EY754041

Overview
NameEY754041
Unique NameEY754041
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length803
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY754041 vs. ExPASy Swiss-Prot
Match: HIS7_STRGG (Imidazoleglycerol-phosphate dehydratase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=hisB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.896e-13
Identity = 37/70 (52.86%), Postives = 48/70 (68.57%), Query Frame = 1
Query:  313 SGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASLGLFDVPVRATGDIPIGDHPAHED 522
            S R+G V+R TKET+V V+IN+DG+G  D +T + F DHMLDQL   GLFD+ V+  GD+ I  H   ED
Sbjct:    2 SPRVGRVERTTKETSVLVEINLDGTGKVDVATGVGFYDHMLDQLGRHGLFDLTVKTEGDLHIDTHHTIED 71          
BLAST of EY754041 vs. ExPASy Swiss-Prot
Match: HIS7_STRAW (Imidazoleglycerol-phosphate dehydratase OS=Streptomyces avermitilis GN=hisB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.896e-13
Identity = 37/68 (54.41%), Postives = 47/68 (69.12%), Query Frame = 1
Query:  319 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASLGLFDVPVRATGDIPIGDHPAHED 522
            R+G V+R TKET+V V+I++DGSG  D ST + F DHMLDQL   GLFD+ V+  GD+ I  H   ED
Sbjct:    3 RVGRVERTTKETSVLVEIDLDGSGKVDVSTGVGFYDHMLDQLGRHGLFDLTVKTEGDLHIDSHHTIED 70          
BLAST of EY754041 vs. ExPASy Swiss-Prot
Match: HIS7_SYNP6 (Imidazoleglycerol-phosphate dehydratase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=hisB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.088e-13
Identity = 54/156 (34.62%), Postives = 71/156 (45.51%), Query Frame = 1
Query:  319 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASLGLFDVPVRATGDIPIGDHPAHEDXXXXXXXXXXXXSW*WARN*SGW*FYSFSC*ALVHVLSGFFGPPPFILDLVLPARGVVCFDTLLGGPFFRLLGDTFGCALLFRSVAGV 786
            R   V R T ET+V V +N+DG+G   + T IPFLDHM DQ+AS GL D+ + A GD+ I DH  +ED                        F +    ALV V   F G P     L LP   V  ++T L   FF  + +     L  R + G+
Sbjct:   16 RQATVSRRTGETDVQVFLNLDGTGRCQADTGIPFLDHMFDQIASHGLIDLEITAKGDLHIDDHHTNEDVGITFGLALAEALGDRKGIVRFGHFVAPLDEALVQVALDFSGRPHLTYGLTLPTERVGTYETQLVREFFVAIANNAKLTLHLRQLDGI 171          
BLAST of EY754041 vs. ExPASy Swiss-Prot
Match: HIS7_SYNE7 (Imidazoleglycerol-phosphate dehydratase OS=Synechococcus elongatus (strain PCC 7942) GN=hisB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.088e-13
Identity = 54/156 (34.62%), Postives = 71/156 (45.51%), Query Frame = 1
Query:  319 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASLGLFDVPVRATGDIPIGDHPAHEDXXXXXXXXXXXXSW*WARN*SGW*FYSFSC*ALVHVLSGFFGPPPFILDLVLPARGVVCFDTLLGGPFFRLLGDTFGCALLFRSVAGV 786
            R   V R T ET+V V +N+DG+G   + T IPFLDHM DQ+AS GL D+ + A GD+ I DH  +ED                        F +    ALV V   F G P     L LP   V  ++T L   FF  + +     L  R + G+
Sbjct:   16 RQATVSRRTGETDVQVFLNLDGTGRCQADTGIPFLDHMFDQIASHGLIDLEITAKGDLHIDDHHTNEDVGITFGLALAEALGDRKGIVRFGHFVAPLDEALVQVALDFSGRPHLTYGLTLPTERVGTYETQLVREFFVAIANNAKLTLHLRQLDGI 171          
BLAST of EY754041 vs. ExPASy Swiss-Prot
