GE213255

Overview
NameGE213255
Unique NameGE213255
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length443
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 1433T_XENLA (14-3-3 protein theta OS=Xenopus laevis GN=ywhaq PE=2 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 2.662e-44
Identity = 87/134 (64.93%), Postives = 106/134 (79.10%), Query Frame = 2 
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YR K+E+EL  IC  +L LL+ +LI +A++ ESKVFYLKMKGDY RYLAE   G +RK+  E++  AY+ A DI+  E+ P HPIRLGLALNFSVFYYEILN+P+ AC LAK AFDEAI+ELDTL E+SYKDST
Sbjct:   82 YREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDST 215
[Close]
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 1433T_RAT (14-3-3 protein theta OS=Rattus norvegicus GN=Ywhaq PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 2.662e-44
Identity = 87/134 (64.93%), Postives = 106/134 (79.10%), Query Frame = 2 
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YR K+E+EL  IC  +L LL+ +LI +A++ ESKVFYLKMKGDY RYLAE   G +RK+  E++  AY+ A DI+  E+ P HPIRLGLALNFSVFYYEILN+P+ AC LAK AFDEAI+ELDTL E+SYKDST
Sbjct:   82 YREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDST 215
[Close]
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 1433T_RABIT (14-3-3 protein theta OS=Oryctolagus cuniculus GN=YWHAQ PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 2.662e-44
Identity = 87/134 (64.93%), Postives = 106/134 (79.10%), Query Frame = 2 
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YR K+E+EL  IC  +L LL+ +LI +A++ ESKVFYLKMKGDY RYLAE   G +RK+  E++  AY+ A DI+  E+ P HPIRLGLALNFSVFYYEILN+P+ AC LAK AFDEAI+ELDTL E+SYKDST
Sbjct:   82 YREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDST 215
[Close]
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 1433T_MOUSE (14-3-3 protein theta OS=Mus musculus GN=Ywhaq PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 2.662e-44
Identity = 87/134 (64.93%), Postives = 106/134 (79.10%), Query Frame = 2 
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YR K+E+EL  IC  +L LL+ +LI +A++ ESKVFYLKMKGDY RYLAE   G +RK+  E++  AY+ A DI+  E+ P HPIRLGLALNFSVFYYEILN+P+ AC LAK AFDEAI+ELDTL E+SYKDST
Sbjct:   82 YREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDST 215
[Close]
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 1433T_CHICK (14-3-3 protein theta OS=Gallus gallus GN=YWHAQ PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 2.662e-44
Identity = 87/134 (64.93%), Postives = 106/134 (79.10%), Query Frame = 2 
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YR K+E+EL  IC  +L LL+ +LI +A++ ESKVFYLKMKGDY RYLAE   G +RK+  E++  AY+ A DI+  E+ P HPIRLGLALNFSVFYYEILN+P+ AC LAK AFDEAI+ELDTL E+SYKDST
Sbjct:   82 YREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDST 215
[Close]
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 1433B_PONAB (14-3-3 protein beta/alpha OS=Pongo abelii GN=YWHAB PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 2.662e-44
Identity = 86/134 (64.18%), Postives = 106/134 (79.10%), Query Frame = 2 
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YR KIE EL  IC+ +L LL+ +LIP+A+  ESKVFYLKMKGDY RYL+E  +G  ++    ++  AY+ A +I+  E+ P HPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAI+ELDTL EESYKDST
Sbjct:   84 YREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDST 217
[Close]
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 1433B_MACFA (14-3-3 protein beta/alpha OS=Macaca fascicularis GN=YWHAB PE=2 SV=3)

HSP 1 Score: 177.178 bits (448), Expect = 2.662e-44
Identity = 86/134 (64.18%), Postives = 106/134 (79.10%), Query Frame = 2 
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YR KIE EL  IC+ +L LL+ +LIP+A+  ESKVFYLKMKGDY RYL+E  +G  ++    ++  AY+ A +I+  E+ P HPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAI+ELDTL EESYKDST
Sbjct:   84 YREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDST 217
[Close]
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 1433B_HUMAN (14-3-3 protein beta/alpha OS=Homo sapiens GN=YWHAB PE=1 SV=3)

