EY728114

Overview
NameEY728114
Unique NameEY728114
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1005
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728114 vs. ExPASy Swiss-Prot
Match: TDH_VIBPA (L-threonine 3-dehydrogenase OS=Vibrio parahaemolyticus GN=tdh PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.842e-17
Identity = 48/140 (34.29%), Postives = 78/140 (55.71%), Query Frame = 1
Query:   91 VDPP--GSRHVVVKLEASGVCAGDIHPRDGGLPAPRTAVRPLVAGHEGIGKVVAVGELVQQFKTGDRVGMGWRRSTCHHCPQCQAGQENLCSSLVVNGFVHSGTFQEYITIPALDLIPIPNSNRSVNELAPLLCSGGNGL 504
            VD P  G   +++K++ + +C  D+H  +    + +T   P+V GHE +G+VVA+G+ V+ F+ GDRV  G    TC HC  C+ G+ +LC + +  G    G F EY+ IPA +   IP  +   ++LA +    GN +
Sbjct:   20 VDKPEVGHNDILIKIKKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVAIGQEVRGFEIGDRVS-GEGHITCGHCRNCRGGRTHLCRNTIGVGVNREGAFAEYLVIPAFNAFKIP--DEISDDLASIFDPFGNAV 156          
BLAST of EY728114 vs. ExPASy Swiss-Prot
Match: TDH_AERHH (L-threonine 3-dehydrogenase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=tdh PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 6.324e-17
Identity = 47/134 (35.07%), Postives = 75/134 (55.97%), Query Frame = 1
Query:  103 GSRHVVVKLEASGVCAGDIHPRDGGLPAPRTAVRPLVAGHEGIGKVVAVGELVQQFKTGDRVGMGWRRSTCHHCPQCQAGQENLCSSLVVNGFVHSGTFQEYITIPALDLIPIPNSNRSVNELAPLLCSGGNGL 504
            G   +++K+  + +C  DIH  +    + +T   P+V GHE +G+VVA+G+ V+ F  GDRV  G    TC HC  C+AG+ +LC + +  G    G F EY+ IPA +   +P++    +ELA +    GN +
Sbjct:   24 GHNDLLIKIRKTAICGTDIHIYNWDEWSQKTIPVPMVVGHEYVGEVVAIGQEVRGFAVGDRVS-GEGHITCGHCRNCRAGRTHLCRNTIGVGVNRPGAFAEYLVIPAFNAFKLPDN--VPDELAAIFDPFGNAV 154          
BLAST of EY728114 vs. ExPASy Swiss-Prot
Match: TDH_PSEHT (L-threonine 3-dehydrogenase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=tdh PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.260e-17
Identity = 48/134 (35.82%), Postives = 73/134 (54.48%), Query Frame = 1
Query:  103 GSRHVVVKLEASGVCAGDIHPRDGGLPAPRTAVRPLVAGHEGIGKVVAVGELVQQFKTGDRVGMGWRRSTCHHCPQCQAGQENLCSSLVVNGFVHSGTFQEYITIPALDLIPIPNSNRSVNELAPLLCSGGNGL 504
            G   +++K+  + +C  D+H       A +T   P+V GHE +G+VV +G+ V+ FK GDRV  G    TC HC  C+AG+ +LC +    G    G F EY+ IPA +   IP++    +ELA +    GN +
Sbjct:   24 GHNDLLIKIRKTAICGTDVHIYKWDEWAQKTIPTPMVVGHEYVGEVVDMGQEVRGFKVGDRVS-GEGHITCGHCRNCRAGRVHLCRNTTGVGVNREGAFAEYLVIPAFNAFKIPDN--ISDELASIFDPFGNAV 154          
BLAST of EY728114 vs. ExPASy Swiss-Prot
Match: TDH_PROMH (L-threonine 3-dehydrogenase OS=Proteus mirabilis (strain HI4320) GN=tdh PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.260e-17
Identity = 47/134 (35.07%), Postives = 74/134 (55.22%), Query Frame = 1
Query:  103 GSRHVVVKLEASGVCAGDIHPRDGGLPAPRTAVRPLVAGHEGIGKVVAVGELVQQFKTGDRVGMGWRRSTCHHCPQCQAGQENLCSSLVVNGFVHSGTFQEYITIPALDLIPIPNSNRSVNELAPLLCSGGNGL 504
            G   V++K+  + +C  D+H  +    + +T   P+V GHE IG++VA+G+ V+ F  GDRV  G    TC HC  C+ G+ +LC + +  G    G F EY+ IPA +   IP++    +ELA +    GN +
Sbjct:   24 GHNDVMIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYIGEIVAIGQEVKGFNIGDRVS-GEGHITCGHCRNCRGGRTHLCRNTIGVGVNRPGCFAEYLVIPAFNAFKIPDN--IPDELAAIFDPFGNAV 154          
BLAST of EY728114 vs. ExPASy Swiss-Prot
Match: TDH_SHEAM (L-threonine 3-dehydrogenase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=tdh PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.079e-16
