EY727707

Overview
NameEY727707
Unique NameEY727707
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length965
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY727707 vs. ExPASy Swiss-Prot
Match: SUS1_HORVU (Sucrose synthase 1 OS=Hordeum vulgare GN=SS1 PE=1 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 5.614e-84
Identity = 154/212 (72.64%), Postives = 177/212 (83.49%), Query Frame = 3
Query:    3 DLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDQSKPIVFSMARLDHVKNMTGLVECYGKNSRLRELVNLVVVAGYIDVNK-SKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 635
            DLIAMN+ DFIITST+QEIAG+K++VGQYESH AFTLP LYRVVHGIDVFDPKFNIVSPGADM +YFPY+E  KRLTA H  IE+LL+   +NDEH   L D++KPI+FSMARLD VKNMTGLVE YGKN+ L++L NLV+VAG  D  K SKDREE AE ++M+ L++ YKL G  RWI+AQ NR RNGELYRYI DTKGAFVQPAFYEAF
Sbjct:  462 DLIAMNHTDFIITSTFQEIAGSKDSVGQYESHIAFTLPDLYRVVHGIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLKDRNKPIIFSMARLDRVKNMTGLVEMYGKNAHLKDLANLVIVAG--DHGKESKDREEQAEFKRMYSLIEEYKLKGHIRWISAQMNRVRNGELYRYICDTKGAFVQPAFYEAF 671          
BLAST of EY727707 vs. ExPASy Swiss-Prot
Match: SUS1_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 1.633e-83
Identity = 154/212 (72.64%), Postives = 183/212 (86.32%), Query Frame = 3
Query:    3 DLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDQSKPIVFSMARLDHVKNMTGLVECYGKNSRLRELVNLVVVAGYIDVNK-SKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 635
            DLIAMN+ DFIITST+QEIAG+K+TVGQYESH AFT+PGLYRVVHGI+VFDPKFNIVSPGAD+++YF YSE +KRLTA H  I++LL+   +NDEH+  L D++KPI+F+MARLD VKN+TGLVE Y KN RLR LVNLVVV G  D  K SKD EE AE++KM+EL++T+ L+GQFRWI++Q NR RNGELYRYIADTKGAFVQPAFYEAF
Sbjct:  466 DLIAMNHTDFIITSTFQEIAGSKDTVGQYESHMAFTMPGLYRVVHGINVFDPKFNIVSPGADINLYFSYSETEKRLTAFHPEIDELLYSDVENDEHLCVLKDRTKPILFTMARLDRVKNLTGLVEWYAKNPRLRGLVNLVVVGG--DRRKESKDLEEQAEMKKMYELIETHNLNGQFRWISSQMNRVRNGELYRYIADTKGAFVQPAFYEAF 675          
BLAST of EY727707 vs. ExPASy Swiss-Prot
Match: SUSY_ALNGL (Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 1.059e-82
Identity = 153/212 (72.17%), Postives = 182/212 (85.85%), Query Frame = 3
Query:    3 DLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDQSKPIVFSMARLDHVKNMTGLVECYGKNSRLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAF-VQPAFYEAF 635
            DLIAMN+ DFIITST+QEIAG+K+TVGQYESHTAFTLPGLYRVVH + + DPKFNIVSPGADM IYFPY+EK+KRLT+ H  IE+LL+ P +N+EH+  L D++KPI+F+MARLD VKN+TGLVE YGKN+RLRELVNLVVVAG ++  +SKD EE AE+ KMH L++TYKL+GQFRWI++Q NR RNGELYRYIADTKG     PA YEAF
Sbjct:  464 DLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHELCI-DPKFNIVSPGADMSIYFPYTEKEKRLTSFHPEIEELLYSPVENEEHLCVLKDRNKPIIFTMARLDRVKNITGLVEWYGKNTRLRELVNLVVVAGNLE-KESKDNEEKAEMTKMHGLIETYKLNGQFRWISSQMNRVRNGELYRYIADTKGGLCAGPAIYEAF 673          
BLAST of EY727707 vs. ExPASy Swiss-Prot
Match: SUSY_SACOF (Sucrose synthase (Fragment) OS=Saccharum officinarum GN=SUS1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.528e-24
Identity = 66/104 (63.46%), Postives = 74/104 (71.15%), Query Frame = 3
Query:  336 ARLDHVKNMTGLVECYGKNSRLRELVNLVVVAGYIDVNK-SKDREEIAE---IEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 635
