EY728236

Overview
NameEY728236
Unique NameEY728236
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: POTA_MESFL (Spermidine/putrescine import ATP-binding protein potA OS=Mesoplasma florum GN=potA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.572e-16
Identity = 54/199 (27.14%), Postives = 99/199 (49.75%), Query Frame = 3
Query:   24 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADML-----------------DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAIS----EYKGTVITVSHDR 557
            +++ ++N+   Y+ +++    +L I+ GE   ++GP+GCGK+T L+++ G EKP  G+++    ++LP    + Q        T+ ++ A        D+I   L     K D+L                 DR ++ LSGG+K R+A  + +V    +L+LDEP   LD+  ++ + E +     E   T + VSHD+
Sbjct:    4 NILELRNVTKDYDGKVVLKGIDLNIKEGEFITLLGPSGCGKTTTLRIVAGFEKPNSGQIMFEGKDLLPIPINKRQF------NTIFQSYALFPHLNVFDNIAFGLRTKKTKKDILQREVLKQIRQVGLEGFEDRNINDLSGGQKQRVAIARALVMKPKVLLLDEPLAALDVQLRQHMREELKRLQREIGITFLMVSHDQ 196          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: EF3_PNECA (Elongation factor 3 OS=Pneumocystis carinii GN=TEF3 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.572e-16
Identity = 63/185 (34.05%), Postives = 95/185 (51.35%), Query Frame = 3
Query:   42 NLEFG--YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAE---AAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAI-SEYKGTVITVSHDRYFVKQIV 578
            N EF   Y  ++L NR +L ++RG +  + GPNG GKSTLL+ I   +       L G    L   + ++  +  +   +V + +A         + + I  LL   +F  DML   +S LSGG K +LA  + M++   +L+LDEPTNHLD+     LE  + S+   T I VSHD  F+  +V
Sbjct:  432 NCEFSLAYGAKILLNRTSLNLKRGYRYGLCGPNGSGKSTLLRSIFNGQ-------LEGFPTELKTAYVEHDIDDTESKTSVFDFIANDPSVVVKNKQEVISSLLEH-SFTEDMLSIPISNLSGGWKMKLALVRAMLRQVDILLLDEPTNHLDVKNVAWLENFLTSQTHITSIIVSHDSKFLDNVV 608          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: ZNUC_JANSC (Zinc import ATP-binding protein znuC OS=Jannaschia sp. (strain CCS1) GN=znuC PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.890e-16
Identity = 59/185 (31.89%), Postives = 91/185 (49.19%), Query Frame = 3
Query:   24 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIP----FKEMLEEAISEYKGTVITVSHDRYFV 566
            S++T++NL   Y    +     LT+E GE   I+GPNG GK++LLK I+G  +P  G+V L    +   Y  Q       L  TV   +   A   R D +  L  +     D+L R++S LSGG+  R+   + ++    +L+LDE T  LD P    F   +E+   E    V+ +SH+ + V
Sbjct:    2 SLITVENLSVRYGANTVLRNVALTVEPGEIVTIVGPNGSGKTSLLKAIIGAARPAAGQVTL-RPGLRIGYVPQRLHIDATLPITVERFMGLTARVTREDCMAAL--KIAAVPDLLKRQMSQLSGGQFQRVLLARALINKPDVLLLDEATQGLDQPGSAAFYRQIEDVRRETGCAVLMISHELHVV 183          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: POTA_HAEIN (Spermidine/putrescine import ATP-binding protein potA OS=Haemophilus influenzae GN=potA PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 9.890e-16
Identity = 56/194 (28.87%), Postives = 103/194 (53.09%), Query Frame = 3
Query:   21 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN------QAEALDLDKTVLETVAEAAEDWRI--DDIKGLL---GRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKG----TVITVSHDR 557
            + ++ +++++  Y    + N  NLTI  GE   I+GP+GCGK+T+L+L+ GLE+   G ++L   ++     E+       Q+ AL    T+ E VA      ++  ++IK  +    R     +M DRK + LSGG++ R+A  + +V    +L+LDE  + LD   ++ +++ +   +     T I V+HD+
Sbjct:    8 KPIIELRSIKKSYGSNTIINDFNLTINNGEFVTILGPSGCGKTTVLRLLAGLEELDSGSIILDGEDITNVPAEKRHINTVFQSYALFPHMTIFENVAFGLRMQKVPNEEIKPRVLEALRMVQLEEMADRKPTQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQQELKMLQRQLGITFIFVTHDQ 201          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: NEW1_YEAST ([NU+] prion formation protein 1 OS=Saccharomyces cerevisiae GN=NEW1 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.292e-15