Match: HIS7_RHOFD (Imidazoleglycerol-phosphate dehydratase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=hisB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.088e-13
Identity = 39/77 (50.65%), Postives = 50/77 (64.94%), Query Frame = 1
Query:  292 STSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASLGLFDVPVRATGDIPIGDHPAHED 522
            ST  A+   R  EV R T ET ++VK+N+DGSG +  ST I F DHMLDQ+A  GL D+ ++ATGD+ I  H   ED
Sbjct:    2 STPIALVPARTAEVTRNTAETRITVKVNLDGSGQSHLSTGIGFFDHMLDQIARHGLIDLDIQATGDLHIDGHHTVED 78          
BLAST of EY754041 vs. ExPASy Swiss-Prot
Match: HIS7_RALEH (Imidazoleglycerol-phosphate dehydratase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=hisB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.088e-13
Identity = 36/68 (52.94%), Postives = 46/68 (67.65%), Query Frame = 1
Query:  319 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASLGLFDVPVRATGDIPIGDHPAHED 522
            R+ EV R T ET + V +N+DGSG    ++ +PFLDHMLDQ+A  G+FD+ V ATGD  I DH   ED
Sbjct:    2 RVAEVTRNTSETQIRVSLNLDGSGRQKLASGVPFLDHMLDQIARHGMFDLEVEATGDTHIDDHHTVED 69          
BLAST of EY754041 vs. ExPASy Swiss-Prot
Match: HIS7_POLNA (Imidazoleglycerol-phosphate dehydratase OS=Polaromonas naphthalenivorans (strain CJ2) GN=hisB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.088e-13
Identity = 37/79 (46.84%), Postives = 52/79 (65.82%), Query Frame = 1
Query:  286 SASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASLGLFDVPVRATGDIPIGDHPAHED 522
            + ST++++ + R  EV R T ET ++VK+N+DG+G A  ST I F DHMLDQ+A  GL D+ + A GD+ I  H   ED
Sbjct:    2 TTSTAASLPAPRTAEVSRNTAETKITVKLNLDGTGQASLSTGIGFFDHMLDQIARHGLIDLDIHAVGDLHIDGHHTVED 80          
BLAST of EY754041 vs. ExPASy Swiss-Prot
Match: HIS7_CUPTR (Imidazoleglycerol-phosphate dehydratase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=hisB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.088e-13
Identity = 36/68 (52.94%), Postives = 46/68 (67.65%), Query Frame = 1
Query:  319 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASLGLFDVPVRATGDIPIGDHPAHED 522
            R+ EV R T ET + V +N+DGSG    ++ +PFLDHMLDQ+A  G+FD+ V ATGD  I DH   ED
Sbjct:    2 RVAEVTRNTSETQIRVSLNLDGSGRQKLASGVPFLDHMLDQIARHGMFDLEVEATGDTHIDDHHTVED 69          
BLAST of EY754041 vs. ExPASy Swiss-Prot
Match: HIS7_SYNJB (Imidazoleglycerol-phosphate dehydratase OS=Synechococcus sp. GN=hisB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.645e-13
Identity = 55/167 (32.93%), Postives = 80/167 (47.90%), Query Frame = 1
Query:  286 SASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASLGLFDVPVRATGDIPIGDHPAHEDXXXXXXXXXXXXSW*WARN*SGW*FYSFSC*ALVHVLSGFFGPPPFILDLVLPARGVVCFDTLLGGPFFRLLGDTFGCALLFRSVAGV 786
            +A  SS +   R   V R T ET+V + +N+DGSG  +  T IPFLDHML QL++ GL D+ ++A GD+ I DH  +ED                        F++    ALV V+  F G P     L LP   +  ++T L   F++ + +     L  R  AG+