            ARLD VKNMTG VE  GK +RLREL N V+VAG  D  K SKDR+E  E    +KM+ L+  YK  G  R I+AQ NR RNGELY+YI DTKGAFVQPA YEAF
Sbjct:    1 ARLDRVKNMTGPVEISGKKARLRELANPVIVAG--DHGKESKDRDEAEEQGGFKKMYSLIDDYKFKGHIRLISAQMNRVRNGELYQYICDTKGAFVQPA-YEAF 101          
BLAST of EY727707 vs. ExPASy Swiss-Prot
Match: SPS_BETVU (Sucrose-phosphate synthase OS=Beta vulgaris GN=SPS PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.732e-12
Identity = 59/217 (27.19%), Postives = 99/217 (45.62%), Query Frame = 3
Query:    9 IAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV---FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQND-----EHVGTLSDQSKPIVFSMARLDHVKNMTGLVECYGKNSRLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 635
            ++++ ++ +ITST QEI    +    ++      L    R+  G+     F P+  ++ PG + +   P+         + G  E+    P   D     E +   S   KP++ ++AR D  KN+T LV+ +G+   LREL NL ++ G  D          + +  + +L+  Y L GQ  +      +A   E+YR  A TKG F+ PAF E F
Sbjct:  371 LSLDASEIVITSTRQEIEEQWHLYDGFDPVLERKLRA--RMKRGVSCYGRFMPRMVVIPPGMEFNHIVPHEGD------MDGETEETEEHPTSPDPPIWAEIMRFFSKPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSSSVLLSVLKLIDQYDLYGQVAY-PKHHKQADVPEIYRLAAKTKGVFINPAFIEPF 578          
BLAST of EY727707 vs. ExPASy Swiss-Prot
Match: SPS_SOLTU (Sucrose-phosphate synthase OS=Solanum tuberosum GN=SPS PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.277e-11
Identity = 57/210 (27.14%), Postives = 96/210 (45.71%), Query Frame = 3
Query:    9 IAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPG-LYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDQSKPIVFSMARLDHVKNMTGLVECYGKNSRLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 635
            + ++ ++ +ITST QEI         ++      L   + R V     F P+  ++ PG +     P+       T   GS +    DP    E +   S+  KP++ ++AR D  KN+T LV+ +G+   LR+L NL ++ G  D          A +  + +++  Y L GQ  +      ++   ++YR  A TKG F+ PAF E F
Sbjct:  372 LTLDASEIVITSTRQEIDEQWRLYDGFDPILERKLRARIKRNVSCYGRFMPRMAVIPPGMEFHHIVPHEGDMDGET--EGSEDGKTPDPPIWAEIMRFFSNPRKPMILALARPDPKKNLTTLVKAFGECRPLRDLANLTLIMGNRDNIDEMSSTNSALLLSILKMIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPF 578          
BLAST of EY727707 vs. ExPASy Swiss-Prot
Match: SPS_VICFA (Sucrose-phosphate synthase OS=Vicia faba GN=SPS PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.178e-11
Identity = 58/219 (26.48%), Postives = 98/219 (44.75%), Query Frame = 3
Query:    9 IAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPG-LYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQ----LLFDPEQNDEHVGT-----LSDQSKPIVFSMARLDHVKNMTGLVECYGKNSRLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 635
            +A++  + +ITST QEI         ++      +   + R V     + P+ +++ PG +     P          L G IE     +L  P   D  + +      S+  KP++ ++AR D  KN+T LV+ +G+   LREL NL ++ G  D          + +  + +L+  Y L GQ  +      ++   ++YR  A TKG F+ PAF E F
Sbjct:  374 LALDGTEIVITSTRQEIEEQWRLYNGFDPVLERKIRARIRRNVSCYGRYMPRMSVIPPGMEFHHIAP----------LDGDIETEPEGILDHPAPQDPPIWSEIMRFFSNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSSSVLLSVLKLIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPF 581          
