EY727705
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY727705 vs. ExPASy Swiss-Prot
Match: HMCS_YEAST (Hydroxymethylglutaryl-CoA synthase OS=Saccharomyces cerevisiae GN=ERG13 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.135e-28 Identity = 53/96 (55.21%), Postives = 70/96 (72.92%), Query Frame = 2 Query: 257 KAMAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVINKSKSIKT 544 K +NVGI + IY P CV Q LE DG S+GKYTIGLGQ M+F ++ ED+ SMSLT ++ L++ Y ID +IGRLEVG+ET+I+KSKS+K+ Sbjct: 43 KTRPQNVGIKGIQIYIPTQCVNQSELEKFDGVSQGKYTIGLGQTNMSFVNDREDIYSMSLTVLSKLIKSYNIDTNKIGRLEVGTETLIDKSKSVKS 138 HSP 2 Score: 36.965 bits (84), Expect = 3.135e-28 Identity = 19/52 (36.54%), Postives = 32/52 (61.54%), Query Frame = 3 Query: 525 RANPLRLFLMQIFENFGNTDIEGVDSTHACLRRTGGLFYWGNGVKSISGNGR 680 ++ ++ LMQ+F NTD+EG+D+ +AC T LF N ++S + +GR Sbjct: 132 KSKSVKSVLMQLFGE--NTDVEGIDTLNACYGGTNALFNSLNWIESNAWDGR 181
BLAST of EY727705 vs. ExPASy Swiss-Prot
Match: HMCS2_RAT (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus GN=Hmgcs2 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 4.079e-28 Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 2 Query: 269 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVINKSKSIKT 544 K+VGILA+++YFP V Q LE + GKYT+GLGQ M FCS ED+ S+ LT V L+E+ K+ +GRLEVG+ET+I+KSK++KT Sbjct: 52 KDVGILALEVYFPAQYVDQTDLEKFNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRLMERTKLPWDAVGRLEVGTETIIDKSKAVKT 143 HSP 2 Score: 47.3654 bits (111), Expect = 4.079e-28 Identity = 21/52 (40.38%), Postives = 35/52 (67.31%), Query Frame = 3 Query: 525 RANPLRLFLMQIFENFGNTDIEGVDSTHACLRRTGGLFYWGNGVKSISGNGR 680 ++ ++ LM++F++ GNTDIEG+D+T+AC T LF N ++S +GR Sbjct: 137 KSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSYWDGR 188
BLAST of EY727705 vs. ExPASy Swiss-Prot
Match: HMCS2_MOUSE (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Mus musculus GN=Hmgcs2 PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 4.079e-28 Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 2 Query: 269 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVINKSKSIKT 544 K+VGILA+++YFP V Q LE + GKYT+GLGQ M FCS ED+ S+ LT V L+E+ K+ +GRLEVG+ET+I+KSK++KT Sbjct: 52 KDVGILALEVYFPAQYVDQTDLEKFNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRLMERTKLPWDAVGRLEVGTETIIDKSKAVKT 143 HSP 2 Score: 47.3654 bits (111), Expect = 4.079e-28 Identity = 21/52 (40.38%), Postives = 35/52 (67.31%), Query Frame = 3 Query: 525 RANPLRLFLMQIFENFGNTDIEGVDSTHACLRRTGGLFYWGNGVKSISGNGR 680 ++ ++ LM++F++ GNTDIEG+D+T+AC T LF N ++S +GR Sbjct: 137 KSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSYWDGR 188
BLAST of EY727705 vs. ExPASy Swiss-Prot
Match: HMCS2_PIG (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Sus scrofa GN=HMGCS2 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 4.079e-28 Identity = 47/92 (51.09%), Postives = 64/92 (69.57%), Query Frame = 2 Query: 269 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVINKSKSIKT 544 K+VGILA+++YFP V Q LE D G+YT+GLGQ M FCS ED+ S+ LT V L+E+ ++ +G LEVG+ET+I+KSKS+KT Sbjct: 52 KDVGILALEVYFPAQYVDQTDLEKFDNVEAGRYTVGLGQTHMGFCSVQEDINSLCLTVVQRLMERTQLPWDSVGWLEVGTETIIDKSKSVKT 143 HSP 2 Score: 49.6766 bits (117), Expect = 4.079e-28 Identity = 22/52 (42.31%), Postives = 36/52 (69.23%), Query Frame = 3 Query: 525 RANPLRLFLMQIFENFGNTDIEGVDSTHACLRRTGGLFYWGNGVKSISGNGR 680 ++ ++ LM++F++ GNTDIEG+D+T+AC T LF N V+S + +GR Sbjct: 137 KSKSVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWVESSAWDGR 188
BLAST of EY727705 vs. ExPASy Swiss-Prot