Identity = 49/142 (34.51%), Postives = 77/142 (54.23%), Query Frame = 1
Query:   91 VDPP----GSRHVVVKLEASGVCAGDIHPRDGGLPAPRTAVRPLVAGHEGIGKVVAVGELVQQFKTGDRVGMGWRRSTCHHCPQCQAGQENLCSSLVVNGFVHSGTFQEYITIPALDLIPIPNSNRSVNELAPLLCSGGNGL 504
            VD P    G   +++K+  + +C  D+H  +    + +T   P+V GHE +G+VV +G+ V+ FK GDRV  G    TC HC  C+AG+ +LC +    G    G+F EY+ IPA +   IP+     ++LA +    GN +
Sbjct:   16 VDAPKPEMGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFKIGDRVS-GEGHITCGHCRNCRAGRTHLCRNTTGVGVNREGSFAEYLVIPAFNAFKIPDD--ISDDLAAIFDPFGNAV 154          
BLAST of EY728114 vs. ExPASy Swiss-Prot
Match: TDH_PSYIN (L-threonine 3-dehydrogenase OS=Psychromonas ingrahamii (strain 37) GN=tdh PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.079e-16
Identity = 43/115 (37.39%), Postives = 65/115 (56.52%), Query Frame = 1
Query:  100 PGSRHVVVKLEASGVCAGDIHPRDGGLPAPRTAVRPLVAGHEGIGKVVAVGELVQQFKTGDRVGMGWRRSTCHHCPQCQAGQENLCSSLVVNGFVHSGTFQEYITIPALDLIPIP 444
            PG   +++K+  + +C  DIH  +    +  T   P+V GHE +G+VV +G+ V+ F  GDRV  G    TC HC  C+AG+ +LC + +  G   +G F EY+ IPA +   IP
Sbjct:   25 PGHNDLLIKIHKTAICGTDIHIYNWDEWSQNTIPVPMVVGHEYVGEVVGMGQEVRGFSVGDRVS-GEGHITCGHCRNCRAGRTHLCRNTIGVGVNRTGAFAEYLVIPAFNAFKIP 138          
BLAST of EY728114 vs. ExPASy Swiss-Prot
Match: TDH_PECCP (L-threonine 3-dehydrogenase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=tdh PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.079e-16
Identity = 49/142 (34.51%), Postives = 78/142 (54.93%), Query Frame = 1
Query:   91 VDPP----GSRHVVVKLEASGVCAGDIHPRDGGLPAPRTAVRPLVAGHEGIGKVVAVGELVQQFKTGDRVGMGWRRSTCHHCPQCQAGQENLCSSLVVNGFVHSGTFQEYITIPALDLIPIPNSNRSVNELAPLLCSGGNGL 504
            VD P    G   +++K+  S +C  D+H  +    + +T   P+V GHE +G++VA+G+ V  F  GDRV  G    TC +C  C+AG+ +LC + +  G    G+F EY+ IPA +   IP++    +ELA +    GN +
Sbjct:   16 VDSPTPELGHNDIMIKIRKSAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEIVAIGQEVNGFHIGDRVS-GEGHITCGYCRNCRAGRRHLCRNAIGVGVNRPGSFAEYLVIPAYNAFRIPDN--ISDELAAIFDPFGNAV 154          
BLAST of EY728114 vs. ExPASy Swiss-Prot
Match: TDH_KLEP7 (L-threonine 3-dehydrogenase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=tdh PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.079e-16
Identity = 46/134 (34.33%), Postives = 75/134 (55.97%), Query Frame = 1
Query:  103 GSRHVVVKLEASGVCAGDIHPRDGGLPAPRTAVRPLVAGHEGIGKVVAVGELVQQFKTGDRVGMGWRRSTCHHCPQCQAGQENLCSSLVVNGFVHSGTFQEYITIPALDLIPIPNSNRSVNELAPLLCSGGNGL 504
            G   +++K+  + +C  D+H  +    + +T   P+V GHE +G+VV +G+ V+ FK GDRV  G    TC HC  C+AG+ +LC + +  G    G F EY+ IPA +   IP++    ++LA +    GN +
Sbjct:   24 GHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFKIGDRVS-GEGHITCGHCRNCRAGRTHLCRNTIGVGVNRPGCFAEYLVIPAFNAFKIPDN--ISDDLASIFDPFGNAV 154          
BLAST of EY728114 vs. ExPASy Swiss-Prot
Match: TDH_KLEP3 (L-threonine 3-dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=tdh PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.079e-16
Identity = 46/134 (34.33%), Postives = 75/134 (55.97%), Query Frame = 1
Query:  103 GSRHVVVKLEASGVCAGDIHPRDGGLPAPRTAVRPLVAGHEGIGKVVAVGELVQQFKTGDRVGMGWRRSTCHHCPQCQAGQENLCSSLVVNGFVHSGTFQEYITIPALDLIPIPNSNRSVNELAPLLCSGGNGL 504
