EY728114

Overview
NameEY728114
Unique NameEY728114
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1005
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728114 vs. ExPASy Swiss-Prot
Match: TDH_SERP5 (L-threonine 3-dehydrogenase OS=Serratia proteamaculans (strain 568) GN=tdh PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.409e-16
Identity = 46/134 (34.33%), Postives = 74/134 (55.22%), Query Frame = 1
Query:  103 GSRHVVVKLEASGVCAGDIHPRDGGLPAPRTAVRPLVAGHEGIGKVVAVGELVQQFKTGDRVGMGWRRSTCHHCPQCQAGQENLCSSLVVNGFVHSGTFQEYITIPALDLIPIPNSNRSVNELAPLLCSGGNGL 504
            G   +++K+  + +C  D+H  +    + +T   P+V GHE +G+VVA+G+ V+ F  GDRV  G    TC HC  C+ G+ +LC +    G    G+F EY+ IPA +   IP++    +ELA +    GN +
Sbjct:   24 GHNDIMIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVAIGQEVKGFTVGDRVS-GEGHITCGHCRNCRGGRTHLCRNTTGVGVNRPGSFAEYLVIPAFNAFKIPDN--ISDELASIFDPFGNAV 154          
BLAST of EY728114 vs. ExPASy Swiss-Prot
Match: TDH_ERWCT (L-threonine 3-dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=tdh PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.409e-16
Identity = 46/134 (34.33%), Postives = 75/134 (55.97%), Query Frame = 1
Query:  103 GSRHVVVKLEASGVCAGDIHPRDGGLPAPRTAVRPLVAGHEGIGKVVAVGELVQQFKTGDRVGMGWRRSTCHHCPQCQAGQENLCSSLVVNGFVHSGTFQEYITIPALDLIPIPNSNRSVNELAPLLCSGGNGL 504
            G   +++K+  S +C  D+H  +    + +T   P+V GHE +G++VA+G+ V  F  GDRV  G    TC +C  C+AG+ +LC + +  G    G+F EY+ IPA +   IP++    +ELA +    GN +
Sbjct:   24 GHNDIMIKIRKSAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEIVAIGQEVNGFHIGDRVS-GEGHITCGYCRNCRAGRRHLCRNAIGVGVNRPGSFAEYLVIPAYNAFRIPDN--ISDELAAIFDPFGNAV 154          
BLAST of EY728114 vs. ExPASy Swiss-Prot
Match: TDH_VIBVY (L-threonine 3-dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=tdh PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.840e-16
Identity = 49/140 (35.00%), Postives = 80/140 (57.14%), Query Frame = 1
Query:   91 VDPP--GSRHVVVKLEASGVCAGDIHPRDGGLPAPRTAVRPLVAGHEGIGKVVAVGELVQQFKTGDRVGMGWRRSTCHHCPQCQAGQENLCSSLVVNGFVHSGTFQEYITIPALDLIPIPNSNRSVNELAPLLCSGGNGL 504
            VD P  G   +++K++ + +C  D+H  +    + +T   P+V GHE +G+VV +G+ V+ F+ GDRV  G    TC HC  C+ G+ +LC + +  G   +G F EY+ IPA +   IP +N S ++LA +    GN +
Sbjct:   20 VDKPVLGHNDLLIKIKKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFEIGDRVS-GEGHITCGHCRNCRGGRTHLCRNTIGVGVNRTGCFSEYLVIPAFNAFKIP-ANIS-DDLASIFDPFGNAV 156          
BLAST of EY728114 vs. ExPASy Swiss-Prot
Match: TDH_VIBVU (L-threonine 3-dehydrogenase OS=Vibrio vulnificus GN=tdh PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.840e-16
Identity = 49/140 (35.00%), Postives = 80/140 (57.14%), Query Frame = 1
Query:   91 VDPP--GSRHVVVKLEASGVCAGDIHPRDGGLPAPRTAVRPLVAGHEGIGKVVAVGELVQQFKTGDRVGMGWRRSTCHHCPQCQAGQENLCSSLVVNGFVHSGTFQEYITIPALDLIPIPNSNRSVNELAPLLCSGGNGL 504
            VD P  G   +++K++ + +C  D+H  +    + +T   P+V GHE +G+VV +G+ V+ F+ GDRV  G    TC HC  C+ G+ +LC + +  G   +G F EY+ IPA +   IP +N S ++LA +    GN +
Sbjct:   20 VDKPVLGHNDLLIKIKKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFEIGDRVS-GEGHITCGHCRNCRGGRTHLCRNTIGVGVNRTGCFSEYLVIPAFNAFKIP-ANIS-DDLASIFDPFGNAV 156          
BLAST of EY728114 vs. ExPASy Swiss-Prot
Match: TDH_PHOLL (L-threonine 3-dehydrogenase OS=Photorhabdus luminescens subsp. laumondii GN=tdh PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.840e-16