Match: HMCS1_BLAGE (Hydroxymethylglutaryl-CoA synthase 1 OS=Blattella germanica GN=HMGCS-1 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 9.676e-27 Identity = 48/91 (52.75%), Postives = 68/91 (74.73%), Query Frame = 2 Query: 272 NVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVINKSKSIKT 544 +VGI+A+++ FP V Q LE +D S GKYT+GLGQ M FC++ ED+ S+ LT V+ L+E++ I QIGRLEVG+ET+++KSKS+KT Sbjct: 5 DVGIVALELIFPSQYVDQVDLEVYDNVSAGKYTVGLGQARMGFCTDREDINSLCLTVVSRLMERWSIPYSQIGRLEVGTETLLDKSKSVKT 95 HSP 2 Score: 40.4318 bits (93), Expect = 9.676e-27 Identity = 27/68 (39.71%), Postives = 39/68 (57.35%), Query Frame = 3 Query: 525 RANPLRLFLMQIFENFGNTDIEGVDSTHACLRRTGGLFYWGNGVKSISGNGRLGPRWGSRTWGVYAKG 728 ++ ++ LMQ+F++ NTDIEGVD+ +AC T LF + V+S S +GR VYAKG Sbjct: 89 KSKSVKTVLMQLFKD--NTDIEGVDTVNACYGGTSALFNAISWVESSSWDGRYALVVAGDI-AVYAKG 153
BLAST of EY727705 vs. ExPASy Swiss-Prot
Match: HMCS2_BLAGE (Hydroxymethylglutaryl-CoA synthase 2 OS=Blattella germanica GN=HMGCS-2 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 3.616e-26 Identity = 45/92 (48.91%), Postives = 65/92 (70.65%), Query Frame = 2 Query: 269 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVINKSKSIKT 544 ++VGI+ +++ FP V Q LE +D S GKYT+GLGQ+ M C++ ED+ S+ LTAV L+E+ ID IG LEVG+ET+++K KS+KT Sbjct: 6 EDVGIIGIEMIFPSLYVDQAELETYDEVSPGKYTMGLGQDKMGVCTDREDINSLCLTAVDKLMERNNIDYNDIGWLEVGTETILDKVKSVKT 97 HSP 2 Score: 46.9802 bits (110), Expect = 3.616e-26 Identity = 22/52 (42.31%), Postives = 33/52 (63.46%), Query Frame = 3 Query: 525 RANPLRLFLMQIFENFGNTDIEGVDSTHACLRRTGGLFYWGNGVKSISGNGR 680 + ++ LMQ+FE GNTD+EG+D+ +AC R T LF ++S S +GR Sbjct: 91 KVKSVKTVLMQLFEESGNTDVEGIDTINACYRGTAALFNALIWIESSSWDGR 142
BLAST of EY727705 vs. ExPASy Swiss-Prot
Match: HMCS_SCHPO (Hydroxymethylglutaryl-CoA synthase OS=Schizosaccharomyces pombe GN=hcs1 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.544e-25 Identity = 51/92 (55.43%), Postives = 70/92 (76.09%), Query Frame = 2 Query: 269 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVINKSKSIKT 544 K++GI + +Y P V+Q ALEAHDG S GKYTIGLG MAF + ED+ S LTA++ L+++Y+ID +IGRLEVG+ET+I+KSKS+K+ Sbjct: 6 KDIGIKGLVLYTPNQYVEQAALEAHDGVSTGKYTIGLGLTKMAFVDDREDIYSFGLTALSQLIKRYQIDISKIGRLEVGTETIIDKSKSVKS 97 HSP 2 Score: 30.0314 bits (66), Expect = 8.544e-25 Identity = 16/54 (29.63%), Postives = 31/54 (57.41%), Query Frame = 3 Query: 525 RANPLRLFLMQIFENFGNTDIEGVDSTHACLRRTGGLFYWGNGVKSISGNGRLG 686 ++ ++ LMQ+F + N ++EG+D +AC LF + ++S + +GR G Sbjct: 91 KSKSVKSVLMQLFGD--NHNVEGIDCVNACYGGVNALFNTIDWIESSAWDGRDG 142
BLAST of EY727705 vs. ExPASy Swiss-Prot
Match: HMCSB_DICDI (Hydroxymethylglutaryl-CoA synthase B OS=Dictyostelium discoideum GN=hgsB PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 2.169e-23 Identity = 53/101 (52.48%), Postives = 75/101 (74.26%), Query Frame = 2 Query: 269 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVINKSKSIKTFFDANF*EF 571 K++GI A+DIYFP T V Q L+ +D S GKYTIGLGQ M+F + ED++SM++T+V ++ KY ID + IGRLEVG+ET+I+KSKS+K+ + F E+ Sbjct: 5 KDIGICAIDIYFPQTYVNQSELKKYDKVSNGKYTIGLGQTNMSFVGDREDIVSMAMTSVKMMMSKYSIDYQSIGRLEVGTETIIDKSKSVKSSIMSLFQEY 105
BLAST of EY727705 vs. ExPASy Swiss-Prot
Match: HMCS_CAEEL (Hydroxymethylglutaryl-CoA synthase OS=Caenorhabditis elegans GN=F25B4.6 PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 7.511e-23 Identity = 50/91 (54.95%), Postives = 65/91 (71.43%), Query Frame = 2 Query: 272 NVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVINKSKSIKT 544 +VGI A+++YFP V Q LE + S GKYTIGLGQ+ M FCS+ ED++S+SLT L+E YKI IG L VG+ET+I+KSKS+KT Sbjct: 13 DVGIGAIELYFPQNFVDQNDLEKFNNVSSGKYTIGLGQQQMGFCSDNEDIVSISLTVTRKLIETYKISTDSIGCLVVGTETMIDKSKSVKT 103 HSP 2 Score: 27.7202 bits (60), Expect = 7.511e-23 Identity = 13/30 (43.33%), Postives = 20/30 (66.67%), Query Frame = 3 Query: 525 RANPLRLFLMQIFENFGNTDIEGVDSTHAC 614 ++ ++ LM +F GN+DIEGVD +AC Sbjct: 97 KSKSVKTALMDLFP--GNSDIEGVDIKNAC 124 The following BLAST results are available for this feature:
BLAST of EY727705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >EY727705 ID=EY727705; Name=EY727705; organism=Citrus sinensis; type=EST; length=1059bpback to top |