EY753982

Overview
NameEY753982
Unique NameEY753982
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753982 vs. ExPASy Swiss-Prot
Match: DHSAA_XENLA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit A, mitochondrial OS=Xenopus laevis GN=sdha-A PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.582e-11
Identity = 52/170 (30.59%), Postives = 81/170 (47.65%), Query Frame = 3
Query:   60 VRALYVAGEVACTGLHGANRLASNSLLEALVFARR-AVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGRNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAKWRIDKLEAEWETY-LFEHG--WEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDF 557
            V  LY  GE A   +HGANRL +NSLL+ +VF R  A+  +   K   ++     N    +V   +L +    N   RT E+R  +Q  M  +  + R+ + L+    ++  + +  +    F+ G  W    V  E  E++NL  CA   ++ A AR ESRG H   D+
Sbjct:  435 VPGLYSCGEAASASVHGANRLGANSLLDLVVFGRACALSIAESCKPGEAVPSIKENAGEESVA--NLDKLRYANGSTRTSEIRINMQKTMQNHAAVFRTGSVLKEGCEKLSVINSSMDDIKTFDRGIVWNTDLV--ETLELQNLMLCALQTINGAEARKESRGAHAREDY 600          
BLAST of EY753982 vs. ExPASy Swiss-Prot
Match: DHSA_RICFE (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia felis GN=sdhA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.405e-11
Identity = 55/187 (29.41%), Postives = 82/187 (43.85%), Query Frame = 3
Query:   30 VRAGLQGXTNVRALYVAGEVACTGLHGANRLASNSLLEALVFARRA-------VQPSIDHKKSTSIDLSASNWWTRTVVPKSLGRNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAKWRIDKLEAEWETYLFEHG---WEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFP 560
            ++ G    + V+ L   GE AC  +HGANRL SNSLL+ +VF R +       + P+  HK      L       + +      R+   NIL    ++R ++Q  M  +  + R+   L      I ++   ++          W    V  EA E+ NL   A + V SA AR ESRG H   D+P
Sbjct:  373 IKDGTNHNSVVKGLMAIGEAACVSVHGANRLGSNSLLDLVVFGRSSALKAAELISPASPHKPIKEASLE------KIINRFDKVRHANGNIL--VADLRLKMQRTMQSHASVFRTQEVLDEGAGMISEIRNGYKDIKINDKSLIWNSDLV--EALELDNLLDQALVTVYSAAARKESRGAHAREDYP 549          
BLAST of EY753982 vs. ExPASy Swiss-Prot
Match: DHSA_ORYSJ (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Oryza sativa subsp. japonica GN=SDH1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.405e-11
Identity = 54/174 (31.03%), Postives = 83/174 (47.70%), Query Frame = 3
Query:   60 VRALYVAGEVACTGLHGANRLASNSLLEALVFAR----RAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGRNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAKWRIDKLEAEWETYLFEHGWEQTFVG----LEACEMRNLFCCAKLVVSSALARHESRGLHYMVDF 557
            V  L  AGE AC  +HGANRL +NSLL+ +VF R    R  + +   +K   +  SA     +T+      RN   ++   T ++R  +Q +M     + R+  +L+     I K    WE+Y      +++ +     +E  E+ NL   A + + SA AR ESRG H   DF
Sbjct:  418 VPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAETAKPGEKQKPLQKSAGE---KTIAWLDKLRNANGSL--PTSKIRLNMQRVMQNNAAVFRTQETLEEGCKLITK---AWESYHDVKISDRSLIWNSDLIETIELENLLINACITMHSAEARKESRGAHAREDF 583          
BLAST of EY753982 vs. ExPASy Swiss-Prot
Match: FRDA_HELPJ (Fumarate reductase flavoprotein subunit OS=Helicobacter pylori J99 GN=frdA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.753e-11
Identity = 52/191 (27.23%), Postives = 86/191 (45.03%), Query Frame = 3
Query:   30 VRAGLQGXTNVRALYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGRNVMHNILRR-----TKEVRKELQSIMWRYVGIVRSTTSLQTAKWRIDKLEAEWETYLFEHGWEQTFVGLE-ACEMRNLFCCAKLVVSSALARHESRGLHYMVDFPHVEENKRL 584
            VR   +G T+++ L+ AGE AC  LHG NRL  NS+ E +V           H     I+++         + +S  ++ MH +L         E+R+ ++ +M   VG+ R    L+ A   + +L A  +    ++        LE A   + +   A  +   AL R ESRG H  +D+P  ++ K L
Sbjct:  402 VRTNPKGETHLKGLFCAGEAACWDLHGFNRLGGNSVSEPVVAGMIIGDYFASHCLEAQIEINTQK--VEAFIKES--QDYMHFLLHNEGKEDVYEIRERMKEVMDEKVGVFREGKKLEEALKELQELYARSKNICVKNKVLHNNPELEDAYRTKKMLKLALCITQGALLRTESRGAHTRIDYPKRDDEKWL 588          