HSP 1 Score: 177.178 bits (448), Expect = 2.662e-44
Identity = 86/134 (64.18%), Postives = 106/134 (79.10%), Query Frame = 2 
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YR KIE EL  IC+ +L LL+ +LIP+A+  ESKVFYLKMKGDY RYL+E  +G  ++    ++  AY+ A +I+  E+ P HPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAI+ELDTL EESYKDST
Sbjct:   84 YREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDST 217
[Close]
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 1433B_BOVIN (14-3-3 protein beta/alpha OS=Bos taurus GN=YWHAB PE=1 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 2.662e-44
Identity = 86/134 (64.18%), Postives = 106/134 (79.10%), Query Frame = 2 
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YR KIE EL  IC+ +L LL+ +LIP+A+  ESKVFYLKMKGDY RYL+E  +G  ++    ++  AY+ A +I+  E+ P HPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAI+ELDTL EESYKDST
Sbjct:   84 YREKIEAELQDICNDVLQLLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDST 217
[Close]
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 1433B_CHICK (14-3-3 protein beta/alpha OS=Gallus gallus GN=YWHAB PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 4.540e-44
Identity = 86/134 (64.18%), Postives = 106/134 (79.10%), Query Frame = 2 
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YR KIE EL  IC+ +L LL+ +LI +A+  ESKVFYLKMKGDY+RYL+E  +G  ++    ++  AY+ A +I+  E+ P HPIRLGLALNFSVFYYEILNSP++ACNLAK AFDEAI+ELDTL EESYKDST
Sbjct:   82 YREKIEAELQDICNDVLELLDKYLIVNATQPESKVFYLKMKGDYYRYLSEVASGDNKQTTVANSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACNLAKTAFDEAIAELDTLNEESYKDST 215
The following BLAST results are available for this feature:
BLAST of GE213255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433T_XENLA2.662e-4464.9314-3-3 protein theta OS=Xenopus laevis GN=ywhaq PE... [more]
1433T_RAT2.662e-4464.9314-3-3 protein theta OS=Rattus norvegicus GN=Ywhaq... [more]
1433T_RABIT2.662e-4464.9314-3-3 protein theta OS=Oryctolagus cuniculus GN=Y... [more]
1433T_MOUSE2.662e-4464.9314-3-3 protein theta OS=Mus musculus GN=Ywhaq PE=1... [more]
1433T_CHICK2.662e-4464.9314-3-3 protein theta OS=Gallus gallus GN=YWHAQ PE=... [more]
1433B_PONAB2.662e-4464.1814-3-3 protein beta/alpha OS=Pongo abelii GN=YWHAB... [more]
1433B_MACFA2.662e-4464.1814-3-3 protein beta/alpha OS=Macaca fascicularis G... [more]
1433B_HUMAN2.662e-4464.1814-3-3 protein beta/alpha OS=Homo sapiens GN=YWHAB... [more]
1433B_BOVIN2.662e-4464.1814-3-3 protein beta/alpha OS=Bos taurus GN=YWHAB P... [more]
1433B_CHICK4.540e-4464.1814-3-3 protein beta/alpha OS=Gallus gallus GN=YWHA... [more]

Pages

back to top
Properties
Property NameValue
Genbank description105 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>GE213255 ID=GE213255; Name=GE213255; organism=Citrus sinensis; type=EST; length=443bp
ATTAGCGTGGTCGCGGCCGAGGTACAGGAGCAAGATTGAGAATGAGCTCA
GCAAGATCTGTGATGGGATTCTTAGCCTCCTTGAGTCTCATCTCATTCCC
TCTGCCTCATCGGCTGAGTCTAAGGTGTTCTACCTGAAGATGAAGGGTGA
TTACCACAGGTATTTGGCTGAGTTCAAGACTGGAGCTGAGAGGAAGGAAG
CTGCGGAGAGCACTTTGTTGGCCTACAAGTCAGCTCAGGATATTGCTTTA
GCTGAATTGGCCCCTGCTCACCCCATAAGGCTGGGACTTGCACTCAACTT
CTCTGTGTTCTACTATGAAATCCTTAACTCACCAGATCGTGCATGCAATC
TTGCGAAGCAGGCTTTTGATGAGGCCATTTCTGAGCTTGATACCTTGGGT
GAAGAATCATACAAGGACAGTACCTGCCCGGGCGGCCGCTCGA
back to top