EY728233

Overview
NameEY728233
Unique NameEY728233
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length631
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11717 contig Csv1_Contig11717:1..631. BLAST: Citrus Unigene V1 Contigs to Populus V2 proteins
Homology
[Close]
BLAST of EY728233 vs. ExPASy Swiss-Prot
Match: HSCB_ECOLI (Co-chaperone protein hscB OS=Escherichia coli (strain K12) GN=hscB PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.967e-22
Identity = 62/169 (36.69%), Postives = 99/169 (58.58%), Query Frame = 3 
Query:   33 HFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLNEAYQTLKNPPKRARYLLAMGGRELPLEV-TVQDPDFLMQQMQWRXXXXXXXXXXXXXGVAVFKRRLKVAQDELNESFAACWDDAAQREQAERLMRRMQFLDKLTYEVRQLEERLDD 536
            +F LF L   ++LD + L+ R+++L R  HPD+FA  S+ EQ  A++QSA++N+A+QTL++P  RA YLL++ G +L  E  TV+D  FLM+Q++ R              +  F +R+K   D  ++      D+    + A   +R+++FLDKL     QLEE+L D
Sbjct:    3 YFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLDNETW-DAAADTVRKLRFLDKLRSSAEQLEEKLLD 170
[Close]
BLAST of EY728233 vs. ExPASy Swiss-Prot
Match: HSCB_ECOLC (Co-chaperone protein hscB OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=hscB PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.967e-22
Identity = 62/169 (36.69%), Postives = 99/169 (58.58%), Query Frame = 3 
Query:   33 HFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLNEAYQTLKNPPKRARYLLAMGGRELPLEV-TVQDPDFLMQQMQWRXXXXXXXXXXXXXGVAVFKRRLKVAQDELNESFAACWDDAAQREQAERLMRRMQFLDKLTYEVRQLEERLDD 536
            +F LF L   ++LD + L+ R+++L R  HPD+FA  S+ EQ  A++QSA++N+A+QTL++P  RA YLL++ G +L  E  TV+D  FLM+Q++ R              +  F +R+K   D  ++      D+    + A   +R+++FLDKL     QLEE+L D
Sbjct:    3 YFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLDNETW-DAAADTVRKLRFLDKLRSSAEQLEEKLLD 170
[Close]
BLAST of EY728233 vs. ExPASy Swiss-Prot
Match: HSCB_ECOL6 (Co-chaperone protein hscB OS=Escherichia coli O6 GN=hscB PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.967e-22
Identity = 62/169 (36.69%), Postives = 99/169 (58.58%), Query Frame = 3 
Query:   33 HFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLNEAYQTLKNPPKRARYLLAMGGRELPLEV-TVQDPDFLMQQMQWRXXXXXXXXXXXXXGVAVFKRRLKVAQDELNESFAACWDDAAQREQAERLMRRMQFLDKLTYEVRQLEERLDD 536
            +F LF L   ++LD + L+ R+++L R  HPD+FA  S+ EQ  A++QSA++N+A+QTL++P  RA YLL++ G +L  E  TV+D  FLM+Q++ R              +  F +R+K   D  ++      D+    + A   +R+++FLDKL     QLEE+L D
Sbjct:    3 YFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLDNETW-DAAADTVRKLRFLDKLRSSAEQLEEKLLD 170
[Close]
BLAST of EY728233 vs. ExPASy Swiss-Prot
Match: HSCB_ECOL5 (Co-chaperone protein hscB OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=hscB PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.967e-22
Identity = 62/169 (36.69%), Postives = 99/169 (58.58%), Query Frame = 3 
Query:   33 HFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLNEAYQTLKNPPKRARYLLAMGGRELPLEV-TVQDPDFLMQQMQWRXXXXXXXXXXXXXGVAVFKRRLKVAQDELNESFAACWDDAAQREQAERLMRRMQFLDKLTYEVRQLEERLDD 536
            +F LF L   ++LD + L+ R+++L R  HPD+FA  S+ EQ  A++QSA++N+A+QTL++P  RA YLL++ G +L  E  TV+D  FLM+Q++ R              +  F +R+K   D  ++      D+    + A   +R+++FLDKL     QLEE+L D
Sbjct:    3 YFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLDNETW-DAAADTVRKLRFLDKLRSSAEQLEEKLLD 170
