EY727838

Overview
NameEY727838
Unique NameEY727838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length981
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY727838 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.483e-39
Identity = 79/118 (66.95%), Postives = 95/118 (80.51%), Query Frame = 2
Query:   47 QGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAA 400
            + AMGT+D IIDT+SA H ++PLLGLLK  GKLV VG P KPLEL V  L+ GRK + GS+ GGMKETQEM+DF  KHNITADIE+I M  +NTAMERL KADV+YRFVID+AN+ ++
Sbjct:  241 KAAMGTMDYIIDTISAAHSLMPLLGLLKLNGKLVTVGLPSKPLELSVFPLVAGRKLIGGSNIGGMKETQEMLDFCGKHNITADIELIKMHEINTAMERLHKADVKYRFVIDVANSFSS 358          
BLAST of EY727838 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 2.141e-38
Identity = 75/119 (63.03%), Postives = 98/119 (82.35%), Query Frame = 2
Query:   47 QGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAAT 403
            + A GT+D IIDT+SAVH ++ LLGLLK  GKLV VG P KPL+LP+  L+ GRK + GS+ GG+KETQEM+DF  KHNI A+IE+I MD +NTA+ERL+KADV+YRFVID+AN+L+++
Sbjct:  234 KAATGTMDYIIDTISAVHSLVSLLGLLKLNGKLVTVGLPSKPLQLPIFPLVAGRKLIGGSNFGGLKETQEMLDFCGKHNIAANIELIKMDEINTAIERLSKADVKYRFVIDVANSLSSS 352          
BLAST of EY727838 vs. ExPASy Swiss-Prot
Match: CADH2_ARATH (Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.063e-37
Identity = 75/114 (65.79%), Postives = 94/114 (82.46%), Query Frame = 2
Query:   53 AMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 394
            A+GT+D IIDTVSA H +LPL  LLK  GKLV +G P+KPL+LP+ SL++GRK V GS  GGMKETQEM++F AKH I +DIE+I M  +N+AM+RLAK+DVRYRFVID+AN+L
Sbjct:  240 AVGTMDFIIDTVSAEHALLPLFSLLKVNGKLVALGLPEKPLDLPIFSLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRLAKSDVRYRFVIDVANSL 353          
BLAST of EY727838 vs. ExPASy Swiss-Prot
Match: CADH5_ORYSJ (Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 2.368e-37
Identity = 79/114 (69.30%), Postives = 93/114 (81.58%), Query Frame = 2
Query:   53 AMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 394
            A GT+DGII+TVSA  PI PLLGLLK  GK++LVG P+KP+E+P  +L+   KT++GS  GGM +T EMID AAKH +TA+IEVI  DYVNTAMERLAKADVRYRFVIDI NTL
Sbjct:  237 ATGTMDGIINTVSANIPIAPLLGLLKPNGKMILVGLPEKPMEIPPFALVASNKTLAGSCIGGMADT-EMIDLAAKHGVTAEIEVIGADYVNTAMERLAKADVRYRFVIDIGNTL 349          
BLAST of EY727838 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.535e-36
Identity = 75/118 (63.56%), Postives = 93/118 (78.81%), Query Frame = 2
Query:   47 QGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAA 400
            + A  T+DG+I+TVSA  P+ P L LLK  GK++LVG P+ PLE+P  SL+ G +T++GS+ GGM +TQEMI+ AAKH +TADIEVI  D VNTAMERLAKADVRYRFVID+ NTL A
Sbjct:  245 EAARSTMDGVINTVSANTPMAPYLALLKPNGKMILVGLPENPLEVPPFSLVHGNRTLAGSNIGGMADTQEMIELAAKHGVTADIEVIGADDVNTAMERLAKADVRYRFVIDVGNTLHA 362          
BLAST of EY727838 vs. ExPASy Swiss-Prot
Match: CADH3_ARATH (Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.697e-35
Identity = 72/114 (63.16%), Postives = 91/114 (79.82%), Query Frame = 2
Query:   53 AMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 394
            A+GT+D IIDTVSA H +LPL  LLK  GKLV +G  +KPL+LP+  L++GRK V GS  GGMKETQEM++F AKH I +DIE+I M  +N+AM+RL K+DVRYRFVID+AN+L
Sbjct:  239 AVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLLEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRLVKSDVRYRFVIDVANSL 352          
BLAST of EY727838 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.588e-33
Identity = 69/120 (57.50%), Postives = 93/120 (77.50%), Query Frame = 2
Query:   47 QGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAATK 406
            + A GT+DGIIDTVSAVH + PL+ LL++ G+LV VG+P KP++L +  L    K+V+GS  GGM++TQEM+DFA +H + A++EVI M+ VN AMERL K DVRYRFVID+ANT+A  +
Sbjct:  243 KAAAGTMDGIIDTVSAVHDLTPLITLLRTHGQLVPVGSPGKPVQLALYPLQSDGKSVAGSMIGGMRDTQEMVDFAVEHGVAAEVEVIGMEDVNGAMERLQKGDVRYRFVIDVANTMARAR 362          
BLAST of EY727838 vs. ExPASy Swiss-Prot
