EY754168

Overview
NameEY754168
Unique NameEY754168
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY754168 vs. ExPASy Swiss-Prot
Match: THIL_CHRVI (Acetyl-CoA acetyltransferase OS=Chromatium vinosum GN=phbA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.961e-12
Identity = 58/171 (33.92%), Postives = 87/171 (50.88%), Query Frame = 2
Query:  269 DDVVIVAAYRTAICKAKRGGFKDTL-ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTGNS----------ISGWWPVKPKVEIFTQARDCL--LPMGITSENVPQNW 742
            +++VIV A R+AI     GG   +L A ++   VLK ++ +T L P ++ ++++G VL  G  +    R    +AG P +VP  T+N+ C SGL+AV     AI  G  DI IA G ESM+ +S            G W +K  + I     D      MG T+EN+ Q +
Sbjct:    3 ENIVIVDAGRSAI--GTFGGSLSSLSATEIGTAVLKGLLARTGLAPEQIDEVILGQVLTAGVGQN-PARQTTLHAGLPHSVPAMTINKVCGSGLKAVHLAMQAIACGDADIVIAGGQESMSQSSHVLPRSRDGQRMGDWSMKDTM-IVDGLWDAFNNYHMGTTAENIAQKY 169          
BLAST of EY754168 vs. ExPASy Swiss-Prot
Match: ATOB_ECOLI (Acetyl-CoA acetyltransferase OS=Escherichia coli (strain K12) GN=atoB PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.961e-12
Identity = 48/117 (41.03%), Postives = 69/117 (58.97%), Query Frame = 2
Query:  278 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 628
            VIV+A RTAI  +  G    T A DL A V+KA IE+ +++   V ++++G VL  G  +    R A   +G  ETV   TVN+ C SGL++VA  A AI+AG     +A G+E+M+
Sbjct:    5 VIVSAVRTAI-GSFNGSLASTSAIDLGATVIKAAIERAKIDSQHVDEVIMGNVLQAGLGQN-PARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMS 119          
BLAST of EY754168 vs. ExPASy Swiss-Prot
Match: FADA_YERPS (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis GN=fadA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.867e-12
Identity = 46/120 (38.33%), Postives = 66/120 (55.00%), Query Frame = 2
Query:  269 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR-LNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 625
            ++VVI+ A RT + ++K G F+   A+DL A +++AVI +   LN +E+ DI  G V           R A+  A  P +VP  TVNR C S +QA+ D A AI  G   I +  G+E M
Sbjct:    2 ENVVIIDAVRTPMGRSKGGAFRHVRAEDLSAHLMRAVISRNPGLNAAEIDDIYWGCVQQTLEQGFNIARNASLLAEIPHSVPAVTVNRLCGSSMQALHDGARAIMVGDAKISLIGGVEHM 121          
BLAST of EY754168 vs. ExPASy Swiss-Prot
Match: FADA_YERPP (3-ketoacyl-CoA thiolase OS=Yersinia pestis (strain Pestoides F) GN=fadA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.867e-12
Identity = 46/120 (38.33%), Postives = 66/120 (55.00%), Query Frame = 2
Query:  269 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR-LNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 625
            ++VVI+ A RT + ++K G F+   A+DL A +++AVI +   LN +E+ DI  G V           R A+  A  P +VP  TVNR C S +QA+ D A AI  G   I +  G+E M
Sbjct:    2 ENVVIIDAVRTPMGRSKGGAFRHVRAEDLSAHLMRAVISRNPGLNAAEIDDIYWGCVQQTLEQGFNIARNASLLAEIPHSVPAVTVNRLCGSSMQALHDGARAIMVGDAKISLIGGVEHM 121          
BLAST of EY754168 vs. ExPASy Swiss-Prot
Match: FADA_YERPN (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=fadA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.867e-12
