGFETPDVGEILIAGVNVSGFPPERRQVNTVFQHYALFPHMTVRDNVAFGLRMQKCPREKVNELVFEALRMVHLENFADRRPSQLSGGQQQRVAIARAVVNKPLLLLLDEPFSALDHKLRQIMQLEIKHLQRKLGITFVFVTHDQ 198          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: FBPC_PHOPR (Fe(3+) ions import ATP-binding protein fbpC OS=Photobacterium profundum GN=fbpC PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.439e-16
Identity = 58/195 (29.74%), Postives = 101/195 (51.79%), Query Frame = 3
Query:   30 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN------QAEALDLDKTVLETVA--------EAAE-DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISE----YKGTVITVSHDR 557
            V +KN+   + D  + N  +L I++G    ++GP+GCGK+T+L+L+ GLEKP  G++ +   +V     +Q       Q+ AL    ++ + V          AAE   R+DD   L+      + M DR V  +SGG++ R+A  + +V    +L+ DEP ++LD   +  + E I +    +  T + V+HD+
Sbjct:    7 VVLKNVCKRFGDNTVINNLDLEIKKGSLVTLLGPSGCGKTTVLRLVAGLEKPTSGQIFIDGEDVTNTSIQQRDICMVFQSYALFPHLSLYDNVGYGLKMLKLPAAEIKQRVDDALKLVD----LSGMGDRFVDQISGGQQQRIALARALVLKPKVLLFDEPLSNLDANLRRSMRETIRDLQQRFNITSLYVTHDQ 197          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: CBIO2_STAAW (Cobalt import ATP-binding protein cbiO 2 OS=Staphylococcus aureus (strain MW2) GN=cbiO2 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.439e-16
Identity = 57/197 (28.93%), Postives = 104/197 (52.79%), Query Frame = 3
Query:   24 SVVTIKNLEFGYEDRLLFNRANLT--IERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQ---------NQAEALDLDKTVLETVAEAAEDWRI--DDIKGLLGRCNFKADMLDR---KVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAI----SEYKGTVITVSHD 554
            SV+  KN+ F Y+    F   +++  I +G+ T+I+G NG GKST+ KL++G+EK + GE+      +  + FE+            +   +   V   VA   E+  +  D++   +G    + DML+R   + + LSGG+K R+A    +    ++++LDE T+ LD   ++ L + +    SE+  T+I+++HD
Sbjct:    6 SVIVFKNVSFQYQSDASFTLKDVSFSIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQTITDDNFEKLRKDIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPHDEMHRRVGEALKQVDMLERADYEPNALSGGQKQRVAIASVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHD 202          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: CBIO2_STAAS (Cobalt import ATP-binding protein cbiO 2 OS=Staphylococcus aureus (strain MSSA476) GN=cbiO2 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.439e-16
Identity = 57/197 (28.93%), Postives = 104/197 (52.79%), Query Frame = 3
Query:   24 SVVTIKNLEFGYEDRLLFNRANLT--IERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQ---------NQAEALDLDKTVLETVAEAAEDWRI--DDIKGLLGRCNFKADMLDR---KVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAI----SEYKGTVITVSHD 554
            SV+  KN+ F Y+    F   +++  I +G+ T+I+G NG GKST+ KL++G+EK + GE+      +  + FE+            +   +   V   VA   E+  +  D++   +G    + DML+R   + + LSGG+K R+A    +    ++++LDE T+ LD   ++ L + +    SE+  T+I+++HD
Sbjct:    6 SVIVFKNVSFQYQSDASFTLKDVSFSIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQTITDDNFEKLRKDIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPHDEMHRRVGEALKQVDMLERADYEPNALSGGQKQRVAIASVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHD 202          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: SSUB_PSEPF (Aliphatic sulfonates import ATP-binding protein ssuB OS=Pseudomonas fluorescens (strain Pf0-1) GN=ssuB PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.572e-16
Identity = 57/191 (29.84%), Postives = 98/191 (51.31%), Query Frame = 3
Query:    9 PRSGRSV-VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQ----NQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD----IPFKEMLEEAISEYKGTVITVSHD 554