Match: CAD8B_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 2.709e-33
Identity = 65/113 (57.52%), Postives = 88/113 (77.88%), Query Frame = 2
Query:   53 AMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANT 391
            A GT+DGI++TVSA HP+ PL  L+K   ++V VGAP +PLELP  +++ G K ++G+  GG+++ Q M+DFA +H ITA++EVI MDYVNTAMERL K DVRYRFVID+A +
Sbjct:  314 AAGTMDGILNTVSAWHPVAPLFALMKPMAQMVFVGAPTRPLELPAYAIVPGGKGITGNCVGGIRDCQAMLDFAGEHGITAEVEVIKMDYVNTAMERLEKNDVRYRFVIDVAGS 426          
BLAST of EY727838 vs. ExPASy Swiss-Prot
Match: CADH6_ORYSJ (Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CAD6 PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 3.538e-33
Identity = 70/112 (62.50%), Postives = 87/112 (77.68%), Query Frame = 2
Query:   47 QGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDI 382
            Q    +LD IIDTV+A H + P+L LLK  GKLVLVGAP+KP+ELP   LI G++TVSGS TGGMKETQEM+D   +HNIT DIE++S D +N A+ RLA+ DVRYRFVI++
Sbjct:  243 QAMTRSLDYIIDTVAATHSLGPILELLKVNGKLVLVGAPEKPVELPSFPLIFGKRTVSGSMTGGMKETQEMMDICGEHNITCDIEIVSTDRINDALARLARNDVRYRFVINV 354          
BLAST of EY727838 vs. ExPASy Swiss-Prot
Match: CADH7_ORYSJ (Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CAD7 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.344e-32
Identity = 69/116 (59.48%), Postives = 88/116 (75.86%), Query Frame = 2
Query:   47 QGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 394
            + AMGT+ GII+T SA   +   L LLK +GK++LVG P+KPL++P  +L+ G K ++GS  G + ETQEMIDFAA+H + ADIE+I  D VNTAMERLAK DVRYRFV+DI NTL
Sbjct:  261 KAAMGTMHGIINTASASTSMHSYLALLKPKGKMILVGLPEKPLQIPTFALVGGGKILAGSCMGSISETQEMIDFAAEHGVAADIELIGADEVNTAMERLAKGDVRYRFVVDIGNTL 376          
The following BLAST results are available for this feature:
BLAST of EY727838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
MTDH_MEDSA1.483e-3966.95Probable mannitol dehydrogenase OS=Medicago sativa... [more]
MTDH1_STYHU2.141e-3863.03Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
CADH2_ARATH1.063e-3765.79Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis th... [more]
CADH5_ORYSJ2.368e-3769.30Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza... [more]
CADH3_ORYSJ1.535e-3663.56Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]
CADH3_ARATH1.697e-3563.16Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis th... [more]
CADH9_ORYSJ1.588e-3357.50Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza... [more]
CAD8B_ORYSJ2.709e-3357.52Probable cinnamyl alcohol dehydrogenase 8B OS=Oryz... [more]
CADH6_ORYSJ3.538e-3362.50Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza... [more]
CADH7_ORYSJ1.344e-3259.48Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-106-C10-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727838 ID=EY727838; Name=EY727838; organism=Citrus sinensis; type=EST; length=981bp
GACCCGGGGTCGGGGATTCCCGGGTCGACCACGCGTCCGACTTCATCAGG
GTGCCATGGGCACATTGGATGGTATTATTGACACGGTGTCCGCTGTGCAC
CCCATTTTGCCATTGCTCGGTCTATTAAAGTCCCAGGGCAAGCTTGTTCT
GGTTGGTGCTCCGGACAAGCCACTCGAGCTACCTGTGATTTCCTTAATTA
TGGGGAGGAAGACGGTGTCAGGGAGCAGCACTGGGGGAATGAAAGAGACG
CAAGAGATGATTGATTTTGCAGCAAAACACAATATAACAGCTGACATTGA
GGTTATTTCGATGGATTATGTCAATACGGCAATGGAGCGGCTCGCCAAGG
CTGATGTTCGGTATCGATTTGTCATTGATATTGCAAACACCTTGGCCGCC
ACCAAACCTTGAAGAATCAGAATCAGAATCAGATTGGTGTCTTCAATTCA
CAACTTTGTTCCATGATCCACTTTGCTATATGTAATGCTCCCTCGATCAT
TACACTCTTTTAGCGCTTAAATTACTTTTAATTTTCCGTTACCTCACCCT
AATTATGTCGTGATTGCCCAAAAACTATAAATGTTATTGAAAATAAAACA
TTGTTCCTTTTACACCAATTATATTAAATTTAAAAAAAAAAGAAGAAAAG
AGGATAATAAAAAATAAAAAAATAAATTACGCTAGAACTGACGATAGCTA
CAATGTGAAAGAGGAATAGAAAAAAGAAAATAGATAGGGGGGGGCGCCCC
CCAAAAGAAACTAATTATAATTTCGCGGGGGGGGCGGACCAAATAAATTC
TCTTAAAAAAGGAGGCCCAAAAAATTTTTAATGCGGGGGGGCCCTATTTT
AAAAAACAACTTGGTGGAGGGAGAAAAAACCACGGGGGGTATACCACACC
ATTATATCCTCTACGGAACCAAACCACCCCCACTTTTTCTCACCGCGGGG
GGGGAAAGAAAAAAAAAAAAAAGAAAAGTCC
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