EY727823

Overview
NameEY727823
Unique NameEY727823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length968
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY727823 vs. ExPASy Swiss-Prot
Match: IAA12_ARATH (Auxin-responsive protein IAA12 OS=Arabidopsis thaliana GN=IAA12 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.845e-27
Identity = 78/171 (45.61%), Postives = 95/171 (55.56%), Query Frame = 2
Query:   62 QVVGWPPIRSFRKNSLATTSK----------------NNDE---VDGKPGP---GALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEK 508
            QVVGWPPI   R NSL                      NDE   V  K  P   G  F+KV+MDG    RKVD+R +++Y  L+  LE+MF   T   C       RE +   +L D    S++VLTYEDK+GDWMLVGDVPW MFI+S KRL+IM  S+A GLAPR  E+
Sbjct:   69 QVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELKDVSMKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTC-------REKVKPLRLLD--GSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAPRRQEQ 230          
BLAST of EY727823 vs. ExPASy Swiss-Prot
Match: IAA13_ARATH (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana GN=IAA13 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 6.339e-27
Identity = 82/177 (46.33%), Postives = 99/177 (55.93%), Query Frame = 2
Query:   62 QVVGWPPIRSFRKNSL----ATTSKNNDE------------------VDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMF---SCFTIGQCGSHEAPGREMLSESKLKDLLHGS-EYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSK 514
            QVVGWPPI S R NSL    AT S   +E                  V+GK   G  FIKV+MDG    RKVDL  +++Y  L+  LE MF   +  T+G       P R          LL GS E+VLTYEDK+GDWMLVGDVPW MFI+S KRL++MK S+A GLA R  E ++
Sbjct:   76 QVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVG--FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLR----------LLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEPNE 240          
BLAST of EY727823 vs. ExPASy Swiss-Prot
Match: IAA6_ARATH (Auxin-responsive protein IAA6 OS=Arabidopsis thaliana GN=IAA6 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 1.081e-26
Identity = 65/141 (46.10%), Postives = 84/141 (59.57%), Query Frame = 2
Query:   62 QVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIG 484
            Q VGWPP+ S+R+       KNN+E     G    ++KVSMDG PY+RK+DL +  +Y  L + LE +F C  IG           +  E K        EY++ YEDKD DWMLVGDVPW+MF +SCKRL+I+K SDA G
Sbjct:   70 QAVGWPPVCSYRRK------KNNEEASKAIG----YVKVSMDGVPYMRKIDLGSSNSYINLVTVLENLFGCLGIG-----------VAKEGKK------CEYIIIYEDKDRDWMLVGDVPWQMFKESCKRLRIVKRSDATG 183          
BLAST of EY727823 vs. ExPASy Swiss-Prot
Match: IAA11_ARATH (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana GN=IAA11 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.409e-26
Identity = 72/159 (45.28%), Postives = 93/159 (58.49%), Query Frame = 2
Query:   62 QVVGWPPIRSFRKNSLATTSK---------------NNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSE-YVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLA 490
            QVVGWPPIR++R NS+   +K               N +  D      ++F+KV+MDG P  RK+DL  +  Y  LS+ LE+MF    +G   + E  G     E+ +K L  GS   VLTYEDK+GDWMLVGDVPW MFI S +RL+IMK S+A G A
Sbjct:   88 QVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGS-RTLETDGH---METPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATGKA 242          
BLAST of EY727823 vs. ExPASy Swiss-Prot