BLAST of EY753982 vs. ExPASy Swiss-Prot
Match: FRDA_HAEIN (Fumarate reductase flavoprotein subunit OS=Haemophilus influenzae GN=frdA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.753e-11
Identity = 54/190 (28.42%), Postives = 90/190 (47.37%), Query Frame = 3
Query:   18 PTRPV--------RAGLQGXTNVRALYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHK-KSTSIDLSASNWWTRTVVPKSLGRNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAKWRIDKLEAEWETY-LFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDF 557
            P RPV               T ++ L+  GE A +GLHGANRL SNSL E +V  R A + +     ++ S++ SA +   + VV +    +          E+R E+ ++M    GI R   S+Q A  +I +L+  ++   + ++        L   E+  +   A+ + +SA+ R ESRG H  +D+
Sbjct:  351 PVRPVVHYTMGGIEVDFNSETRIKGLFAVGECASSGLHGANRLGSNSLAELVVLGRVAGEYAAQRAVEAQSVNQSAVDAQAKDVVARLEALHKQEG-NESWSEIRDEMGTVMEEGCGIYRDQASMQKAVDKIAELKERYKRIRVSDNSSVFNTDVLYTVELGYILDVAQSIANSAIERKESRGAHQRLDY 539          
BLAST of EY753982 vs. ExPASy Swiss-Prot
Match: NADB_LISMO (L-aspartate oxidase OS=Listeria monocytogenes GN=nadB PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.513e-11
Identity = 57/172 (33.14%), Postives = 77/172 (44.77%), Query Frame = 3
Query:   30 VRAGLQGXTNVRALYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGRNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSL-QTAKWRIDKLEAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLH 542
            +R  L G TN+  LY  GEVA  G+HGANRLASNSLLE LVF  + V   I  +K   ID           +P S      + I       ++ LQ  +W  +GI R    + +   W  D          F++         +  E+ ++   AKL+  SAL R ES G H
Sbjct:  334 IRTDLSGKTNIPGLYAIGEVANAGVHGANRLASNSLLETLVFGEK-VAEYIRTQKINPID--------HPEIPLS------NQIQTPHLPDKQLLQEKIWETLGITRKPEKITEFLHWLTD----------FDYANHTR----KTAEISHMLITAKLIAESALKRTESLGAH 476          
BLAST of EY753982 vs. ExPASy Swiss-Prot
Match: DHSA_XENTR (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Xenopus tropicalis GN=sdha PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.513e-11
Identity = 52/170 (30.59%), Postives = 79/170 (46.47%), Query Frame = 3
Query:   60 VRALYVAGEVACTGLHGANRLASNSLLEALVFARR-AVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGRNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAKWRIDKLEAEWETY-LFEHG--WEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDF 557
            V  LY  GE A   +HGANRL +NSLL+ +VF R  A+  +   K    +     N    +V   +L +    N   RT E+R  +Q  M  +  + R+ + L+    ++  + +  +    F+ G  W    V  E  E++NL  CA   +  A AR ESRG H   D+
Sbjct:  435 VPGLYACGEAASASVHGANRLGANSLLDLVVFGRACALSIAESCKPGEPVPSIKENAGEESVA--NLDKLRFTNGSTRTSELRINMQKTMQNHAAVFRTGSVLKEGCEKLSAINSTMDDIKTFDRGIVWNTDLV--ETLELQNLMLCALQTIYGAEARKESRGAHAREDY 600          
BLAST of EY753982 vs. ExPASy Swiss-Prot
Match: DHSA_RICBR (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia bellii (strain RML369-C) GN=sdhA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.513e-11
Identity = 54/181 (29.83%), Postives = 82/181 (45.30%), Query Frame = 3
Query:   30 VRAGLQGXTNVRALYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPK-SLGRNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAKWRIDKLEAEWETYLFEHG---WEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFP 560
            ++ G    + V+ L   GE AC  +HGANRL SNSLL+ +VF R A   + +  K  S     S      ++ +    R+   NI     ++R ++Q  M  +  + R+   L      I ++ + ++          W    V  EA E+ NL   A + V SA AR ESRG H   D+P
Sbjct:  373 IKDGKNHNSVVKGLMSIGEAACVSVHGANRLGSNSLLDLVVFGRSAALKAAELIKPASPHKPVSEEALEKIISRFDKIRHSSGNI--SVADLRLKMQRTMQSHASVFRTQEVLDEGAEMISEIRSGYKDIKVNDKSLIWNSDLV--EALELDNLLDQALVTVYSAAARKESRGAHAREDYP 549          
BLAST of EY753982 vs. ExPASy Swiss-Prot