Identity = 46/120 (38.33%), Postives = 66/120 (55.00%), Query Frame = 2
Query:  269 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR-LNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 625
            ++VVI+ A RT + ++K G F+   A+DL A +++AVI +   LN +E+ DI  G V           R A+  A  P +VP  TVNR C S +QA+ D A AI  G   I +  G+E M
Sbjct:    2 ENVVIIDAVRTPMGRSKGGAFRHVRAEDLSAHLMRAVISRNPGLNAAEIDDIYWGCVQQTLEQGFNIARNASLLAEIPHSVPAVTVNRLCGSSMQALHDGARAIMVGDAKISLIGGVEHM 121          
BLAST of EY754168 vs. ExPASy Swiss-Prot
Match: FADA_YERPE (3-ketoacyl-CoA thiolase OS=Yersinia pestis GN=fadA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.867e-12
Identity = 46/120 (38.33%), Postives = 66/120 (55.00%), Query Frame = 2
Query:  269 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR-LNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 625
            ++VVI+ A RT + ++K G F+   A+DL A +++AVI +   LN +E+ DI  G V           R A+  A  P +VP  TVNR C S +QA+ D A AI  G   I +  G+E M
Sbjct:    2 ENVVIIDAVRTPMGRSKGGAFRHVRAEDLSAHLMRAVISRNPGLNAAEIDDIYWGCVQQTLEQGFNIARNASLLAEIPHSVPAVTVNRLCGSSMQALHDGARAIMVGDAKISLIGGVEHM 121          
BLAST of EY754168 vs. ExPASy Swiss-Prot
Match: FADA_YERPA (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=fadA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.867e-12
Identity = 46/120 (38.33%), Postives = 66/120 (55.00%), Query Frame = 2
Query:  269 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR-LNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 625
            ++VVI+ A RT + ++K G F+   A+DL A +++AVI +   LN +E+ DI  G V           R A+  A  P +VP  TVNR C S +QA+ D A AI  G   I +  G+E M
Sbjct:    2 ENVVIIDAVRTPMGRSKGGAFRHVRAEDLSAHLMRAVISRNPGLNAAEIDDIYWGCVQQTLEQGFNIARNASLLAEIPHSVPAVTVNRLCGSSMQALHDGARAIMVGDAKISLIGGVEHM 121          
BLAST of EY754168 vs. ExPASy Swiss-Prot
Match: FADA_YERP3 (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=fadA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.867e-12
Identity = 46/120 (38.33%), Postives = 66/120 (55.00%), Query Frame = 2
Query:  269 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR-LNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 625
            ++VVI+ A RT + ++K G F+   A+DL A +++AVI +   LN +E+ DI  G V           R A+  A  P +VP  TVNR C S +QA+ D A AI  G   I +  G+E M
Sbjct:    2 ENVVIIDAVRTPMGRSKGGAFRHVRAEDLSAHLMRAVISRNPGLNAAEIDDIYWGCVQQTLEQGFNIARNASLLAEIPHSVPAVTVNRLCGSSMQALHDGARAIMVGDAKISLIGGVEHM 121          
BLAST of EY754168 vs. ExPASy Swiss-Prot
Match: FADA_IDILO (3-ketoacyl-CoA thiolase OS=Idiomarina loihiensis GN=fadA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.867e-12
Identity = 46/119 (38.66%), Postives = 65/119 (54.62%), Query Frame = 2
Query:  272 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 625
            D+VIV   RT + ++K G F+ T A+DL A ++K ++E+   ++P E+ DI  G V           R +A  AG P  V   TVNR C S +QA+ D   AI  G  DI +A G+E M
