EY727934
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY727934 vs. ExPASy Swiss-Prot
Match: PP213_ARATH (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 2.850e-12 Identity = 31/75 (41.33%), Postives = 43/75 (57.33%), Query Frame = 1 Query: 73 PNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT 297 P+V Y ALI G+CK+ ++D+A VL M S + P+ +TY IMIG C G + A K+LN + P IT Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVIT 230 HSP 2 Score: 27.7202 bits (60), Expect = 2.850e-12 Identity = 15/32 (46.88%), Postives = 17/32 (53.12%), Query Frame = 3 Query: 330 EGMWKKLLK*CDRMLSEGLSLDEITYTNLIDG 425 EG + LK D MLS GL D TY +I G Sbjct: 241 EGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272 HSP 3 Score: 69.3218 bits (168), Expect = 1.365e-11 Identity = 35/92 (38.04%), Postives = 50/92 (54.35%), Query Frame = 1 Query: 22 IEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT 297 I+DA + D MR + P+ Y +IG C G++D A VL ++ S N P ITYTI+I G + EA KL++ M +G+ PD T Sbjct: 174 IDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265 HSP 4 Score: 21.557 bits (44), Expect = 1.365e-11 Identity = 11/37 (29.73%), Postives = 19/37 (51.35%), Query Frame = 3 Query: 309 LWMGIAKEGMWKKLLK*CDRMLSEGLSLDEITYTNLI 419 L + +G W++ K +M SE + +TY+ LI Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
BLAST of EY727934 vs. ExPASy Swiss-Prot
Match: PPR96_ARATH (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 3.459e-12 Identity = 34/108 (31.48%), Postives = 64/108 (59.26%), Query Frame = 1 Query: 16 GLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT*QCLYGWALQRREC 339 G + +A+ L+DEM K + P++ Y++LI G+C ++DEA+ + + M S + PN +TY +I G+CK ++E +L M+++G+ +++T L Q +C Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446 HSP 2 Score: 69.3218 bits (168), Expect = 6.231e-12 Identity = 34/92 (36.96%), Postives = 52/92 (56.52%), Query Frame = 1 Query: 22 IEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT 297 + DA LF EM +G+ PNV Y +LI C G+ +A +L +M I+PN +T++ +I + K G + EA KL + M ++ I PD T Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362 HSP 3 Score: 22.7126 bits (47), Expect = 6.231e-12 Identity = 10/29 (34.48%), Postives = 16/29 (55.17%), Query Frame = 2 Query: 278 FPQIPSLNNVFMDGHCKGGNVEEAFKVMR 364 FP + + N + + G CK VEE ++ R Sbjct: 392 FPNVVTYNTL-IKGFCKAKRVEEGMELFR 419
BLAST of EY727934 vs. ExPASy Swiss-Prot
Match: PP194_ARATH (Pentatricopeptide repeat-containing protein At2g39230, mitochondrial OS=Arabidopsis thaliana GN=LOJ PE=1 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 3.665e-12 Identity = 33/92 (35.87%), Postives = 51/92 (55.43%), Query Frame = 1 Query: 13 IGLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPD 288 +G + A + EM + G PNV +T+LI G+CK +MD A + EM S+ + + Y +I G+CK DMK A L + + E G+ P+ Sbjct: 603 VGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPN 694 HSP 2 Score: 28.1054 bits (61), Expect = 3.665e-12 Identity = 14/40 (35.00%), Postives = 21/40 (52.50%), Query Frame = 3 Query: 306 SLWMGIAKEGMWKKLLK*CDRMLSEGLSLDEITYTNLIDG 425 SL G G + +M+++G+S D TYT +IDG Sbjct: 700 SLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDG 739
BLAST of EY727934 vs. ExPASy Swiss-Prot
Match: PPR91_ARATH (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 3.696e-12 Identity = 32/108 (29.63%), Postives = 64/108 (59.26%), Query Frame = 1 Query: 16 GLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT*QCLYGWALQRREC 339 G + +A+ L+DEM K + P++ Y++LI G+C ++DEA+ + + M S + P+ +TY +I G+CK ++E ++ M+++G+ +++T L Q +C Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447 HSP 2 Score: 21.557 bits (44), Expect = 3.696e-12 Identity = 8/19 (42.11%), Postives = 14/19 (73.68%), Query Frame = 3 Query: 369 MLSEGLSLDEITYTNLIDG 425 M+S+G+ + +TY L+DG Sbjct: 457 MVSDGVPPNIMTYNTLLDG 475 HSP 3 Score: 65.0846 bits (157), Expect = 8.460e-11 Identity = 32/86 (37.21%), Postives = 50/86 (58.14%), Query Frame = 1 Query: 40 LFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT 297 L ++M + L P V Y +I G CK MD+A ++ +EM + I PN +TY+ +I C G +A++LL+ M E+ I+PD T Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 328 HSP 4 Score: 23.0978 bits (48), Expect = 8.460e-11 Identity = 11/34 (32.35%), Postives = 19/34 (55.88%), Query Frame = 3 Query: 327 KEGMWKKLLK*CDRMLSEGLSLDEITYTNLIDGW 428 KEG + K D M+ + +TY++LI+G+ Sbjct: 338 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