Match: DHSA_RICTY (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia typhi GN=sdhA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.813e-11
Identity = 52/181 (28.73%), Postives = 81/181 (44.75%), Query Frame = 3
Query:   30 VRAGLQGXTNVRALYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPK-SLGRNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAKWRIDKLEAEWETYLFEHG---WEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFP 560
            ++ G    + V  +   GE AC  +HGANRL SNSLL+ +VF R +   + +  K  S            ++ +    R+   N+L    ++R ++Q  M  +V + R+   L      I ++   ++          W    V  EA E+ NL   A + V SA AR ESRG H   D+P
Sbjct:  373 IKDGKNHNSIVNGIMAIGEAACVSVHGANRLGSNSLLDLVVFGRSSALKAAELIKPVSPHKPLKKEILEKIINRFDKIRHANGNVL--VADLRLQMQRTMQSHVSVFRTQELLDEGARMISEIRNRYKDIKINDKSLIWNSDLV--EALELDNLLDQALVTVYSAAARKESRGAHAREDYP 549          
BLAST of EY753982 vs. ExPASy Swiss-Prot
Match: DHSA_RICPR (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia prowazekii GN=sdhA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.813e-11
Identity = 53/181 (29.28%), Postives = 80/181 (44.20%), Query Frame = 3
Query:   30 VRAGLQGXTNVRALYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPK-SLGRNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAKWRIDKLEAEWETYLFEHG---WEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFP 560
            ++ G    + V  +   GE AC  +HGANRL SNSLL+ +VF R +   + +  K  S            ++ +    R    NIL    ++R ++Q  M  +V + R+   L      I ++   ++          W    V  EA E+ NL   A + V SA AR ESRG H   D+P
Sbjct:  373 IKDGKNHNSIVNGIMAIGEAACVSVHGANRLGSNSLLDLVVFGRSSALKAAELIKPASPHKPLQKETLEKIINRFDKVRYANGNIL--VADLRLKMQRTMQSHVSVFRTQKLLDEGVGMISEIRNRYKDIKINDKSLIWNSDLV--EALELDNLLDQALVTVCSAAARKESRGAHAREDYP 549          
The following BLAST results are available for this feature:
BLAST of EY753982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
DHSAA_XENLA2.582e-1130.59Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
DHSA_RICFE4.405e-1129.41Succinate dehydrogenase flavoprotein subunit OS=Ri... [more]
DHSA_ORYSJ4.405e-1131.03Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
FRDA_HELPJ5.753e-1127.23Fumarate reductase flavoprotein subunit OS=Helicob... [more]
FRDA_HAEIN5.753e-1128.42Fumarate reductase flavoprotein subunit OS=Haemoph... [more]
NADB_LISMO7.513e-1133.14L-aspartate oxidase OS=Listeria monocytogenes GN=n... [more]
DHSA_XENTR7.513e-1130.59Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
DHSA_RICBR7.513e-1129.83Succinate dehydrogenase flavoprotein subunit OS=Ri... [more]
DHSA_RICTY9.813e-1128.73Succinate dehydrogenase flavoprotein subunit OS=Ri... [more]
DHSA_RICPR9.813e-1129.28Succinate dehydrogenase flavoprotein subunit OS=Ri... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-009-B10-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753982 ID=EY753982; Name=EY753982; organism=Citrus sinensis; type=EST; length=765bp
CGGNATTCCAAAACCGACCCACGCGTCCGGTCCGTGCTGGTCTCCAGGGG
NAAACAAATGTGCGAGCCCTGTATGTAGCAGGTGAGGTTGCATGTACAGG
TTTGCACGGAGCAAACCGATTAGCCAGCAATTCATTGCTTGAGGCATTAG
TTTTTGCACGAAGAGCTGTCCAGCCCTCAATTGATCACAAGAAGAGCACT
AGCATTGATCTCAGTGCTTCAAATTGGTGGACCCGAACTGTTGTACCAAA
GTCACTTGGCCGTAATGTAATGCACAATATTTTGAGAAGGACAAAGGAAG
TGCGGAAAGAACTGCAGTCAATCATGTGGAGGTATGTGGGAATTGTTCGG
TCTACAACGAGTCTACAAACTGCAAAATGGAGAATTGATAAGTTGGAAGC
TGAATGGGAGACATACTTGTTTGAGCATGGCTGGGAGCAGACATTTGTGG
GCCTTGAGGCTTGTGAAATGAGGAACCTCTTTTGTTGTGCAAAGTTGGTG
GTCAGCAGTGCTCTTGCTAGGCATGAAAGCCGTGGACTTCATTACATGGT
TGATTTTCCGCATGTTGAGGAAAATAAAAGGCTGCCAACAANNATTCTCC
CTTCACTTGTAAATTGCACATGGAGTTCGAGACAACTACATAAGTTGCCT
GTATGTTAAGGTAAATGCAAGGATCTGTTTCTTGCCCTGGATTTGACTAA
ATGGTTTTGAAGTGGTTTTTCTTAGCTAGCCATTTGAGTTCAAATTAAAA
AAAAAAAAAAAAAAA
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