EY727934
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY727934 vs. ExPASy Swiss-Prot
Match: PP447_ARATH (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.553e-12 Identity = 35/94 (37.23%), Postives = 53/94 (56.38%), Query Frame = 1 Query: 16 GLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT 297 G + DA L +MR+ G PN CYT LI CK+ +M+EA V EM + +TYT ++ G+CK G + + +L+ M +KG+ P +T Sbjct: 301 GKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELT 394
BLAST of EY727934 vs. ExPASy Swiss-Prot
Match: PP178_ARATH (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 1.672e-12 Identity = 34/94 (36.17%), Postives = 51/94 (54.26%), Query Frame = 1 Query: 13 IGLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSI 294 +G E+A + EM G+ +V Y AL+GGY K G+ DE + V EM ++ PN +TY+ +I GY K G KEA ++ G+ D + Sbjct: 457 VGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVV 550 HSP 2 Score: 28.1054 bits (61), Expect = 1.672e-12 Identity = 15/54 (27.78%), Postives = 25/54 (46.30%), Query Frame = 3 Query: 321 IAKEGMWKKLLK*CDRMLSEGLSLDEITYTNLIDGWQSSTISIQDNHLIFGGQL 482 + K G+ + D M EG+S + +TY ++ID + S + GG L Sbjct: 559 LCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSL 612 HSP 3 Score: 65.0846 bits (157), Expect = 4.970e-11 Identity = 33/94 (35.11%), Postives = 53/94 (56.38%), Query Frame = 1 Query: 16 GLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT 297 G ++A LF EMR G+ + Y L+ Y K+G+ +EA +L+EMAS+ I + +TY ++GGY K G E K+ M + + P+ +T Sbjct: 423 GRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLT 516 HSP 4 Score: 23.8682 bits (50), Expect = 4.970e-11 Identity = 8/23 (34.78%), Postives = 15/23 (65.22%), Query Frame = 2 Query: 302 NVFMDGHCKGGNVEEAFKVMRSY 370 + +DG+ KGG +EA ++ R + Sbjct: 518 STLIDGYSKGGLYKEAMEIFREF 540 HSP 5 Score: 68.5514 bits (166), Expect = 6.524e-11 Identity = 33/94 (35.11%), Postives = 55/94 (58.51%), Query Frame = 1 Query: 16 GLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT 297 G ++ K +F EM++E +LPN+ Y+ LI GY K G EA + +E S + + + Y+ +I CK G + A L++ M ++GISP+ +T Sbjct: 493 GKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVT 586
BLAST of EY727934 vs. ExPASy Swiss-Prot
Match: PP389_ARATH (Pentatricopeptide repeat-containing protein At5g16640, mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.028e-12 Identity = 33/92 (35.87%), Postives = 54/92 (58.70%), Query Frame = 1 Query: 22 IEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT 297 +E LF EM + G++ N YT LI GYC+ G+++ AE + + M +HPN ITY +++ G C G +++A +L M + G+ D +T Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVT 433 HSP 2 Score: 68.1662 bits (165), Expect = 8.520e-11 Identity = 31/94 (32.98%), Postives = 56/94 (59.57%), Query Frame = 1 Query: 16 GLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT 297 G + +A+ ++EM + L P++ Y+ LI G C ++DEAE + M S P+ +TY+I+I GYCK ++ KL M+++G+ +++T Sbjct: 270 GRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363
BLAST of EY727934 vs. ExPASy Swiss-Prot
Match: PP282_ARATH (Pentatricopeptide repeat-containing protein At3g54980, mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 2.175e-12 Identity = 30/90 (33.33%), Postives = 53/90 (58.89%), Query Frame = 1 Query: 16 GLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISP 285 G ++ A ++EM G+ PNV YT+L+ G CK +MD+A + EM + + + Y +I G+CK +M+ A+ L + + E+G++P Sbjct: 598 GEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNP 687 HSP 2 Score: 29.6462 bits (65), Expect = 2.175e-12 Identity = 21/60 (35.00%), Postives = 28/60 (46.67%), Query Frame = 3 Query: 306 SLWMGIAKEGMWKKLLK*CDRMLSEGLSLDEITYTNLIDGWQSSTISIQDNHLIFGGQLH 485 SL G G L +ML +GL D TYT LIDG ++D +LI +L+ Sbjct: 694 SLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDG------LLKDGNLILASELY 747
BLAST of EY727934 vs. ExPASy Swiss-Prot
Match: PPR56_ARATH (Pentatricopeptide repeat-containing protein At1g22960, mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.185e-12 Identity = 32/92 (34.78%), Postives = 55/92 (59.78%), Query Frame = 1 Query: 13 IGLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPD 288 +G +A LFD++R + P++ Y LI G C+ G ++ A+ + +EM + I P+ ITYT ++ G+ K G++ A ++ + M KGI PD Sbjct: 387 MGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD 478 HSP 2 Score: 23.8682 bits (50), Expect = 2.185e-12 Identity = 10/24 (41.67%), Postives = 16/24 (66.67%), Query Frame = 2 Query: 293 SLNNVFMDGHCKGGNVEEAFKVMR 364 ++ NV +DG CK GN+ +A + R Sbjct: 516 TIYNVRIDGLCKVGNLVKAIEFQR 539 HSP 3 Score: 72.0182 bits (175), Expect = 5.901e-12 Identity = 39/99 (39.39%), Postives = 53/99 (53.54%), Query Frame = 1 Query: 16 GLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT*QCLY 312 G +E A EM+K G+ PNV + AL+ G CK G +DEA L +M I PNK +YT++I C +E KL M +K I PD T + L+ Sbjct: 599 GRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALF 697
BLAST of EY727934 vs. ExPASy Swiss-Prot
