EY727843

Overview
NameEY727843
Unique NameEY727843
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length970
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY727843 vs. ExPASy Swiss-Prot
Match: CLPB_PASMU (Chaperone protein clpB OS=Pasteurella multocida GN=clpB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.235e-13
Identity = 33/45 (73.33%), Postives = 41/45 (91.11%), Query Frame = 1
Query:   13 EEGGLLTEAIRRRPFTLLLLDEIEKAHPDIFNILLQVFEDGHLTD 147
            EEGG LTEA+RRRP++++LLDE+EKAH D+FNILLQV +DG LTD
Sbjct:  656 EEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVLDDGRLTD 700          
BLAST of EY727843 vs. ExPASy Swiss-Prot
Match: CLPB_MYCTU (Chaperone protein clpB OS=Mycobacterium tuberculosis GN=clpB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.235e-13
Identity = 32/47 (68.09%), Postives = 41/47 (87.23%), Query Frame = 1
Query:   13 EEGGLLTEAIRRRPFTLLLLDEIEKAHPDIFNILLQVFEDGHLTDSH 153
            E GG LTEA+RRRP+T++L DEIEKAHPD+F++LLQV ++G LTD H
Sbjct:  659 EAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGH 705          
BLAST of EY727843 vs. ExPASy Swiss-Prot
Match: CLPB_MYCBO (Chaperone protein clpB OS=Mycobacterium bovis GN=clpB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.235e-13
Identity = 32/47 (68.09%), Postives = 41/47 (87.23%), Query Frame = 1
Query:   13 EEGGLLTEAIRRRPFTLLLLDEIEKAHPDIFNILLQVFEDGHLTDSH 153
            E GG LTEA+RRRP+T++L DEIEKAHPD+F++LLQV ++G LTD H
Sbjct:  659 EAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGH 705          
BLAST of EY727843 vs. ExPASy Swiss-Prot
Match: CLPB_LACPL (Chaperone protein clpB OS=Lactobacillus plantarum GN=clpB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.235e-13
Identity = 33/45 (73.33%), Postives = 40/45 (88.89%), Query Frame = 1
Query:   13 EEGGLLTEAIRRRPFTLLLLDEIEKAHPDIFNILLQVFEDGHLTD 147
            EEGG LTEA+RR P++++L DEIEKAHPD+FNILLQV +DG LTD
Sbjct:  659 EEGGQLTEAVRRNPYSIVLFDEIEKAHPDVFNILLQVLDDGRLTD 703          
BLAST of EY727843 vs. ExPASy Swiss-Prot
Match: CLPB_GEOSL (Chaperone protein clpB OS=Geobacter sulfurreducens GN=clpB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.235e-13
Identity = 32/45 (71.11%), Postives = 41/45 (91.11%), Query Frame = 1
Query:   13 EEGGLLTEAIRRRPFTLLLLDEIEKAHPDIFNILLQVFEDGHLTD 147
            EEGG LTEA+RRRP++++L DEIEKAHP++FN+LLQV +DG LTD
Sbjct:  663 EEGGQLTEAVRRRPYSIVLFDEIEKAHPEVFNVLLQVLDDGRLTD 707          
BLAST of EY727843 vs. ExPASy Swiss-Prot
Match: CLPB_CHRVO (Chaperone protein clpB OS=Chromobacterium violaceum GN=clpB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.235e-13
Identity = 31/45 (68.89%), Postives = 41/45 (91.11%), Query Frame = 1
Query:   13 EEGGLLTEAIRRRPFTLLLLDEIEKAHPDIFNILLQVFEDGHLTD 147
            EEGG LTE +RR+P++++LLDE+EKAHPD+FN+LLQV +DG LTD
Sbjct:  661 EEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTD 705          
BLAST of EY727843 vs. ExPASy Swiss-Prot
Match: CLPB_CAUCR (Chaperone protein clpB OS=Caulobacter crescentus GN=clpB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.235e-13
Identity = 33/45 (73.33%), Postives = 40/45 (88.89%), Query Frame = 1
Query:   13 EEGGLLTEAIRRRPFTLLLLDEIEKAHPDIFNILLQVFEDGHLTD 147
            +EGG LTEAIRRRP+ ++L DEIEKAHPD+FN+LLQV +DG LTD
Sbjct:  655 DEGGALTEAIRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTD 699          
BLAST of EY727843 vs. ExPASy Swiss-Prot
Match: CLPB_BACTN (Chaperone protein clpB OS=Bacteroides thetaiotaomicron GN=clpB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.235e-13