Identity = 59/187 (31.55%), Postives = 93/187 (49.73%), Query Frame = 3
Query:   30 VTIKNLEFG--YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN--QAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKG-TVITVSHDRYFVKQI 575
            + I N +F   Y  R+L N+ NL + +G +  + G NG GKSTL++ I       G      + + L   F ++  Q E  DLD      + E  +    ++I   L    F  +   + V  LSGG K +L   + M++ + +L+LDEPTNHLD+   + LEE + E+   T + VSHD  F+  +
Sbjct:  570 IEIVNTDFSLAYGSRMLLNKTNLRLLKGHRYGLCGRNGAGKSTLMRAIAN-----GQLDGFPDKDTLRTCFVEHKLQGEEGDLDLVSFIALDEELQSTSREEIAAALESVGFDEERRAQTVGSLSGGWKMKLELARAMLQKADILLLDEPTNHLDVSNVKWLEEYLLEHTDITSLIVSHDSGFLDTV 751          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: EF3_CANGA (Elongation factor 3 OS=Candida glabrata GN=TEF3 PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.292e-15
Identity = 58/185 (31.35%), Postives = 92/185 (49.73%), Query Frame = 3
Query:   42 NLEFG--YEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIM-----GLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFVKQI 575
            N EF   Y  ++L N+  L ++RG +  + GPNG GKSTL++ I      G   P     +  EH++          +    D +VL+ V  ++E    + I   L    F  +M++  +S LSGG K +LA  + ++K + +L+LDEPTNHLD      L   ++    T + VSHD  F+  +
Sbjct:  433 NCEFSLAYGAKILLNKTQLRLKRGRRYGLCGPNGAGKSTLMRAIANGQVDGFPTPEECMTVYVEHDI----------DGTHADTSVLDFVV-SSEVGTKEAITAKLVEFGFTEEMINMPISSLSGGWKMKLALARAVLKNADILLLDEPTNHLDTVNVAWLVNYLNTCGITSVIVSHDSGFLDNV 606          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: ZNUC_VIBPA (Zinc import ATP-binding protein znuC OS=Vibrio parahaemolyticus GN=znuC PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.687e-15
Identity = 54/188 (28.72%), Postives = 103/188 (54.79%), Query Frame = 3
Query:   24 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEH---NVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD----IPFKEMLEEAISEYKGTVITVSHDRYFV 566
            S+V+++ L   ++DR + +  ++ +E+G+ T +IGPNG GKSTL+K+I+GL+KP  G+++  +      +P   + N +  L++ +  L    + ++   +D ++ L+G       ++   +  LSGGE  R+   + +++   LLVLDEP   +D    I   +++E     +   V  VSHD + V
Sbjct:    3 SLVSLEQLCVEFDDRRVLDNISMELEKGKITTLIGPNGAGKSTLVKVILGLQKPTSGKLVKAKKLKIGYVPQKLKLNDSLPLNVIR-FLNLAGKYSKQECLDALR-LVG----AEHLIKSNMHRLSGGENQRVLLARALLQRPDLLVLDEPAQGVDVQGQIDLYDLIESIRHRFDCAVFMVSHDLHLV 184          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: ZNUC_BUCBP (Zinc import ATP-binding protein znuC OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=znuC PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.687e-15
Identity = 56/182 (30.77%), Postives = 96/182 (52.75%), Query Frame = 3
Query:   30 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDD---IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD----IPFKEMLEEAISEYKGTVITVSHD 554
            + + N+   + +R + +  +L +       +IGPNG GKSTL+++I+GL KP  G++   ++N+   Y  Q     L+L  T+  TV         +D   I+G+L R N    +    +  LSGGE  ++   + ++K   LLVLDEPT  +D    I F +++ +  +E K +++ VSHD
Sbjct:    5 IQLNNISVNFNNRSILSNISLALTPNCILTLIGPNGAGKSTLVRVILGLLKPNQGKIFF-KNNLRIGYIPQK----LNLHSTLPITVNRFMNLSYFNDKNYIQGMLSRINI-IHLKHHPLQKLSGGEMQKVLLARALLKKPELLVLDEPTQGIDIIGKIAFYKLVNQIKNELKCSILMVSHD 180          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: YXEO_BACSU (Probable amino-acid import ATP-binding protein yxeO OS=Bacillus subtilis GN=yxeO PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.687e-15
Identity = 60/206 (29.13%), Postives = 108/206 (52.43%), Query Frame = 3
Query:   27 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALD-------------LDKTVLETVAEA---AEDWRIDDIKGLLGRCNFKADMLDRKVS----LLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD---IPFKEMLEEAISEYKGTVITVSHDRYFVKQI 575
