EY727855

Overview
NameEY727855
Unique NameEY727855
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1012
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY727855 vs. ExPASy Swiss-Prot
Match: ACTE_STRPU (Actin, cytoskeletal 3A OS=Strongylocentrotus purpuratus GN=CYIIIA PE=3 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 1.254e-89
Identity = 162/183 (88.52%), Postives = 168/183 (91.80%), Query Frame = 3 
Query:   72 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTFPIYEGLCPPHMQYFVLTLAGRD 620
            +D+  LV DNG+GMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV DSGDGVSHT PIYEG   PH     L LAGRD
Sbjct:    4 DDVAALVVDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPH-AIIRLDLAGRD 185
[Close]
BLAST of EY727855 vs. ExPASy Swiss-Prot
Match: ACTD_STRPU (Actin, cytoskeletal 2B OS=Strongylocentrotus purpuratus GN=CYIIB PE=2 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 1.254e-89
Identity = 162/183 (88.52%), Postives = 168/183 (91.80%), Query Frame = 3 
Query:   72 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTFPIYEGLCPPHMQYFVLTLAGRD 620
            +D+  LV DNG+GMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV DSGDGVSHT PIYEG   PH     L LAGRD
Sbjct:    4 DDVAALVIDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPH-AILRLDLAGRD 185
[Close]
BLAST of EY727855 vs. ExPASy Swiss-Prot
Match: ACTC_STRPU (Actin, cytoskeletal 2A OS=Strongylocentrotus purpuratus GN=CYIIA PE=2 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 1.254e-89
Identity = 162/183 (88.52%), Postives = 168/183 (91.80%), Query Frame = 3 
Query:   72 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTFPIYEGLCPPHMQYFVLTLAGRD 620
            +D+  LV DNG+GMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV DSGDGVSHT PIYEG   PH     L LAGRD
Sbjct:    4 DDVAALVVDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPH-AILRLDLAGRD 185
[Close]
BLAST of EY727855 vs. ExPASy Swiss-Prot
Match: ACT2_STRFN (Actin-15B OS=Strongylocentrotus franciscanus PE=2 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 1.254e-89
Identity = 162/183 (88.52%), Postives = 168/183 (91.80%), Query Frame = 3 
Query:   72 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTFPIYEGLCPPHMQYFVLTLAGRD 620
            +D+  LV DNG+GMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV DSGDGVSHT PIYEG   PH     L LAGRD
Sbjct:    4 DDVAALVIDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPH-AILRLDLAGRD 185
[Close]
BLAST of EY727855 vs. ExPASy Swiss-Prot
Match: ACT1_SUIBO (Actin-1 OS=Suillus bovinus GN=ACT1 PE=2 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 1.254e-89
Identity = 165/201 (82.09%), Postives = 177/201 (88.06%), Query Frame = 3 
Query:   72 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTFPIYEGLCPPHMQYFVLTLAGRDPPENFDENPSLERG*LFS 674
            E++  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPA YVAIQAVLSLYASGRTTGIV+DSGDGV+HT PIYEG   PH     L LAGRD  ++  +N  +ERG  F+
Sbjct:    3 EEVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAFYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGFALPH-AILRLDLAGRDLTDHLIKN-LIERGYSFT 201
[Close]
BLAST of EY727855 vs. ExPASy Swiss-Prot
Match: ACT1_STRFN (Actin-15A OS=Strongylocentrotus franciscanus PE=3 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 1.254e-89
Identity = 162/183 (88.52%), Postives = 168/183 (91.80%), Query Frame = 3 
Query:   72 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTFPIYEGLCPPHMQYFVLTLAGRD 620
            +D+  LV DNG+GMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV DSGDGVSHT PIYEG   PH     L LAGRD
Sbjct:    4 DDVAALVIDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPH-AILRLDLAGRD 185
[Close]
BLAST of EY727855 vs. ExPASy Swiss-Prot
Match: ACT1_HELTB (Actin CyI, cytoplasmic OS=Heliocidaris tuberculata PE=3 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 1.254e-89
Identity = 162/183 (88.52%), Postives = 168/183 (91.80%), Query Frame = 3 
Query:   72 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTFPIYEGLCPPHMQYFVLTLAGRD 620
            +D+  LV DNG+GMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV DSGDGVSHT PIYEG   PH     L LAGRD