[Close]
BLAST of EY728233 vs. ExPASy Swiss-Prot
Match: HSCB_ECOK1 (Co-chaperone protein hscB OS=Escherichia coli O1:K1 / APEC GN=hscB PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.967e-22
Identity = 62/169 (36.69%), Postives = 99/169 (58.58%), Query Frame = 3 
Query:   33 HFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLNEAYQTLKNPPKRARYLLAMGGRELPLEV-TVQDPDFLMQQMQWRXXXXXXXXXXXXXGVAVFKRRLKVAQDELNESFAACWDDAAQREQAERLMRRMQFLDKLTYEVRQLEERLDD 536
            +F LF L   ++LD + L+ R+++L R  HPD+FA  S+ EQ  A++QSA++N+A+QTL++P  RA YLL++ G +L  E  TV+D  FLM+Q++ R              +  F +R+K   D  ++      D+    + A   +R+++FLDKL     QLEE+L D
Sbjct:    3 YFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLDNETW-DAAADTVRKLRFLDKLRSSAEQLEEKLLD 170
[Close]
BLAST of EY728233 vs. ExPASy Swiss-Prot
Match: HSCB_ECOHS (Co-chaperone protein hscB OS=Escherichia coli O9:H4 (strain HS) GN=hscB PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.967e-22
Identity = 62/169 (36.69%), Postives = 99/169 (58.58%), Query Frame = 3 
Query:   33 HFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLNEAYQTLKNPPKRARYLLAMGGRELPLEV-TVQDPDFLMQQMQWRXXXXXXXXXXXXXGVAVFKRRLKVAQDELNESFAACWDDAAQREQAERLMRRMQFLDKLTYEVRQLEERLDD 536
            +F LF L   ++LD + L+ R+++L R  HPD+FA  S+ EQ  A++QSA++N+A+QTL++P  RA YLL++ G +L  E  TV+D  FLM+Q++ R              +  F +R+K   D  ++      D+    + A   +R+++FLDKL     QLEE+L D
Sbjct:    3 YFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLDNETW-DAAADTVRKLRFLDKLRSSAEQLEEKLLD 170
[Close]
BLAST of EY728233 vs. ExPASy Swiss-Prot
Match: HSCB_ECODH (Co-chaperone protein hscB OS=Escherichia coli (strain K12 / DH10B) GN=hscB PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.967e-22
Identity = 62/169 (36.69%), Postives = 99/169 (58.58%), Query Frame = 3 
Query:   33 HFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLNEAYQTLKNPPKRARYLLAMGGRELPLEV-TVQDPDFLMQQMQWRXXXXXXXXXXXXXGVAVFKRRLKVAQDELNESFAACWDDAAQREQAERLMRRMQFLDKLTYEVRQLEERLDD 536
            +F LF L   ++LD + L+ R+++L R  HPD+FA  S+ EQ  A++QSA++N+A+QTL++P  RA YLL++ G +L  E  TV+D  FLM+Q++ R              +  F +R+K   D  ++      D+    + A   +R+++FLDKL     QLEE+L D
Sbjct:    3 YFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLDNETW-DAAADTVRKLRFLDKLRSSAEQLEEKLLD 170
[Close]
BLAST of EY728233 vs. ExPASy Swiss-Prot
Match: HSCB_ECOBW (Co-chaperone protein hscB OS=Escherichia coli (strain K12 / BW2952) GN=hscB PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.967e-22
Identity = 62/169 (36.69%), Postives = 99/169 (58.58%), Query Frame = 3 
Query:   33 HFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLNEAYQTLKNPPKRARYLLAMGGRELPLEV-TVQDPDFLMQQMQWRXXXXXXXXXXXXXGVAVFKRRLKVAQDELNESFAACWDDAAQREQAERLMRRMQFLDKLTYEVRQLEERLDD 536
            +F LF L   ++LD + L+ R+++L R  HPD+FA  S+ EQ  A++QSA++N+A+QTL++P  RA YLL++ G +L  E  TV+D  FLM+Q++ R              +  F +R+K   D  ++      D+    + A   +R+++FLDKL     QLEE+L D
Sbjct:    3 YFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLDNETW-DAAADTVRKLRFLDKLRSSAEQLEEKLLD 170
[Close]
BLAST of EY728233 vs. ExPASy Swiss-Prot
Match: HSCB_ECO81 (Co-chaperone protein hscB OS=Escherichia coli O81 (strain ED1a) GN=hscB PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.967e-22