Identity = 46/134 (34.33%), Postives = 76/134 (56.72%), Query Frame = 1
Query:  103 GSRHVVVKLEASGVCAGDIHPRDGGLPAPRTAVRPLVAGHEGIGKVVAVGELVQQFKTGDRVGMGWRRSTCHHCPQCQAGQENLCSSLVVNGFVHSGTFQEYITIPALDLIPIPNSNRSVNELAPLLCSGGNGL 504
            G   V++K+  + +C  D+H  +    + +T   P+V GHE +G+VVA+G+ V+ FK GDRV  G    TC +C  C+ G+ +LC + +  G   +G F +Y+ IPA +   IP++    +ELA +    GN +
Sbjct:   24 GHNDVMIKIRKTAICGTDVHIYNWDDWSQKTIPVPMVVGHEYVGEVVAIGQEVKGFKIGDRVS-GEGHITCGYCRNCRGGRTHLCRNTIGVGVNRAGCFAQYLVIPAFNAFKIPDN--ISDELAAIFDPFGNAV 154          
BLAST of EY728114 vs. ExPASy Swiss-Prot
Match: TDH_VIBCM (L-threonine 3-dehydrogenase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=tdh PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.403e-16
Identity = 47/140 (33.57%), Postives = 78/140 (55.71%), Query Frame = 1
Query:   91 VDPP--GSRHVVVKLEASGVCAGDIHPRDGGLPAPRTAVRPLVAGHEGIGKVVAVGELVQQFKTGDRVGMGWRRSTCHHCPQCQAGQENLCSSLVVNGFVHSGTFQEYITIPALDLIPIPNSNRSVNELAPLLCSGGNGL 504
            VD P  G   +++K++ + +C  D+H  +    + +T   P+V GHE +G+VV +G+ V+ F+ GDRV  G    TC HC  C+ G+ +LC + +  G   +G F EY+ IPA +   IP+     ++LA +    GN +
Sbjct:   20 VDMPELGHNDLLIKIKKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFQIGDRVS-GEGHITCGHCRNCRGGRTHLCRNTIGVGVNRTGCFSEYLVIPAFNAFKIPDG--ISDDLASIFDPFGNAV 156          
BLAST of EY728114 vs. ExPASy Swiss-Prot
Match: TDH_VIBCH (L-threonine 3-dehydrogenase OS=Vibrio cholerae GN=tdh PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.403e-16
Identity = 47/140 (33.57%), Postives = 78/140 (55.71%), Query Frame = 1
Query:   91 VDPP--GSRHVVVKLEASGVCAGDIHPRDGGLPAPRTAVRPLVAGHEGIGKVVAVGELVQQFKTGDRVGMGWRRSTCHHCPQCQAGQENLCSSLVVNGFVHSGTFQEYITIPALDLIPIPNSNRSVNELAPLLCSGGNGL 504
            VD P  G   +++K++ + +C  D+H  +    + +T   P+V GHE +G+VV +G+ V+ F+ GDRV  G    TC HC  C+ G+ +LC + +  G   +G F EY+ IPA +   IP+     ++LA +    GN +
Sbjct:   20 VDMPELGHNDLLIKIKKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFQIGDRVS-GEGHITCGHCRNCRGGRTHLCRNTIGVGVNRTGCFSEYLVIPAFNAFKIPDG--ISDDLASIFDPFGNAV 156          
BLAST of EY728114 vs. ExPASy Swiss-Prot
Match: TDH_VIBC3 (L-threonine 3-dehydrogenase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=tdh PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.403e-16
Identity = 47/140 (33.57%), Postives = 78/140 (55.71%), Query Frame = 1
Query:   91 VDPP--GSRHVVVKLEASGVCAGDIHPRDGGLPAPRTAVRPLVAGHEGIGKVVAVGELVQQFKTGDRVGMGWRRSTCHHCPQCQAGQENLCSSLVVNGFVHSGTFQEYITIPALDLIPIPNSNRSVNELAPLLCSGGNGL 504
            VD P  G   +++K++ + +C  D+H  +    + +T   P+V GHE +G+VV +G+ V+ F+ GDRV  G    TC HC  C+ G+ +LC + +  G   +G F EY+ IPA +   IP+     ++LA +    GN +
Sbjct:   20 VDMPELGHNDLLIKIKKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFQIGDRVS-GEGHITCGHCRNCRGGRTHLCRNTIGVGVNRTGCFSEYLVIPAFNAFKIPDG--ISDDLASIFDPFGNAV 156          
BLAST of EY728114 vs. ExPASy Swiss-Prot
Match: TDH_ENTS8 (L-threonine 3-dehydrogenase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=tdh PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.403e-16
Identity = 46/134 (34.33%), Postives = 74/134 (55.22%), Query Frame = 1
Query:  103 GSRHVVVKLEASGVCAGDIHPRDGGLPAPRTAVRPLVAGHEGIGKVVAVGELVQQFKTGDRVGMGWRRSTCHHCPQCQAGQENLCSSLVVNGFVHSGTFQEYITIPALDLIPIPNSNRSVNELAPLLCSGGNGL 504