Sbjct:    4 DDVAALVIDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPH-AILRLDLAGRD 185
[Close]
BLAST of EY727855 vs. ExPASy Swiss-Prot
Match: ACT1_HELER (Actin CyI, cytoplasmic OS=Heliocidaris erythrogramma PE=3 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 1.254e-89
Identity = 162/183 (88.52%), Postives = 168/183 (91.80%), Query Frame = 3 
Query:   72 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTFPIYEGLCPPHMQYFVLTLAGRD 620
            +D+  LV DNG+GMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV DSGDGVSHT PIYEG   PH     L LAGRD
Sbjct:    4 DDVAALVIDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPH-AILRLDLAGRD 185
[Close]
BLAST of EY727855 vs. ExPASy Swiss-Prot
Match: ACTC_XENLA (Actin, alpha cardiac muscle 1 OS=Xenopus laevis GN=actc1 PE=2 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 1.637e-89
Identity = 161/187 (86.10%), Postives = 168/187 (89.84%), Query Frame = 3 
Query:   60 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTFPIYEGLCPPHMQYFVLTLAGRD 620
            M D E+   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H  PIYEG   PH     L LAGRD
Sbjct:    1 MCDDEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPH-AIQRLDLAGRD 186
[Close]
BLAST of EY727855 vs. ExPASy Swiss-Prot
Match: ACTC_TAKRU (Actin, alpha cardiac OS=Takifugu rubripes PE=2 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 1.637e-89
Identity = 160/187 (85.56%), Postives = 168/187 (89.84%), Query Frame = 3 
Query:   60 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTFPIYEGLCPPHMQYFVLTLAGRD 620
            M D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H  PIYEG   PH     L LAGRD
Sbjct:    1 MCDDDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPH-AIMRLDLAGRD 186
The following BLAST results are available for this feature:
BLAST of EY727855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 466
Match NameE-valueIdentityDescription
ACTE_STRPU1.254e-8988.52Actin, cytoskeletal 3A OS=Strongylocentrotus purpu... [more]
ACTD_STRPU1.254e-8988.52Actin, cytoskeletal 2B OS=Strongylocentrotus purpu... [more]
ACTC_STRPU1.254e-8988.52Actin, cytoskeletal 2A OS=Strongylocentrotus purpu... [more]
ACT2_STRFN1.254e-8988.52Actin-15B OS=Strongylocentrotus franciscanus PE=2 ... [more]
ACT1_SUIBO1.254e-8982.09Actin-1 OS=Suillus bovinus GN=ACT1 PE=2 SV=1[more]
ACT1_STRFN1.254e-8988.52Actin-15A OS=Strongylocentrotus franciscanus PE=3 ... [more]
ACT1_HELTB1.254e-8988.52Actin CyI, cytoplasmic OS=Heliocidaris tuberculata... [more]
ACT1_HELER1.254e-8988.52Actin CyI, cytoplasmic OS=Heliocidaris erythrogram... [more]
ACTC_XENLA1.637e-8986.10Actin, alpha cardiac muscle 1 OS=Xenopus laevis GN... [more]
ACTC_TAKRU1.637e-8985.56Actin, alpha cardiac OS=Takifugu rubripes PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-106-E04-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727855 ID=EY727855; Name=EY727855; organism=Citrus sinensis; type=EST; length=1012bp
GCGTCCATTTTGTGCGCCTCGTAATTCGCTCGTTCTCATCTCATAACCGG
TAGCAGAAGATGGCAGACGGTGAGGATATTCAGCCACTTGTTTGTGATAA
TGGAACAGGAATGGTTAAGGCTGGGTTTGCCGGAGATGATGCTCCACGGG
CGGTGTTCCCCAGTATTGTTGGTCGTCCACGTCACACTGGTGTGATGGTT
GGCATGGGTCAGAAGGATGCGTATGTTGGTGATGAGGCTCAATCGAAGAG
AGGTATTTTGACTTTGAAATACCCCATTGAGCATGGTATTGTGAGCAACT
GGGATGACATGGAGAAGATCTGGCATCACACCTTCTACAATGAGCTTCGT
GTTGCCCCTGAAGAGCACCCTGTTCTTCTTACTGAGGCTCCTCTCAATCC
GAAGGCTAATCGCGAGAAGATGACCCAGATTATGTTTGAGACCTTTAATG
CTCCCGCTATGTATGTTGCCATCCAGGCCGTTCTTTCCTTGTATGCCAGT
GGTCGTACCACTGGTATTGTGTTGGACTCTGGTGATGGTGTCAGCCATAC
ATTTCCTATATATGAAGGGTTATGCCCTCCCCACATGCAATACTTCGTCC
TGACCTTGGCTGGCCGTGACCCTCCTGAAAACTTTGATGAAAATCCCTCA
CTGGAACGTGGGTAACTCTTTTCACCACCCCGGGCGGAACCGGGAAAATT
GGTCAGGGGAATTTAAAGGAAAAAGCTTGGTTTAAATTCCCCTTTTTGAC
ATTTAAACAAGGGAACTTGGGAACCCCCAAAAACACCACTTTCTCCCAAT
TTTAAAAAAAAAAACTTAAAAATTTTCCCCAGAGGGGGGGAGAGGTTTTA
AACCTTTTTGGGGGGTGAAAAAGGGTTTTCACGGGGGTTCCTGGGGGGGG
CCTTTTTTTTCCTCCACCCTCCCCCCTCGGGGTGGGTGGTTGGGGGAGAA
AAAGACAGGAGGGGGGGGTATCCCCCAAAAGGAAAAAACAACCTTTTTTT
TTAGACAATCTT
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