BLAST of EY727707 vs. ExPASy Swiss-Prot
Match: SPS1_CITUN (Sucrose-phosphate synthase 1 OS=Citrus unshiu GN=SPS1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.715e-11
Identity = 58/211 (27.49%), Postives = 96/211 (45.50%), Query Frame = 3
Query:    9 IAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPG-LYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLF-DPEQNDEHVGTLSDQSKPIVFSMARLDHVKNMTGLVECYGKNSRLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 635
            ++++ ++ +ITST QEI         ++      L   + R V     F P+  I+ PG +     P        T   G+ +     DP    E +   ++  KP++ ++AR D  KN+T LV+ +G+   LREL NL ++ G  D          + +  + +L+  Y L GQ  +      ++   E+YR  A TKG F+ PAF E F
Sbjct:  373 LSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGET--EGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY-PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPF 580          
The following BLAST results are available for this feature:
BLAST of EY727707 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
SUS1_HORVU5.614e-8472.64Sucrose synthase 1 OS=Hordeum vulgare GN=SS1 PE=1 ... [more]
SUS1_SOLTU1.633e-8372.64Sucrose synthase OS=Solanum tuberosum PE=2 SV=1[more]
SUSY_ALNGL1.059e-8272.17Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 S... [more]
SUSY_SACOF6.528e-2463.46Sucrose synthase (Fragment) OS=Saccharum officinar... [more]
SPS_BETVU5.732e-1227.19Sucrose-phosphate synthase OS=Beta vulgaris GN=SPS... [more]
SPS_SOLTU1.277e-1127.14Sucrose-phosphate synthase OS=Solanum tuberosum GN... [more]
SPS_VICFA2.178e-1126.48Sucrose-phosphate synthase OS=Vicia faba GN=SPS PE... [more]
SPS1_CITUN3.715e-1127.49Sucrose-phosphate synthase 1 OS=Citrus unshiu GN=S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-104-F05-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727707 ID=EY727707; Name=EY727707; organism=Citrus sinensis; type=EST; length=965bp
CTGACCTGATAGCCATGAACAATGCAGATTTTATCATCACCAGTACATAC
CAAGAGATTGCCGGAACGAAAAATACTGTTGGTCAGTATGAGAGCCACAC
TGCATTCACTCTTCCAGGCTTATATCGAGTTGTTCATGGCATTGATGTTT
TTGATCCGAAGTTCAATATTGTGTCCCCGGGGGCAGACATGGACATTTAT
TTCCCATACTCTGAAAAGCAGAAAAGACTCACAGCCCTACATGGTTCTAT
AGAACAGTTGCTGTTTGATCCTGAACAGAATGATGAGCATGTTGGTACAT
TGAGTGATCAGTCGAAGCCCATTGTCTTTTCCATGGCGAGGCTTGACCAT
GTGAAAAACATGACAGGGTTGGTTGAGTGCTATGGTAAGAATAGCCGACT
GAGGGAACTGGTTAACCTTGTAGTGGTAGCTGGTTACATAGATGTAAATA
AGTCCAAAGACAGAGAAGAGATAGCAGAAATTGAGAAGATGCATGAGCTT
ATGAAGACGTACAAGTTGGATGGTCAGTTTCGTTGGATAGCAGCTCAAAC
AAATAGGGCACGTAATGGCGAGCTCTATCGCTATATAGCCGACACCAAAG
GGGCTTTTGTGCAACCTGCTTTTTATGAAGCTTTTGAATAACAGTTGTGG
AAACTAAGACTTGGGGACTTCCAACTTTCCCCCTTGCCTTGGTGGTCCCT
GCAAAAATTATCCAAGCAGGGGGCCGTCAGGTTCCCTATTTGATCCCAAA
TCACCCCGAATCAAGCCGGCTGAAACTCTGGGCAAAATTTTCTTTTGGAA
AGGGGGAAGGGAAAATTCCAACCCCTTTGGAAAAAAAAATTCTCTGAAAG
GGGGGGGGGTTAAAAAAGGGATTTTTTTAAAAAGGGGAACCCCCGGGGAA
AAAAATTTTTTTTCCTGAAAAAGGGGGTAAAAAGAAGCAATTTTTGGGGG
GGGGGGGGGGGGAAA
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