BLAST of EY727934 vs. ExPASy Swiss-Prot
Match: PPR38_ARATH (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.518e-12 Identity = 39/107 (36.45%), Postives = 63/107 (58.88%), Query Frame = 1 Query: 16 GLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT*QCLY-GWALQRR 333 G I+ A LF EM +G+ +V Y +L+ G CK G+ ++ +L++M S I PN IT+ +++ + K G ++EA +L M +GISP+ IT L G+ +Q R Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 348 HSP 2 Score: 68.1662 bits (165), Expect = 8.520e-11 Identity = 33/94 (35.11%), Postives = 55/94 (58.51%), Query Frame = 1 Query: 16 GLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT 297 G +E A +F++++K + + YT +I G CK G++++A ++ + + PN +TYT+MI G CK G + EA LL M E G +P+ T Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545
BLAST of EY727934 vs. ExPASy Swiss-Prot
Match: PP143_ARATH (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 4.775e-12 Identity = 29/94 (30.85%), Postives = 53/94 (56.38%), Query Frame = 1 Query: 16 GLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT 297 G +E A+ LF+EM+ GL+P+ Y ++I G+ K+G++D+ +EM + P+ ITY +I +CK G + + M G+ P+ ++ Sbjct: 276 GDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369 HSP 2 Score: 27.335 bits (59), Expect = 4.775e-12 Identity = 15/32 (46.88%), Postives = 20/32 (62.50%), Query Frame = 3 Query: 327 KEGMWKKLLK*CDRMLSEGLSLDEITYTNLID 422 KEGM ++ +K M GL +E TYT+LID Sbjct: 379 KEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410 HSP 3 Score: 65.0846 bits (157), Expect = 6.710e-12 Identity = 30/95 (31.58%), Postives = 51/95 (53.68%), Query Frame = 1 Query: 13 IGLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT 297 +G ++D C F+EM+ P+V Y ALI +CK G++ +EM + PN ++Y+ ++ +CK G M++A K M G+ P+ T Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT 404 HSP 4 Score: 23.8682 bits (50), Expect = 6.710e-12 Identity = 10/21 (47.62%), Postives = 14/21 (66.67%), Query Frame = 3 Query: 363 DRMLSEGLSLDEITYTNLIDG 425 + ML G+ + +TYT LIDG Sbjct: 426 NEMLQVGVEWNVVTYTALIDG 446 HSP 5 Score: 22.3274 bits (46), Expect = 6.710e-12 Identity = 7/16 (43.75%), Postives = 13/16 (81.25%), Query Frame = 2 Query: 311 MDGHCKGGNVEEAFKV 358 +D +CK GN+ +AF++ Sbjct: 409 IDANCKIGNLSDAFRL 424 HSP 6 Score: 68.1662 bits (165), Expect = 8.520e-11 Identity = 33/91 (36.26%), Postives = 52/91 (57.14%), Query Frame = 1 Query: 16 GLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPD 288 G+++ A + +MR+ GL+PN YT+LI CK+G + +A + EM + + N +TYT +I G C MKEA +L M G+ P+ Sbjct: 381 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471 HSP 7 Score: 68.1662 bits (165), Expect = 8.520e-11 Identity = 42/107 (39.25%), Postives = 59/107 (55.14%), Query Frame = 1 Query: 13 IGLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT*QCLYG---WAL 324 IG + DA L +EM + G+ NV YTALI G C +M EAE + +M + + PN +Y +I G+ K +M A +LLN + +GI PD + LYG W L Sbjct: 415 IGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL----LYGTFIWGL 517
BLAST of EY727934 vs. ExPASy Swiss-Prot
Match: PP432_ARATH (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 5.901e-12 Identity = 31/94 (32.98%), Postives = 58/94 (61.70%), Query Frame = 1 Query: 16 GLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT 297 G +++A L +EM K+G+ P++ Y+ALI G+CK+G+ A+ ++ + + + PN I Y+ +I C++G +KEA ++ M +G + D T Sbjct: 417 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT 510 HSP 2 Score: 63.929 bits (154), Expect = 6.420e-11 Identity = 30/86 (34.88%), Postives = 48/86 (55.81%), Query Frame = 1 Query: 40 LFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT 297 L +MRK + PN Y LI G+ G++ A +L EM S + PN +T+ +I G+ G+ KEA K+ +M KG++P ++ Sbjct: 285 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 370 HSP 3 Score: 24.6386 bits (52), Expect = 6.420e-11 Identity = 10/20 (50.00%), Postives = 13/20 (65.00%), Query Frame = 3 Query: 366 RMLSEGLSLDEITYTNLIDG 425 RM G+ + ITYT +IDG Sbjct: 393 RMKRNGVCVGRITYTGMIDG 412
