GE213255

Overview
NameGE213255
Unique NameGE213255
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length443
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 14331_ARATH (14-3-3-like protein GF14 chi OS=Arabidopsis thaliana GN=GRF1 PE=1 SV=3)

HSP 1 Score: 229.18 bits (583), Expect = 5.902e-60
Identity = 113/134 (84.33%), Postives = 124/134 (92.54%), Query Frame = 2
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YRSKIE ELS ICDGIL LL++ L+P+A+S +SKVFYLKMKGDYHRYLAEFK+G ERK+AAE TL AYK+AQDIA +ELAP HPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI+ELDTLGEESYKDST
Sbjct:   93 YRSKIETELSDICDGILKLLDTILVPAAASGDSKVFYLKMKGDYHRYLAEFKSGQERKDAAEHTLTAYKAAQDIANSELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDST 226          
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 14335_SOLLC (14-3-3 protein 5 OS=Solanum lycopersicum GN=TFT5 PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 7.709e-60
Identity = 114/135 (84.44%), Postives = 125/135 (92.59%), Query Frame = 2
Query:   20 RYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            +YRS+IENEL+ IC+GIL LL+S LI SA++ +SKVFYLKMKGDY+RYLAEFKTG ERKEAAE+TL AYKSAQDIA  ELAP HPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI+ELDTLGEESYKDST
Sbjct:   87 KYRSQIENELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYYRYLAEFKTGTERKEAAENTLSAYKSAQDIANGELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDST 221          
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 1433_CHLRE (14-3-3-like protein OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 1.717e-59
Identity = 111/135 (82.22%), Postives = 124/135 (91.85%), Query Frame = 2
Query:   20 RYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            +YR+ +E ELSKIC  IL LL+ HLIP+AS+ ESKVFYLKMKGDYHRYLAEFKTGA+RKEAAE TLLAYK+AQDIAL +L P HPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELD+LGEESYKDST
Sbjct:   87 KYRTVVEEELSKICASILQLLDDHLIPTASTGESKVFYLKMKGDYHRYLAEFKTGADRKEAAEHTLLAYKAAQDIALVDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLGEESYKDST 221          
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 1433B_HORVU (14-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 2.243e-59
Identity = 110/134 (82.09%), Postives = 126/134 (94.03%), Query Frame = 2
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YR KIE EL+KICDGIL LL+SHL+PS+++ ESKVFYLKMKGDY+RYLAEFK+G ERK+AAE+T++AYK+AQ+IALAEL P HPIRLGLALNFSVFYYEILNSPDRAC+LAKQAFDEAISELD+L EESYKDST
Sbjct:   92 YRGKIEVELTKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKSGTERKDAAENTMVAYKAAQEIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACDLAKQAFDEAISELDSLSEESYKDST 225          
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 14336_ARATH (14-3-3-like protein GF14 lambda OS=Arabidopsis thaliana GN=GRF6 PE=1 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 3.826e-59
Identity = 108/134 (80.60%), Postives = 124/134 (92.54%), Query Frame = 2
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YRSK+E+ELS +C GIL LL+SHLIPSA ++ESKVFYLKMKGDYHRY+AEFK+G ERK AAE T+LAYK+AQDIA A++AP HPIRLGLALNFSVFYYEILNS D+ACN+AKQAF+EAI+ELDTLGEESYKDST
Sbjct:   91 YRSKVESELSSVCSGILKLLDSHLIPSAGASESKVFYLKMKGDYHRYMAEFKSGDERKTAAEDTMLAYKAAQDIAAADMAPTHPIRLGLALNFSVFYYEILNSSDKACNMAKQAFEEAIAELDTLGEESYKDST 224          
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 14332_SOLTU (14-3-3-like protein RA215 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 3.826e-59
Identity = 112/135 (82.96%), Postives = 125/135 (92.59%), Query Frame = 2
Query:   20 RYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            +YRS+IENEL+ IC+GIL LL+S LI SA++ +SKVFYLKMKGDY+RYLAEFKTG ERKEAAE+TL AYKSAQDIA  ELAP HPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI+++DTLGEESYKDST
Sbjct:   86 KYRSQIENELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYYRYLAEFKTGTERKEAAENTLSAYKSAQDIANGELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIADVDTLGEESYKDST 220          
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 1433_HELAN (14-3-3-like protein OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 6.526e-59
Identity = 114/134 (85.07%), Postives = 123/134 (91.79%), Query Frame = 2
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YRSKIE+ELS ICDGIL +L+S LI SAS  +SKVFYLKMKGDY+RYLAEFKTG ERK AAE+TL AYK+AQDIA AELAP HPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI+ELDTLGE+SYKDST
Sbjct:   92 YRSKIESELSSICDGILKVLDSKLIGSASGGDSKVFYLKMKGDYYRYLAEFKTGDERKLAAENTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEDSYKDST 225          
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 1433A_TOBAC (14-3-3-like protein A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 8.523e-59
Identity = 113/134 (84.33%), Postives = 124/134 (92.54%), Query Frame = 2
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YRSKIE+EL+ IC+GIL LL+S LI +A++ +SKVFYLKMKGDY+RYLAEFKTGAERKEAAE+TL AYKSAQDIA  ELAP HPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI+EL TLGEESYKDST
Sbjct:   87 YRSKIESELTSICNGILKLLDSKLIGTAATGDSKVFYLKMKGDYYRYLAEFKTGAERKEAAENTLSAYKSAQDIANGELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELGTLGEESYKDST 220          
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 14338_ARATH (14-3-3-like protein GF14 kappa OS=Arabidopsis thaliana GN=GRF8 PE=2 SV=2)