            G   +++K+  + +C  D+H  +    + +T   P+V GHE +G+VV +G+ V+ FK GDRV  G    TC HC  C+AG+ +LC + +  G    G F EY+ IPA +   IP++    ++LA +    GN +
Sbjct:   24 GHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFKIGDRVS-GEGHITCGHCRNCRAGRTHLCRNTIGVGVNRPGCFAEYLVIPAFNAFKIPDN--ISDDLASIFDPFGNAV 154          
BLAST of EY728114 vs. ExPASy Swiss-Prot
Match: TDH_ESCF3 (L-threonine 3-dehydrogenase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=tdh PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.079e-16
Identity = 46/134 (34.33%), Postives = 75/134 (55.97%), Query Frame = 1
Query:  103 GSRHVVVKLEASGVCAGDIHPRDGGLPAPRTAVRPLVAGHEGIGKVVAVGELVQQFKTGDRVGMGWRRSTCHHCPQCQAGQENLCSSLVVNGFVHSGTFQEYITIPALDLIPIPNSNRSVNELAPLLCSGGNGL 504
            G   +++K+  + +C  D+H  +    + +T   P+V GHE +G+VV +G+ V+ FK GDRV  G    TC HC  C+AG+ +LC + +  G    G F EY+ IPA +   IP++    ++LA +    GN +
Sbjct:   24 GHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVS-GEGHITCGHCRNCRAGRTHLCRNTIGVGVNRPGCFAEYLVIPAFNAFKIPDN--ISDDLASIFDPFGNAV 154          
The following BLAST results are available for this feature:
BLAST of EY728114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 257
Match NameE-valueIdentityDescription
TDH_VIBPA4.842e-1734.29L-threonine 3-dehydrogenase OS=Vibrio parahaemolyt... [more]
TDH_AERHH6.324e-1735.07L-threonine 3-dehydrogenase OS=Aeromonas hydrophil... [more]
TDH_PSEHT8.260e-1735.82L-threonine 3-dehydrogenase OS=Pseudoalteromonas h... [more]
TDH_PROMH8.260e-1735.07L-threonine 3-dehydrogenase OS=Proteus mirabilis (... [more]
TDH_SHEAM1.079e-1634.51L-threonine 3-dehydrogenase OS=Shewanella amazonen... [more]
TDH_PSYIN1.079e-1637.39L-threonine 3-dehydrogenase OS=Psychromonas ingrah... [more]
TDH_PECCP1.079e-1634.51L-threonine 3-dehydrogenase OS=Pectobacterium caro... [more]
TDH_KLEP71.079e-1634.33L-threonine 3-dehydrogenase OS=Klebsiella pneumoni... [more]
TDH_KLEP31.079e-1634.33L-threonine 3-dehydrogenase OS=Klebsiella pneumoni... [more]
TDH_ESCF31.079e-1634.33L-threonine 3-dehydrogenase OS=Escherichia ferguso... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-110-G03-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728114 ID=EY728114; Name=EY728114; organism=Citrus sinensis; type=EST; length=1005bp
CATGGGCAGTCTTGATGTTCCGGAGACCAAACAGCCGCTGTCTTGCATGG
GCCTTATGGTGAGCGACATACGATTGAAAGGAAACATGCAGTCGATCCGC
CAGGATCTCGCCATGTGGTCGTCAAACTGGAAGCCAGTGGTGTTTGCGCT
GGCGATATCCATCCCCGAGATGGCGGCCTGCCAGCGCCACGGACTGCGGT
ACGGCCTCTTGTAGCTGGCCACGAGGGAATTGGCAAGGTTGTTGCCGTTG
GAGAGCTCGTACAGCAGTTCAAGACTGGTGATCGGGTGGGCATGGGCTGG
AGACGATCGACCTGTCACCATTGCCCTCAATGTCAAGCCGGCCAAGAGAA
TTTATGCTCTAGCCTCGTTGTCAACGGCTTTGTACATAGCGGCACCTTCC
AAGAGTACATCACTATTCCCGCGTTGGACCTCATTCCCATTCCCAACAGT
AACCGAAGCGTCAACGAGCTCGCGCCACTCCTATGCTCTGGCGGGAATGG
TTTAACCCGCAGTTTCGTACCGGCGCAAGTAACCACGGGATTCAATGGGC
TGGTGTGTAACGGGTGCCGCAAGAGGGTGGAAGGATCCCTTGCAGATACG
ATAGGCCAAACTACTTTTGGCCAGGAAGGGTCTCCGTGGAAAACAACGCG
GAAAAAAAATCTTTCTTGGCGAGAGACTGTGGGGGCCCCTTTTTGTAACT
TTATGAACCCCTAGAATGGTTTAGGAAAAAAAAGAAAAAAATATAAAATT
GGAAGAAGATCTCAATGGGGATAAGAAGGTTTTCTGAATAACAGACAATA
CCAAACCATAAAATGAATAAAAAATCATGTTATGAACTAGAAAAAAAAAA
AATACATACAAGAAATTTTGAGATAATAACAACAACTTCAAATATAGAGA
AAATTGATAATTATTTTGCAAAGAGATAATAATAAAATAAAAAAAAAAAG
ATGAAAAAAAACAAAAAAAAAACATATGATTGAGAATATAAGAAAAGAAG
CAAAA
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