Match: IAA5_ARATH (Auxin-responsive protein IAA5 OS=Arabidopsis thaliana GN=IAA5 PE=2 SV=3)

HSP 1 Score: 117.087 bits (292), Expect = 1.561e-25
Identity = 65/138 (47.10%), Postives = 80/138 (57.97%), Query Frame = 2
Query:   62 QVVGWPPIRSFR-KNSLATTSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGS 472
            QVVGWPP+ S+R KNSL  T  +             ++KVS+DGA +LRK+DL  Y  Y +L+SAL+ +F C+                      D L  SE V  YEDKDGDWML GDVPWEMF+ SCKRL+IMK S
Sbjct:   53 QVVGWPPVCSYRRKNSLERTKSS-------------YVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYI------------------NFDDTLKESECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMKRS 159          
BLAST of EY727823 vs. ExPASy Swiss-Prot
Match: IAA2_ORYSJ (Auxin-responsive protein IAA2 OS=Oryza sativa subsp. japonica GN=IAA2 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.663e-25
Identity = 59/152 (38.82%), Postives = 87/152 (57.24%), Query Frame = 2
Query:   65 VVGWPPIRSFRKNSLATTSKNNDEVDGKPGPG---------------ALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSD 475
            VVGWPP+RSFR+N  +++S ++ +    P                   +F+K++MDG P  RKVDL  Y  Y +LS+A++K+F     G   +  A        +   +++ G EY L YED +GD MLVGDVPW+MFI + KRL+++K SD
Sbjct:   71 VVGWPPVRSFRRNLASSSSSSSKQAPPPPSSSPQNGDKASKDGGAEKGMFVKINMDGVPIGRKVDLAAYGGYAQLSAAVDKLFR----GLLAAQSAAADGEADAAAAGEMVGGGEYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSD 218          
BLAST of EY727823 vs. ExPASy Swiss-Prot
Match: IAA18_ORYSJ (Auxin-responsive protein IAA18 OS=Oryza sativa subsp. japonica GN=IAA18 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.749e-25
Identity = 70/158 (44.30%), Postives = 93/158 (58.86%), Query Frame = 2
Query:   65 VVGWPPIRSFRKNSLATTS------KNNDEVDGKPGPGAL---FIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKL-KDLLHGSE-YVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGS----DAIGLAP 493
            VVGWPPIRSFR+N    +S      + NDE D K  P       +K++MDG P  RKVDL+ Y +Y +LSSA+E++F  F   Q     A   E  +E K+   LL G+  Y L YED DGD ML GD+PW++F+ + KRL++M+ S    D IG  P
Sbjct:  168 VVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYEDNDGDRMLAGDIPWKVFVSTVKRLRVMRRSELPHDMIGADP 325          
BLAST of EY727823 vs. ExPASy Swiss-Prot
Match: IAA16_ORYSJ (Auxin-responsive protein IAA16 OS=Oryza sativa subsp. japonica GN=IAA16 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.749e-25
Identity = 66/167 (39.52%), Postives = 94/167 (56.29%), Query Frame = 2
Query:   65 VVGWPPIRSFRKNSLATTSKNNDEVDGKP-------GPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCF-------TIGQCGSHEAPGREMLSESK-LKDLLHGS--EYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSK 514
            VVGWPP+RSFR+N  +++S +     G+        G  A F+KV+MDG P  RKVDL  +  YGELS+A++++F          T+    +  A G     E + +  LL G   EY L YED +GD MLVGDVPW MFI + +RL++++ SD      RA  + +
Sbjct:   58 VVGWPPVRSFRRNLASSSSSSKPPRGGRDAAAAATGGKVARFVKVNMDGVPIGRKVDLAAHGGYGELSAAVDRLFRGLLAAQRDPTMATAAAAAAAGESCTGEEEAIAGLLDGGSGEYTLVYEDDEGDQMLVGDVPWNMFIAAARRLRVLRSSDLNASTIRAGSRKR 224          
BLAST of EY727823 vs. ExPASy Swiss-Prot
Match: IAA26_ARATH (Auxin-responsive protein IAA26 OS=Arabidopsis thaliana GN=IAA26 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.726e-24
Identity = 64/153 (41.83%), Postives = 87/153 (56.86%), Query Frame = 2