Identity = 33/46 (71.74%), Postives = 42/46 (91.30%), Query Frame = 1
Query:   13 EEGGLLTEAIRRRPFTLLLLDEIEKAHPDIFNILLQVFEDGHLTDS 150
            +EGG LTEAIRR+P++++L DEIEKAHPD+FNILLQV +DG LTD+
Sbjct:  655 DEGGQLTEAIRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDN 700          
BLAST of EY727843 vs. ExPASy Swiss-Prot
Match: CLPB_BACCR (Chaperone protein clpB OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=clpB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.235e-13
Identity = 32/46 (69.57%), Postives = 43/46 (93.48%), Query Frame = 1
Query:   13 EEGGLLTEAIRRRPFTLLLLDEIEKAHPDIFNILLQVFEDGHLTDS 150
            EEGG LTEA+RR+P++++LLDEIEKAHP++FNILLQ+ +DG +TDS
Sbjct:  663 EEGGQLTEAVRRKPYSVVLLDEIEKAHPEVFNILLQMLDDGRITDS 708          
BLAST of EY727843 vs. ExPASy Swiss-Prot
Match: CLPB1_ANASP (Chaperone protein clpB 1 OS=Anabaena sp. (strain PCC 7120) GN=clpB1 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.235e-13
Identity = 32/46 (69.57%), Postives = 42/46 (91.30%), Query Frame = 1
Query:   13 EEGGLLTEAIRRRPFTLLLLDEIEKAHPDIFNILLQVFEDGHLTDS 150
            EEGG L+EA+RR P++++LLDE+EKAHPD+FNILLQV +DG +TDS
Sbjct:  666 EEGGQLSEAVRRHPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDS 711          
The following BLAST results are available for this feature:
BLAST of EY727843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 162
Match NameE-valueIdentityDescription
CLPB_PASMU5.235e-1373.33Chaperone protein clpB OS=Pasteurella multocida GN... [more]
CLPB_MYCTU5.235e-1368.09Chaperone protein clpB OS=Mycobacterium tuberculos... [more]
CLPB_MYCBO5.235e-1368.09Chaperone protein clpB OS=Mycobacterium bovis GN=c... [more]
CLPB_LACPL5.235e-1373.33Chaperone protein clpB OS=Lactobacillus plantarum ... [more]
CLPB_GEOSL5.235e-1371.11Chaperone protein clpB OS=Geobacter sulfurreducens... [more]
CLPB_CHRVO5.235e-1368.89Chaperone protein clpB OS=Chromobacterium violaceu... [more]
CLPB_CAUCR5.235e-1373.33Chaperone protein clpB OS=Caulobacter crescentus G... [more]
CLPB_BACTN5.235e-1371.74Chaperone protein clpB OS=Bacteroides thetaiotaomi... [more]
CLPB_BACCR5.235e-1369.57Chaperone protein clpB OS=Bacillus cereus (strain ... [more]
CLPB1_ANASP5.235e-1369.57Chaperone protein clpB 1 OS=Anabaena sp. (strain P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-106-D03-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727843 ID=EY727843; Name=EY727843; organism=Citrus sinensis; type=EST; length=970bp
CCACGCGTCCGTGAAGAGGGAGGTCTTCTTACGGAAGCTATTAGAAGACG
GCCATTTACGTTGTTGTTGCTAGATGAAATAGAGAAAGCACATCCAGATA
TATTTAACATCCTCCTCCAAGTGTTTGAAGATGGCCACCTAACTGATTCT
CATGTTAGTGGATGGTGTTCACACTTGTATCAGAAATTGTAGAAAAATAT
CTTAAAACAAATTTTTTCCTAGTGAATTATTTTGTTCCTTGATTATTATC
AACTGTCAAGTCTCTAACCCTGTATTGGGTTAACAGGGTCGGAGAGTATC
TTTCAAGAATGCATTGATAGTCATGACTTCAAATGTGGGATCTACGACAA
TTGCAAAGGGCAGACATGGCTCTATTGGGTTCTTGCTTGAAGATAATGAA
GTCAACTTCATATGCTGGAATGAAGACACTCGTAGTTGAGGAGCTTAAGG
CATATTTTCGTCCAGAGTTACTTTAAAAGGATAGATGAAGTGGTCGTCTT
TTCGGGTCCCTTGAAAAAGGCTCAGGTTTGTCAACTTCCCTTTGATTTGA
GCATAATCCATGGATTGGCATAAAGTTGTTACCCCTCCACCCCCTTTAAT
TTTTGTTATCCTTGCATTTTAAATGGATTAATTTTTAAGGCTACTGGAGT
TCCCCAAGTTTCCAATTAAACAACCTAATTTGTGAAAAAACTTTGTTTTT
TTTTTGAATGGACCCTTCCCCCTTTCCAAAATGGGGAAAGGGAACAAATG
CCAGTTTTTTTTTCCAAAAACTTGGAAATTTTTGAGATTATAAGCCTCGA
AAAAAAGTGGAAAGAGAAAAGCTAAAATCCCCCAAGGATTTTGAGAAAGG
GAGAGGGTCCAAAATCCAAAAAAAAAATTTTCAATAAACCAAACAAAAGT
TTATAAACCACCAAAATTAAGGAGAACCCACAGCCTCCCTTTTGAGAGAA
AAATTTTATTTATTTTATAT
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