Sbjct:    2 TALDSSRLLQPRTASVHRRTGETDVQIHLNLDGSGRHEIDTGIPFLDHMLAQLSTHGLIDLQIKAIGDLHIDDHHTNEDVGITLGQALAQALQDRRGIHRFGHFWAPLDEALVQVVLDFSGRPHLSYGLELPTERIGRYETQLVREFYQAVVNHAQLTLHIRQAAGL 168          
BLAST of EY754041 vs. ExPASy Swiss-Prot
Match: HIS7_SYMTH (Imidazoleglycerol-phosphate dehydratase OS=Symbiobacterium thermophilum GN=hisB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.645e-13
Identity = 54/149 (36.24%), Postives = 69/149 (46.31%), Query Frame = 1
Query:  319 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASLGLFDVPVRATGDIPIGDHPAHEDXXXXXXXXXXXXSW*W-ARN*SGW*FYSFSC*ALVHVLSGFFGPPPFILDLVLPARGVVCFDTLLGGPFFRLLGDTFGCAL 762
            R+G+V R T+ET+++V   +DG+G AD  T +PF DHMLDQ+A   L D+  RA GD+ I  H   ED                 +    G  F  F    L        G P  + D  LPA+ V  FDT L   FFR L    G  L
Sbjct:   15 RVGQVARKTRETDIAVTWRLDGAGRADVDTGVPFFDHMLDQIARHSLTDLTARAVGDLEIDAHHTVEDTGIALGQALRRALGDGRSIRRYGSAFVPFD-ETLAFAAVDVSGRPYLVFDAALPAQKVGNFDTELAEEFFRALAMNAGITL 162          
The following BLAST results are available for this feature:
BLAST of EY754041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
HIS7_STRGG3.896e-1352.86Imidazoleglycerol-phosphate dehydratase OS=Strepto... [more]
HIS7_STRAW3.896e-1354.41Imidazoleglycerol-phosphate dehydratase OS=Strepto... [more]
HIS7_SYNP65.088e-1334.62Imidazoleglycerol-phosphate dehydratase OS=Synecho... [more]
HIS7_SYNE75.088e-1334.62Imidazoleglycerol-phosphate dehydratase OS=Synecho... [more]
HIS7_RHOFD5.088e-1350.65Imidazoleglycerol-phosphate dehydratase OS=Rhodofe... [more]
HIS7_RALEH5.088e-1352.94Imidazoleglycerol-phosphate dehydratase OS=Ralston... [more]
HIS7_POLNA5.088e-1346.84Imidazoleglycerol-phosphate dehydratase OS=Polarom... [more]
HIS7_CUPTR5.088e-1352.94Imidazoleglycerol-phosphate dehydratase OS=Cupriav... [more]
HIS7_SYNJB6.645e-1332.93Imidazoleglycerol-phosphate dehydratase OS=Synecho... [more]
HIS7_SYMTH6.645e-1336.24Imidazoleglycerol-phosphate dehydratase OS=Symbiob... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-010-A03-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY754041 ID=EY754041; Name=EY754041; organism=Citrus sinensis; type=EST; length=803bp
ANAAAAACTCGGCGTTTTAGCAAAAGCCGTGTTCCTGTTGCTACTCTCTC
TGCGACATTGGAAACGATAGTGTGTAAAATGGAGCTCTCGGTCCCAGCTC
GCCTTGTTCGCCTTTCAATCTCGTCCACGTCCTCACGCCGGCTCCTCGTT
AAACCAAAAACCAATCTCTCTCGTAAACTTCTCCCCATCTCCACACAATA
CTGCTCCTCAACGCGCCGCATGAACTCCCTCACAACACCACGCGCCTCTC
TAAACCCAGACGGCGACAGCAAACACAACAACGGGTCCGCCTCAACTTCC
TCTGCCGTCGATTCTGGTCGAATTGGGGAAGTGAAAAGAGTCACGAAAGA
GACCAACGTTTCTGTGAAGATTAACGTCGATGGCTCTGGCGTTGCTGATT
CATCCACTTGCATTCCCTTCCTAGATCACATGCTTGATCAACTGGCTTCG
CTCGGGCTATTTGATGTGCCCGTGAGGGCAACCGGGGACATTCCCATTGG
TGATCATCCTGCCCATGAAGACGTTGGGCTTGCCCTTGGCACCGGCNTTG
TTGGGGGCTCTTGGTGATGGGCAAGGAATTAATCGGGTTGGTGATTTTAC
AGCTTCTCTTGTTGAGCTTTGGTTCATGTTTTGTCGGGTTTTTTTGGACC
GCCCCCTTTTATTTTGGATTTGGTGCTTCCCGCCCGGGGTGTTGTGTGCT
TCGACACTCTTTTGGGTGGGCCCTTTTTCCGTCTTTTAGGGGACACTTTT
GGATGTGCTCTTCTTTTTCGTTCTGTTGCGGGCGTCTGGCTCTCTTCCTT
TGT
back to top