            ++T+KN+   ++D ++ +  +L ++RGE  AIIGP+G GKSTLL+ +  LE+P  G + +GE  +    F + +A  L               +KT L+ + EA   A+    D+ K  +G    K   L+ K       +SGG++ R+   + +      ++LDEPT+ LD   +     + ++I+E + T+I V+H+  F K++
Sbjct:    1 MITVKNIRKAFKDLVVLDGIDLEVKRGEVVAIIGPSGSGKSTLLRCLNLLERPDQGLIEIGEAKLNAEKFTRKEAHRLRQQTAMVFQNYNLFKNKTALQNITEALIVAQHKPRDEAK-RIGMEILKQVGLEHKADSYPITMSGGQQQRIGIARALAVNPHAILLDEPTSALDPELVTGVLQVIKSIAEKQTTMIIVTHEMAFAKEV 205          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: POTG_ECOLI (Putrescine transport ATP-binding protein potG OS=Escherichia coli (strain K12) GN=potG PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.687e-15
Identity = 59/201 (29.35%), Postives = 101/201 (50.25%), Query Frame = 3
Query:   27 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLG--EHNVLPNYF------------------EQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLE----EAISEYKGTVITVSHDR 557
            ++ I+NL   Y+ +   +  +LTI +GE  A++G +GCGKSTLL+++ G E+P  G+++L   + + +P Y                   EQN A  L  DK     +A      R++++ GL+    F      RK   LSGG++ R+A  + + K   LL+LDEP   LD   ++ ++    + +     T + V+HD+
Sbjct:   19 LLEIRNLTKSYDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPSAGQIMLDGVDLSQVPPYLRPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIAS-----RVNEMLGLVHMQEF----AKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQ 210          
The following BLAST results are available for this feature:
BLAST of EY728236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
POTA_MESFL7.572e-1627.14Spermidine/putrescine import ATP-binding protein p... [more]
EF3_PNECA7.572e-1634.05Elongation factor 3 OS=Pneumocystis carinii GN=TEF... [more]
ZNUC_JANSC9.890e-1631.89Zinc import ATP-binding protein znuC OS=Jannaschia... [more]
POTA_HAEIN9.890e-1628.87Spermidine/putrescine import ATP-binding protein p... [more]
NEW1_YEAST1.292e-1531.55[NU+] prion formation protein 1 OS=Saccharomyces c... [more]
EF3_CANGA1.292e-1531.35Elongation factor 3 OS=Candida glabrata GN=TEF3 PE... [more]
ZNUC_VIBPA1.687e-1528.72Zinc import ATP-binding protein znuC OS=Vibrio par... [more]
ZNUC_BUCBP1.687e-1530.77Zinc import ATP-binding protein znuC OS=Buchnera a... [more]
YXEO_BACSU1.687e-1529.13Probable amino-acid import ATP-binding protein yxe... [more]
POTG_ECOLI1.687e-1529.35Putrescine transport ATP-binding protein potG OS=E... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-001-C03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728236 ID=EY728236; Name=EY728236; organism=Citrus sinensis; type=EST; length=892bp
CCACGCGTCCGAGAAGTGGTAGATCTGTTGTAACAATTAAGAACCTGGAA
TTTGGATACGAGGATAGACTTCTGTTTAATCGAGCAAATCTCACAATTGA
AAGGGGAGAGAAAACTGCCATCATTGGCCCAAATGGTTGTGGTAAGAGTA
CTTTGCTGAAATTGATAATGGGTTTAGAGAAGCCAAGAGGAGGTGAAGTT
CTGCTTGGTGAGCATAATGTCCTACCAAACTATTTTGAGCAGAATCAGGC
TGAGGCACTTGATTTGGACAAAACAGTACTTGAGACAGTAGCAGAAGCTG
CAGAGGACTGGAGAATTGATGATATAAAGGGCCTCCTTGGTCGTTGTAAT
TTCAAAGCTGACATGCTTGATAGAAAGGTTTCCCTTTTGAGTGGTGGTGA
GAAGGCACGTCTTGCATTTTGCAAATTCATGGTAAAACCATCAACTCTTC
TAGTTTTGGATGAACCAACTAATCACTTGGATATTCCTTTCAAAGAGATG
CTCGAGGAGGCCATATCAGAGTACAAGGGCACAGTAATCACAGTTTCTCA
TGACCGATACTTCGTAAAGCAAATAGTAATAGAGTAGTGGAGGTTAAAGG
CAGCAATTTACAGGACTATGCTTGTGATTACAATTATTACCTAGAGAAAA
ACCTCCATGCTCGGGAAAGGGACCTTGAACGTGAGGCAGAGCTCCAAGAA
AAGGCTTCCAAAAATCAAGGCCAATCCNAGATGTCAAAGGCTGAGAAGGA
AGCTCGGAAGAAACAGAAATGCAGGCCTTTCAAGCAGCGAAACAAAATCA
AAAGGCTCGAAGATGGCAAAAATGGAAATGAAAGATAACCCGTATATATG
CGAAGGAAATCCATTGTACCTAATTTGCTGAGCAAATTCAGG
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