            PR  R + + ++NL+  +  R +    +L I  G+  A++G +GCGKSTLL+L+ GL++P GG++L G   +     +      +A  L   K +         +WR   ++ L       AD  +   + LSGG+K R+A  + ++    LL+LDEP   LD    I  ++++E    ++  TV+ V+HD
Sbjct:    7 PRLLRGIPLAVRNLQKTFGSRQVLRGIDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLDQPTGGDLLAGSAPLTDARDDTRLMFQEARLLPWKKIIDNVGLGLKGNWRAQALQAL--DAVGLADRANEWPAALSGGQKQRVALARALIHQPRLLLLDEPLGALDALTRIEMQQLIERLWQQHGFTVLLVTHD 195          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: POTA_SPICI (Spermidine/putrescine import ATP-binding protein potA OS=Spiroplasma citri GN=potA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.572e-16
Identity = 57/199 (28.64%), Postives = 102/199 (51.26%), Query Frame = 3
Query:   24 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVL-LGE-------HNVLPNYFEQNQAEALDLDKTVLETVAEAAE---------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKG----TVITVSHDR 557
            +++ ++N+   Y+ +++    NL I+ GE   ++GP+GCGK+T L++I G E+P  GE+L LG+       H    N   QN   AL    TV + +A   +         +  +     L+G   F+    D+ V  LSGG++ R+A  + ++    +L+LDEP   LD+  ++ ++  +   +G    T I V+HD+
Sbjct:    4 NILELRNISKQYDGKVVLKGINLNIKEGEFVTLLGPSGCGKTTTLRIIAGFEQPNSGELLFLGKDYLKTPVHKREVNTVFQNY--ALFPHLTVFDNIAYGLKVKRNKYDVIETEVKKFLQLVGLEGFE----DKSVEQLSGGQRQRVALARALINKPRVLLLDEPMAALDVKLRKKMQAELKALQGEIGITFILVTHDQ 196          
The following BLAST results are available for this feature:
BLAST of EY728236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ZNUC_MAGSA3.399e-1629.95Zinc import ATP-binding protein znuC OS=Magnetospi... [more]
ZNUC_AERHH3.399e-1631.02Zinc import ATP-binding protein znuC OS=Aeromonas ... [more]
SSUB1_NOCFA3.399e-1632.60Aliphatic sulfonates import ATP-binding protein ss... [more]
SSUB3_PSE144.439e-1631.52Aliphatic sulfonates import ATP-binding protein ss... [more]
POTA_LAWIP4.439e-1630.21Spermidine/putrescine import ATP-binding protein p... [more]
FBPC_PHOPR4.439e-1629.74Fe(3+) ions import ATP-binding protein fbpC OS=Pho... [more]
CBIO2_STAAW4.439e-1628.93Cobalt import ATP-binding protein cbiO 2 OS=Staphy... [more]
CBIO2_STAAS4.439e-1628.93Cobalt import ATP-binding protein cbiO 2 OS=Staphy... [more]
SSUB_PSEPF7.572e-1629.84Aliphatic sulfonates import ATP-binding protein ss... [more]
POTA_SPICI7.572e-1628.64Spermidine/putrescine import ATP-binding protein p... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-001-C03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728236 ID=EY728236; Name=EY728236; organism=Citrus sinensis; type=EST; length=892bp
CCACGCGTCCGAGAAGTGGTAGATCTGTTGTAACAATTAAGAACCTGGAA
TTTGGATACGAGGATAGACTTCTGTTTAATCGAGCAAATCTCACAATTGA
AAGGGGAGAGAAAACTGCCATCATTGGCCCAAATGGTTGTGGTAAGAGTA
CTTTGCTGAAATTGATAATGGGTTTAGAGAAGCCAAGAGGAGGTGAAGTT
CTGCTTGGTGAGCATAATGTCCTACCAAACTATTTTGAGCAGAATCAGGC
TGAGGCACTTGATTTGGACAAAACAGTACTTGAGACAGTAGCAGAAGCTG
CAGAGGACTGGAGAATTGATGATATAAAGGGCCTCCTTGGTCGTTGTAAT
TTCAAAGCTGACATGCTTGATAGAAAGGTTTCCCTTTTGAGTGGTGGTGA
GAAGGCACGTCTTGCATTTTGCAAATTCATGGTAAAACCATCAACTCTTC
TAGTTTTGGATGAACCAACTAATCACTTGGATATTCCTTTCAAAGAGATG
CTCGAGGAGGCCATATCAGAGTACAAGGGCACAGTAATCACAGTTTCTCA
TGACCGATACTTCGTAAAGCAAATAGTAATAGAGTAGTGGAGGTTAAAGG
CAGCAATTTACAGGACTATGCTTGTGATTACAATTATTACCTAGAGAAAA
ACCTCCATGCTCGGGAAAGGGACCTTGAACGTGAGGCAGAGCTCCAAGAA
AAGGCTTCCAAAAATCAAGGCCAATCCNAGATGTCAAAGGCTGAGAAGGA
AGCTCGGAAGAAACAGAAATGCAGGCCTTTCAAGCAGCGAAACAAAATCA
AAAGGCTCGAAGATGGCAAAAATGGAAATGAAAGATAACCCGTATATATG
CGAAGGAAATCCATTGTACCTAATTTGCTGAGCAAATTCAGG
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