            G   +++K+  + +C  D+H  +    + +T   P+V GHE +G+VV +G+ V+ FK GDRV  G    TC HC  C+ G+ +LC + V  G    G F EY+ IPA +   IP++    ++LA +    GN +
Sbjct:   24 GHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVS-GEGHITCGHCRNCRGGRTHLCRNTVGVGVNRPGCFAEYLVIPAFNAFKIPDN--ISDDLASIFDPFGNAV 154          
BLAST of EY728114 vs. ExPASy Swiss-Prot
Match: TDH_ENT38 (L-threonine 3-dehydrogenase OS=Enterobacter sp. (strain 638) GN=tdh PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.403e-16
Identity = 46/134 (34.33%), Postives = 74/134 (55.22%), Query Frame = 1
Query:  103 GSRHVVVKLEASGVCAGDIHPRDGGLPAPRTAVRPLVAGHEGIGKVVAVGELVQQFKTGDRVGMGWRRSTCHHCPQCQAGQENLCSSLVVNGFVHSGTFQEYITIPALDLIPIPNSNRSVNELAPLLCSGGNGL 504
            G   +++K+  + +C  D+H  +    + +T   P+V GHE +G+VV +G+ V+ FK GDRV  G    TC HC  C+ G+ +LC + V  G    G F EY+ IPA +   IP++    ++LA +    GN +
Sbjct:   24 GHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVS-GEGHITCGHCRNCRGGRTHLCRNTVGVGVNRPGCFAEYLVIPAFNAFKIPDN--ISDDLASIFDPFGNAV 154          
The following BLAST results are available for this feature:
BLAST of EY728114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 257
Match NameE-valueIdentityDescription
TDH_SERP51.409e-1634.33L-threonine 3-dehydrogenase OS=Serratia proteamacu... [more]
TDH_ERWCT1.409e-1634.33L-threonine 3-dehydrogenase OS=Erwinia carotovora ... [more]
TDH_VIBVY1.840e-1635.00L-threonine 3-dehydrogenase OS=Vibrio vulnificus (... [more]
TDH_VIBVU1.840e-1635.00L-threonine 3-dehydrogenase OS=Vibrio vulnificus G... [more]
TDH_PHOLL1.840e-1634.33L-threonine 3-dehydrogenase OS=Photorhabdus lumine... [more]
TDH_VIBCM2.403e-1633.57L-threonine 3-dehydrogenase OS=Vibrio cholerae ser... [more]
TDH_VIBCH2.403e-1633.57L-threonine 3-dehydrogenase OS=Vibrio cholerae GN=... [more]
TDH_VIBC32.403e-1633.57L-threonine 3-dehydrogenase OS=Vibrio cholerae ser... [more]
TDH_ENTS82.403e-1634.33L-threonine 3-dehydrogenase OS=Enterobacter sakaza... [more]
TDH_ENT382.403e-1634.33L-threonine 3-dehydrogenase OS=Enterobacter sp. (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-110-G03-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728114 ID=EY728114; Name=EY728114; organism=Citrus sinensis; type=EST; length=1005bp
CATGGGCAGTCTTGATGTTCCGGAGACCAAACAGCCGCTGTCTTGCATGG
GCCTTATGGTGAGCGACATACGATTGAAAGGAAACATGCAGTCGATCCGC
CAGGATCTCGCCATGTGGTCGTCAAACTGGAAGCCAGTGGTGTTTGCGCT
GGCGATATCCATCCCCGAGATGGCGGCCTGCCAGCGCCACGGACTGCGGT
ACGGCCTCTTGTAGCTGGCCACGAGGGAATTGGCAAGGTTGTTGCCGTTG
GAGAGCTCGTACAGCAGTTCAAGACTGGTGATCGGGTGGGCATGGGCTGG
AGACGATCGACCTGTCACCATTGCCCTCAATGTCAAGCCGGCCAAGAGAA
TTTATGCTCTAGCCTCGTTGTCAACGGCTTTGTACATAGCGGCACCTTCC
AAGAGTACATCACTATTCCCGCGTTGGACCTCATTCCCATTCCCAACAGT
AACCGAAGCGTCAACGAGCTCGCGCCACTCCTATGCTCTGGCGGGAATGG
TTTAACCCGCAGTTTCGTACCGGCGCAAGTAACCACGGGATTCAATGGGC
TGGTGTGTAACGGGTGCCGCAAGAGGGTGGAAGGATCCCTTGCAGATACG
ATAGGCCAAACTACTTTTGGCCAGGAAGGGTCTCCGTGGAAAACAACGCG
GAAAAAAAATCTTTCTTGGCGAGAGACTGTGGGGGCCCCTTTTTGTAACT
TTATGAACCCCTAGAATGGTTTAGGAAAAAAAAGAAAAAAATATAAAATT
GGAAGAAGATCTCAATGGGGATAAGAAGGTTTTCTGAATAACAGACAATA
CCAAACCATAAAATGAATAAAAAATCATGTTATGAACTAGAAAAAAAAAA
AATACATACAAGAAATTTTGAGATAATAACAACAACTTCAAATATAGAGA
AAATTGATAATTATTTTGCAAAGAGATAATAATAAAATAAAAAAAAAAAG
ATGAAAAAAAACAAAAAAAAAACATATGATTGAGAATATAAGAAAAGAAG
CAAAA
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