HSP 1 Score: 224.172 bits (570), Expect = 1.899e-58
Identity = 107/134 (79.85%), Postives = 125/134 (93.28%), Query Frame = 2
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YRSK+E ELS IC GIL LL+SHLIPSA+++ESKVFYLKMKGDYHRYLAEFK+G ERK AAE T++AYK+AQD+A+A+LAP HPIRLGLALNFSVFYYEILNS ++AC++AKQAF+EAI+ELDTLGEESYKDST
Sbjct:   91 YRSKVETELSSICSGILRLLDSHLIPSATASESKVFYLKMKGDYHRYLAEFKSGDERKTAAEDTMIAYKAAQDVAVADLAPTHPIRLGLALNFSVFYYEILNSSEKACSMAKQAFEEAIAELDTLGEESYKDST 224          
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 14331_ORYSJ (14-3-3-like protein GF14-A OS=Oryza sativa subsp. japonica GN=GF14A PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.231e-57
Identity = 106/134 (79.10%), Postives = 123/134 (91.79%), Query Frame = 2
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YR+++E ELS IC GIL LL+  L+P+A++ ++KVFYLKMKGDYHRYLAEFKTGAERK+AA++TL AY++AQDIA+ EL+P HPIRLGLALNFSVFYYEILNSPDRAC LAKQAFDEAISELDTLGEESYKDST
Sbjct:   96 YRARVEAELSNICAGILRLLDERLVPAAAAVDAKVFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAISELDTLGEESYKDST 229          
The following BLAST results are available for this feature:
BLAST of GE213255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14331_ARATH5.902e-6084.3314-3-3-like protein GF14 chi OS=Arabidopsis thalia... [more]
14335_SOLLC7.709e-6084.4414-3-3 protein 5 OS=Solanum lycopersicum GN=TFT5 P... [more]
1433_CHLRE1.717e-5982.2214-3-3-like protein OS=Chlamydomonas reinhardtii P... [more]
1433B_HORVU2.243e-5982.0914-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1[more]
14336_ARATH3.826e-5980.6014-3-3-like protein GF14 lambda OS=Arabidopsis tha... [more]
14332_SOLTU3.826e-5982.9614-3-3-like protein RA215 OS=Solanum tuberosum PE=... [more]
1433_HELAN6.526e-5985.0714-3-3-like protein OS=Helianthus annuus PE=2 SV=1[more]
1433A_TOBAC8.523e-5984.3314-3-3-like protein A OS=Nicotiana tabacum PE=2 SV... [more]
14338_ARATH1.899e-5879.8514-3-3-like protein GF14 kappa OS=Arabidopsis thal... [more]
14331_ORYSJ1.231e-5779.1014-3-3-like protein GF14-A OS=Oryza sativa subsp. ... [more]

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Properties
Property NameValue
Genbank description105 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>GE213255 ID=GE213255; Name=GE213255; organism=Citrus sinensis; type=EST; length=443bp
ATTAGCGTGGTCGCGGCCGAGGTACAGGAGCAAGATTGAGAATGAGCTCA
GCAAGATCTGTGATGGGATTCTTAGCCTCCTTGAGTCTCATCTCATTCCC
TCTGCCTCATCGGCTGAGTCTAAGGTGTTCTACCTGAAGATGAAGGGTGA
TTACCACAGGTATTTGGCTGAGTTCAAGACTGGAGCTGAGAGGAAGGAAG
CTGCGGAGAGCACTTTGTTGGCCTACAAGTCAGCTCAGGATATTGCTTTA
GCTGAATTGGCCCCTGCTCACCCCATAAGGCTGGGACTTGCACTCAACTT
CTCTGTGTTCTACTATGAAATCCTTAACTCACCAGATCGTGCATGCAATC
TTGCGAAGCAGGCTTTTGATGAGGCCATTTCTGAGCTTGATACCTTGGGT
GAAGAATCATACAAGGACAGTACCTGCCCGGGCGGCCGCTCGA
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