Identity = 62/169 (36.69%), Postives = 99/169 (58.58%), Query Frame = 3 
Query:   33 HFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLNEAYQTLKNPPKRARYLLAMGGRELPLEV-TVQDPDFLMQQMQWRXXXXXXXXXXXXXGVAVFKRRLKVAQDELNESFAACWDDAAQREQAERLMRRMQFLDKLTYEVRQLEERLDD 536
            +F LF L   ++LD + L+ R+++L R  HPD+FA  S+ EQ  A++QSA++N+A+QTL++P  RA YLL++ G +L  E  TV+D  FLM+Q++ R              +  F +R+K   D  ++      D+    + A   +R+++FLDKL     QLEE+L D
Sbjct:    3 YFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLDNETW-DAAADTVRKLRFLDKLRSSAEQLEEKLLD 170
[Close]
BLAST of EY728233 vs. ExPASy Swiss-Prot
Match: HSCB_ECO7I (Co-chaperone protein hscB OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=hscB PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.967e-22
Identity = 62/169 (36.69%), Postives = 99/169 (58.58%), Query Frame = 3 
Query:   33 HFALFELQPSFRLDLEQLATRYRELARGVHPDRFADASEREQRLALEQSASLNEAYQTLKNPPKRARYLLAMGGRELPLEV-TVQDPDFLMQQMQWRXXXXXXXXXXXXXGVAVFKRRLKVAQDELNESFAACWDDAAQREQAERLMRRMQFLDKLTYEVRQLEERLDD 536
            +F LF L   ++LD + L+ R+++L R  HPD+FA  S+ EQ  A++QSA++N+A+QTL++P  RA YLL++ G +L  E  TV+D  FLM+Q++ R              +  F +R+K   D  ++      D+    + A   +R+++FLDKL     QLEE+L D
Sbjct:    3 YFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLDNETW-DAAADTVRKLRFLDKLRSSAEQLEEKLLD 170
The following BLAST results are available for this feature:
BLAST of EY728233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 149
Match NameE-valueIdentityDescription
HSCB_ECOLI2.967e-2236.69Co-chaperone protein hscB OS=Escherichia coli (str... [more]
HSCB_ECOLC2.967e-2236.69Co-chaperone protein hscB OS=Escherichia coli (str... [more]
HSCB_ECOL62.967e-2236.69Co-chaperone protein hscB OS=Escherichia coli O6 G... [more]
HSCB_ECOL52.967e-2236.69Co-chaperone protein hscB OS=Escherichia coli O6:K... [more]
HSCB_ECOK12.967e-2236.69Co-chaperone protein hscB OS=Escherichia coli O1:K... [more]
HSCB_ECOHS2.967e-2236.69Co-chaperone protein hscB OS=Escherichia coli O9:H... [more]
HSCB_ECODH2.967e-2236.69Co-chaperone protein hscB OS=Escherichia coli (str... [more]
HSCB_ECOBW2.967e-2236.69Co-chaperone protein hscB OS=Escherichia coli (str... [more]
HSCB_ECO812.967e-2236.69Co-chaperone protein hscB OS=Escherichia coli O81 ... [more]
HSCB_ECO7I2.967e-2236.69Co-chaperone protein hscB OS=Escherichia coli O7:K... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-001-B11-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728233 ID=EY728233; Name=EY728233; organism=Citrus sinensis; type=EST; length=631bp
AACATCTGAGGCTGATTGTGGGTACTCCTTGTCATTTCGCTTTATTCGAG
CTGCAGCCGAGTTTTCGACTGGACCTTGAACAGCTTGCCACGCGCTACCG
TGAACTGGCGCGTGGGGTGCATCCGGACCGCTTTGCTGACGCTTCCGAGC
GTGAGCAACGCTTGGCGCTGGAGCAATCAGCCAGCCTCAACGAAGCCTAT
CAGACGCTCAAGAACCCTCCCAAACGCGCGCGCTACCTGCTCGCCATGGG
CGGTCGCGAGCTGCCGCTTGAAGTCACGGTCCAGGACCCTGATTTCCTGA
TGCAGCAGATGCAATGGCGCGAGGAGCTCGAAGAACTGCAGGACGAGGCC
GATCTGGCCGGAGTCGCGGTCTTCAAGCGCCGTCTGAAAGTGGCCCAGGA
TGAACTCAACGAAAGCTTCGCAGCCTGTTGGGATGACGCAGCGCAACGTG
AGCAGGCCGAACGCCTGATGCGGCGCATGCAGTTCCTCGACAAGCTCACC
TACGAAGTGCGCCAGTTAGAAGAGCGCCTCGACGATTAACCCAGTGCCGC
CCCAGTTGCACGCCTGATATACAGATAAGTCCTGNATACCATGGCCCTAC
TGCAGATCGCCGAACCCGGTCAAAGTCCTCA
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