Query:   65 VVGWPPIRSFRKNSLATTSKN-----------NDEVDGKPG----PGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGS-EYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSD 475
            VVGWPP+RSFRKN  +T+S             N   DG+         +F+K++MDG P  RKVDL  Y +Y +LS  ++K+F      Q    +  G E      +  LL G  E+ LTYED +GD MLVGDVPW+MF+ S KRL+++K S+
Sbjct:  104 VVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEKQVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEE----KPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSE 252          
BLAST of EY727823 vs. ExPASy Swiss-Prot
Match: IAA15_ARATH (Auxin-responsive protein IAA15 OS=Arabidopsis thaliana GN=IAA15 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.255e-24
Identity = 62/142 (43.66%), Postives = 85/142 (59.86%), Query Frame = 2
Query:   62 QVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGL 487
            Q+VGWPP+ + RK    T  +              ++KV++DGA YLRKVDL  Y  YG+L +ALE MF               + +++  ++ +L    E+V TYEDKDGD MLVGDVPW MF++SCKR+++MK  DAIGL
Sbjct:   70 QLVGWPPVATARK----TVRRK-------------YVKVALDGAAYLRKVDLGMYDCYGQLFTALENMF---------------QGIITICRVTELERKGEFVATYEDKDGDLMLVGDVPWMMFVESCKRMRLMKTGDAIGL 179          
The following BLAST results are available for this feature:
BLAST of EY727823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
IAA12_ARATH2.845e-2745.61Auxin-responsive protein IAA12 OS=Arabidopsis thal... [more]
IAA13_ARATH6.339e-2746.33Auxin-responsive protein IAA13 OS=Arabidopsis thal... [more]
IAA6_ARATH1.081e-2646.10Auxin-responsive protein IAA6 OS=Arabidopsis thali... [more]
IAA11_ARATH2.409e-2645.28Auxin-responsive protein IAA11 OS=Arabidopsis thal... [more]
IAA5_ARATH1.561e-2547.10Auxin-responsive protein IAA5 OS=Arabidopsis thali... [more]
IAA2_ORYSJ2.663e-2538.82Auxin-responsive protein IAA2 OS=Oryza sativa subs... [more]
IAA18_ORYSJ7.749e-2544.30Auxin-responsive protein IAA18 OS=Oryza sativa sub... [more]
IAA16_ORYSJ7.749e-2539.52Auxin-responsive protein IAA16 OS=Oryza sativa sub... [more]
IAA26_ARATH1.726e-2441.83Auxin-responsive protein IAA26 OS=Arabidopsis thal... [more]
IAA15_ARATH2.255e-2443.66Auxin-responsive protein IAA15 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-106-B04-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727823 ID=EY727823; Name=EY727823; organism=Citrus sinensis; type=EST; length=968bp
CCCGCGTCCGCACAAGGCATCTGCTTCTAACAACAACATGAGTGCACCTG
CTGCCAAGGCACAGGTCGTGGGTTGGCCTCCAATAAGATCATTTAGGAAG
AATTCATTGGCAACCACTTCAAAGAACAATGATGAAGTAGATGGAAAACC
AGGTCCTGGTGCTCTTTTTATTAAGGTTAGCATGGACGGGGCTCCTTATT
TGAGGAAGGTAGATTTGAGAACATACACCAATTATGGGGAACTATCTTCT
GCTCTGGAGAAGATGTTCAGTTGCTTTACAATTGGTCAATGTGGATCACA
TGAAGCACCAGGGAGGGAAATGCTGAGTGAGAGCAAGTTGAAGGATCTTT
TGCATGGATCAGAATATGTGCTTACATATGAGGACAAGGATGGTGACTGG
ATGCTCGTTGGGGATGTGCCGTGGGAGATGTTTATTGATTCATGCAAGCG
ATTAAAGATCATGAAAGGTTCTGATGCCATTGGCTTAGCTCCCAGGGCAA
TGGAAAAATCCAAGATCANGAACTAGTGAATGTCTGTCTGGGAGGGGGTG
CCTTCTAGTTCATGCCTTTCATGGGTAGGAAGAAGACTGGGTTGAAGAAA
ATTTAAAAAAGGACGGGAGGCATGGGGCAAAATGAAATTTTGGGGTTTAT
TTTGGAATCCTGGTTTGTTTTACTGAGGGTTTGTGGTTATTTTTTTAAAT
TTGGGAAAAAATTCCTTGGTTTATGAAAAGATTTGGTTTAAAAACCCAGG
GTTAAAAACCTAAAAAAAAATTAAGGATTCCGGGGGAGTTTATTTTTTCT
TATTTGAGGAGGGGGGGATTTTAATTTTGGTTAATGGAAATTTTTATCGG
AAATTAAACCTTAAGGGGGTTTTTTTTCATTACCCTTTCCACAACAGAAA
GGTGAAATCTTTCCCCACTCTGCTGAAACACCAAAACCGTAGACAGAAAC
AACTTAAAATACACAGAC
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