Sbjct:    3 DIVIVDCIRTPMGRSKNGVFRHTRAEDLSAALMKGLLERNPEVDPEELEDIYWGCVQQTLEQGFNIARNSALIAGIPHKVAGVTVNRLCGSSMQALHDATRAIMNGDGDIFMAGGVEHM 121          
BLAST of EY754168 vs. ExPASy Swiss-Prot
Match: FADA_PSYA2 (3-ketoacyl-CoA thiolase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=fadA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.051e-12
Identity = 43/118 (36.44%), Postives = 62/118 (52.54%), Query Frame = 2
Query:  272 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 625
            DVVIV   R+A+ K K G F+   AD + A +++A++E+   +P +V DI+ G V           R     AG P+T   +TVNR C S +QA+   A  I  G  D+ I  G+E M
Sbjct:    8 DVVIVDGVRSAMGKTKNGMFRHVRADSMSAELVRALVERNDFDPRDVEDIIWGCVNQTLEQGLNIGRNIGLLAGIPKTAGGQTVNRLCGSSMQALHTAAAQIMTGQGDVFIIGGVEHM 125          
The following BLAST results are available for this feature:
BLAST of EY754168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
THIL_CHRVI2.961e-1233.92Acetyl-CoA acetyltransferase OS=Chromatium vinosum... [more]
ATOB_ECOLI2.961e-1241.03Acetyl-CoA acetyltransferase OS=Escherichia coli (... [more]
FADA_YERPS3.867e-1238.333-ketoacyl-CoA thiolase OS=Yersinia pseudotubercul... [more]
FADA_YERPP3.867e-1238.333-ketoacyl-CoA thiolase OS=Yersinia pestis (strain... [more]
FADA_YERPN3.867e-1238.333-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Ant... [more]
FADA_YERPE3.867e-1238.333-ketoacyl-CoA thiolase OS=Yersinia pestis GN=fadA... [more]
FADA_YERPA3.867e-1238.333-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Ant... [more]
FADA_YERP33.867e-1238.333-ketoacyl-CoA thiolase OS=Yersinia pseudotubercul... [more]
FADA_IDILO3.867e-1238.663-ketoacyl-CoA thiolase OS=Idiomarina loihiensis G... [more]
FADA_PSYA25.051e-1236.443-ketoacyl-CoA thiolase OS=Psychrobacter arcticus ... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-011-E06-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY754168 ID=EY754168; Name=EY754168; organism=Citrus sinensis; type=EST; length=886bp
AAAAAAAAAAAAAAAAGTACTATAACTTCGGAGTAGATTCAAACCAGGAA
AGAGTAAACAAGTCATCCCTGGTTCTCGATTCATCAGAACTCAAAAGCTT
TCCATTGAAACCTGAGAGTGAGAGATGGAGAAAGCTCTTCACAGACAGAG
AATTCTGCTTCAACATCTTCAACCTTCTTCTTCCCAAACCAGTGACTCGC
CGGCTATTTCTGCTTCGATTTGTTCGGCTGGTGAGGCTGCAGGGTACCAT
AGGAAGCCTGCTTTTGATGATGATGTCGTCATTGTGGCTGCATACCGTAC
TGCAATTTGCAAGGCGAAACGTGGAGGCTTCAAGGATACTCTTGCCGATG
ATCTGCTTGCACCTGTTCTAAAGGCAGTGATAGAGAAAACGAGGTTGAAT
CCCAGTGAAGTAGGGGATATAGTTGTTGGTACAGTCTTGGCACCTGGCTC
AACAAGAGCCATGGAGTGTAGGATGGCAGCGTTCTATGCTGGTTTCCCTG
AAACGGTGCCCCTCAGAACTGTCAACAGGCAGTGTTCATCTGGCTTGCAG
GCGGTTGCTGATGTTGCAACAGCTATAAAAGCTGGATTGTATGACATTGG
TATTGCTGCTGGATTGGAAAGCATGACTGGGAATTCTATTAGCGGTTGGT
GGCCAGTTAAACCCAAAGTGGAGATCTTTACTCAAGCTCGGGACTGTCTG
CTTCCTATGGGTATCACTTCTGAAAATGTGCCACAGAATTGGGTGTGACA
CGACAGGACCAGACCTGGCTGGCGTGGATCTAATGGCGTGCTGCTGCTGC
ACTGCTTTTGGCAGTTTAAGATGAAATTTTTCAGGAATACAAGATGGGGG
CCCAAACTGGGTGGAGAACGGCCCAATTTGGGGAGA
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