BLAST of EY727934 vs. ExPASy Swiss-Prot
Match: PP326_ARATH (Pentatricopeptide repeat-containing protein At4g19895 OS=Arabidopsis thaliana GN=At4g19895 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.901e-12 Identity = 37/95 (38.95%), Postives = 55/95 (57.89%), Query Frame = 1 Query: 16 GLIEDAKCLFDEM-RKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT 297 G E A LF ++ R + PNV YT++IGGYCK +++ AE + M + PN TYT +I G+CK G A +L+N+M ++G P+ T Sbjct: 336 GWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYT 430
BLAST of EY727934 vs. ExPASy Swiss-Prot
Match: PP106_ARATH (Pentatricopeptide repeat-containing protein At1g64582, mitochondrial OS=Arabidopsis thaliana GN=At1g64582 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.901e-12 Identity = 34/94 (36.17%), Postives = 51/94 (54.26%), Query Frame = 1 Query: 16 GLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT 297 G + DAK FD M +G PNV Y LI G+CK +DE + Q M+ + + TY +I GYC++G ++ A + M + ++PD IT Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIIT 388 HSP 2 Score: 70.8626 bits (172), Expect = 1.315e-11 Identity = 34/94 (36.17%), Postives = 54/94 (57.45%), Query Frame = 1 Query: 16 GLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT 297 G DA + +M K + P+V +TALI + K G +DEA+ + +EM ++ PN +TY +I G C G + +A K ++MA KG P+ +T Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVT 318
BLAST of EY727934 vs. ExPASy Swiss-Prot
Match: PP103_ARATH (Pentatricopeptide repeat-containing protein At1g64100 OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 5.901e-12 Identity = 36/103 (34.95%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 28 DAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT-*QCLYGWALQRR 333 DA+ LF EM ++G+ PNV Y +I G+C G+ +A+ +L++M I+P+ +T+ +I K G + EA KL + M + I PD++T +YG+ R Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416 HSP 2 Score: 65.855 bits (159), Expect = 6.221e-12 Identity = 34/95 (35.79%), Postives = 51/95 (53.68%), Query Frame = 1 Query: 13 IGLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSIT 297 +G + A L +M + + P+V Y+A+I CK G +A+ + EM I PN TY MI G+C G +A +LL M E+ I+PD +T Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLT 368 HSP 3 Score: 26.1794 bits (56), Expect = 6.221e-12 Identity = 13/34 (38.24%), Postives = 19/34 (55.88%), Query Frame = 3 Query: 327 KEGMWKKLLK*CDRMLSEGLSLDEITYTNLIDGW 428 KEG + K CD ML + D +TY ++I G+ Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411 HSP 4 Score: 69.3218 bits (168), Expect = 1.361e-11 Identity = 34/89 (38.20%), Postives = 52/89 (58.43%), Query Frame = 1 Query: 28 DAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVLQEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSI 294 +A LFD+M + GL P V + LI G C G++ EA +++ +M +H + +TY ++ G CK+GD K A LL+ M E I PD + Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVV 297 HSP 5 Score: 21.557 bits (44), Expect = 1.361e-11 Identity = 9/22 (40.91%), Postives = 15/22 (68.18%), Query Frame = 3 Query: 369 MLSEGLSLDEITYTNLIDGWQS 434 ML +G++ + TY +IDG+ S Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCS 343 The following BLAST results are available for this feature:
BLAST of EY727934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 86
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Sequences
The
following sequences are available for this feature:
EST sequence >EY727934 ID=EY727934; Name=EY727934; organism=Citrus sinensis; type=EST; length=981bpback to top |