Match: PP152_ARATH (Pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.193e-12 Identity = 32/90 (35.56%), Postives = 57/90 (63.33%), Query Frame = 1 Query: 28 DAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT 297 +A LF+++ +G+ P++ L+ G+C +G MD A S+L+EM ++I+P+ +TY ++ G C G +EA +L+ M +GI PD I+ Sbjct: 450 EADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 539 HSP 2 Score: 23.0978 bits (48), Expect = 2.193e-12 Identity = 14/40 (35.00%), Postives = 20/40 (50.00%), Query Frame = 3 Query: 306 SLWMGIAKEGMWKKLLK*CDRMLSEGLSLDEITYTNLIDG 425 +L G +K+G K D MLS G + +TY L+ G Sbjct: 542 TLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKG 581 HSP 3 Score: 61.6178 bits (148), Expect = 1.050e-11 Identity = 34/94 (36.17%), Postives = 51/94 (54.26%), Query Frame = 1 Query: 16 GLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT 297 G +E A DEM K+G++P Y LI G +++ AE +++E+ I + +TY I+I GYC+ GD K+A L + M GI P T Sbjct: 341 GDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFT 434 HSP 4 Score: 29.6462 bits (65), Expect = 1.050e-11 Identity = 10/21 (47.62%), Postives = 15/21 (71.43%), Query Frame = 2 Query: 302 NVFMDGHCKGGNVEEAFKVMR 364 N MDGHC GN++ AF +++ Sbjct: 471 NTLMDGHCAIGNMDRAFSLLK 491
BLAST of EY727934 vs. ExPASy Swiss-Prot
Match: PP275_ARATH (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.649e-12 Identity = 38/95 (40.00%), Postives = 54/95 (56.84%), Query Frame = 1 Query: 16 GLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQ-MDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT 297 G + DA L ++MRK G PNV CYT LI C+ + MDEA V EM + +TYT +I G+CK G + + +L+ M +KG+ P +T Sbjct: 285 GKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVT 379
BLAST of EY727934 vs. ExPASy Swiss-Prot
Match: PP238_ARATH (Putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.649e-12 Identity = 38/105 (36.19%), Postives = 59/105 (56.19%), Query Frame = 1 Query: 40 LFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT------*QCLYGWALQRRE 336 LF++M G PNV Y AL+ G C++G+ +A +L++M I PN IT+T +I + K+G + EA +L NVM + + PD T C+YG + R+ Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ 314 HSP 2 Score: 72.0182 bits (175), Expect = 5.901e-12 Identity = 36/91 (39.56%), Postives = 53/91 (58.24%), Query Frame = 1 Query: 16 GLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPD 288 G +E A +F+ MRK + N+ YT +I G CKLG++++A + + S + PN ITYT MI G+C+ G + EA L M E G P+ Sbjct: 412 GKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502 HSP 3 Score: 70.4774 bits (171), Expect = 1.717e-11 Identity = 32/91 (35.16%), Postives = 53/91 (58.24%), Query Frame = 1 Query: 16 GLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPD 288 GL+++A+ +F M + G PN YT LI G+CK ++++ + EM+ + N ITYT++I GYC +G A ++ N M+ + PD Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397
BLAST of EY727934 vs. ExPASy Swiss-Prot
Match: PP209_ARATH (Pentatricopeptide repeat-containing protein At3g02650, mitochondrial OS=Arabidopsis thaliana GN=At3g02650 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.649e-12 Identity = 37/92 (40.22%), Postives = 54/92 (58.70%), Query Frame = 1 Query: 16 GLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDS 291 G +++AK + M GL P+V YT +I GY K G MDEA+ +L E + + +TY +I GYCK+ + EA KLLN M G+ P++ Sbjct: 421 GDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNA 512
BLAST of EY727934 vs. ExPASy Swiss-Prot
Match: PP360_ARATH (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 2.836e-12 Identity = 33/94 (35.11%), Postives = 52/94 (55.32%), Query Frame = 1 Query: 16 GLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT 297 G ++ A F+ +++ GL+P+ YT LI GYC+ G + A ++ EM + +TY ++ G CK + EA KL N M E+ + PDS T Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 482 HSP 2 Score: 27.7202 bits (60), Expect = 2.836e-12 Identity = 13/36 (36.11%), Postives = 22/36 (61.11%), Query Frame = 2 Query: 278 FPQIPSLNNVFMDGHCKGGNVEEAFKVMRSYVK*RI 385 FP +L + +DGHCK GN++ A ++ + + RI Sbjct: 477 FPDSYTLT-ILIDGHCKLGNLQNAMELFQKMKEKRI 511 HSP 3 Score: 61.6178 bits (148), Expect = 8.425e-11 Identity = 31/93 (33.33%), Postives = 49/93 (52.69%), Query Frame = 1 Query: 16 GLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSI 294 GL+E+A L + M +G P V Y +I G CK G+ + A+ V EM + P+ TY ++ CK GD+ E K+ + M + + PD + Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLV 376 HSP 4 Score: 26.5646 bits (57), Expect = 8.425e-11 Identity = 11/39 (28.21%), Postives = 21/39 (53.85%), Query Frame = 3 Query: 309 LWMGIAKEGMWKKLLK*CDRMLSEGLSLDEITYTNLIDG 425 L G ++GM + + ML +G ++D +TY ++ G Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454 The following BLAST results are available for this feature:
BLAST of EY727934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 86
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY727934 ID=EY727934; Name=EY727934; organism=Citrus sinensis; type=EST; length=981bpback to top |